RNA–Protein interactions for RNA: ENST00000492844.1

LYST-212, Transcript of lysosomal trafficking regulator, humanhuman

TSL 3

Gene LYST, Length 452 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-212ENST00000492844 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
LYST-212ENST00000492844 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
LYST-212ENST00000492844 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
LYST-212ENST00000492844 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
LYST-212ENST00000492844 FOXD1Q16676 465 aa12.27□□□□□ -0.45
LYST-212ENST00000492844 PLPPR3Q6T4P5 718 aa12.07□□□□□ -0.48
LYST-212ENST00000492844 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
LYST-212ENST00000492844 ADRA2BP18089 450 aa11.77□□□□□ -0.53
LYST-212ENST00000492844 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
LYST-212ENST00000492844 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
LYST-212ENST00000492844 MSH5O43196 834 aa11.43□□□□□ -0.58
LYST-212ENST00000492844 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
LYST-212ENST00000492844 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.69
LYST-212ENST00000492844 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
LYST-212ENST00000492844 DMRT2Q9Y5R5 561 aa10.44□□□□□ -0.74
LYST-212ENST00000492844 KCNA4P22459 653 aa10.42□□□□□ -0.74
LYST-212ENST00000492844 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
LYST-212ENST00000492844 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
LYST-212ENST00000492844 NCBP3Q53F19 620 aaKnown RBP10.26□□□□□ -0.77
LYST-212ENST00000492844 HOXD11P31277 338 aaPredicted RBP10.18□□□□□ -0.78
LYST-212ENST00000492844 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
LYST-212ENST00000492844 DCAF8L1A6NGE4 600 aa10.05□□□□□ -0.8
LYST-212ENST00000492844 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
LYST-212ENST00000492844 SLC4A1APQ9BWU0 796 aaKnown RBP9.82□□□□□ -0.84
LYST-212ENST00000492844 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
LYST-212ENST00000492844 SLC4A2P04920 1241 aa9.77□□□□□ -0.85
LYST-212ENST00000492844 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
LYST-212ENST00000492844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.86
LYST-212ENST00000492844 ZBTB22O15209 634 aa9.64□□□□□ -0.87
LYST-212ENST00000492844 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
LYST-212ENST00000492844 C1QBPQ07021 282 aaKnown RBP9.59□□□□□ -0.87
LYST-212ENST00000492844 EHMT2Q96KQ7 1210 aa9.53□□□□□ -0.88
LYST-212ENST00000492844 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
LYST-212ENST00000492844 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
LYST-212ENST00000492844 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
LYST-212ENST00000492844 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
LYST-212ENST00000492844 ATF5Q9Y2D1 282 aaPredicted RBP9.36□□□□□ -0.91
LYST-212ENST00000492844 CAPN15O75808 1086 aa9.29□□□□□ -0.92
LYST-212ENST00000492844 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
LYST-212ENST00000492844 SAMD1Q6SPF0 538 aaPredicted RBP9.26□□□□□ -0.93
LYST-212ENST00000492844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.24□□□□□ -0.93
LYST-212ENST00000492844 HNRNPUL2Q1KMD3 747 aaKnown RBP9.24□□□□□ -0.93
LYST-212ENST00000492844 ABCB7O75027 752 aa9.19□□□□□ -0.94
LYST-212ENST00000492844 DSG3P32926 999 aa9.18□□□□□ -0.94
LYST-212ENST00000492844 APLP2Q06481 763 aa9.11□□□□□ -0.95
LYST-212ENST00000492844 ZNF219Q9P2Y4 722 aaPredicted RBP9.11□□□□□ -0.95
LYST-212ENST00000492844 ATXN8OSP0DMR3 200 aa9.1□□□□□ -0.95
LYST-212ENST00000492844 POLA2Q14181 598 aa9.1□□□□□ -0.95
LYST-212ENST00000492844 POTEHQ6S545 545 aa8.92□□□□□ -0.98
LYST-212ENST00000492844 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
LYST-212ENST00000492844 OSCARQ8IYS5 282 aa8.79□□□□□ -1
LYST-212ENST00000492844 FBLN2P98095 1184 aa8.73□□□□□ -1.01
LYST-212ENST00000492844 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
LYST-212ENST00000492844 RBM42Q9BTD8 480 aaKnown RBP8.65□□□□□ -1.02
LYST-212ENST00000492844 ZNF692Q9BU19 519 aaPredicted RBP8.59□□□□□ -1.03
LYST-212ENST00000492844 SPDYE2BA6NHP3 402 aa8.56□□□□□ -1.04
LYST-212ENST00000492844 SPDYE6P0CI01 402 aa8.56□□□□□ -1.04
LYST-212ENST00000492844 SPDYE2Q495Y8 402 aa8.56□□□□□ -1.04
LYST-212ENST00000492844 SPDYE4A6NLX3 237 aa8.55□□□□□ -1.04
LYST-212ENST00000492844 SSUH2Q9Y2M2 353 aa8.54□□□□□ -1.04
LYST-212ENST00000492844 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
LYST-212ENST00000492844 REM2Q8IYK8 340 aaPredicted RBP8.53□□□□□ -1.04
LYST-212ENST00000492844 AKT1S1Q96B36 256 aa8.53□□□□□ -1.04
LYST-212ENST00000492844 FKBP8Q14318 412 aa8.52□□□□□ -1.05
LYST-212ENST00000492844 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
LYST-212ENST00000492844 PITPNM1O00562 1244 aa8.45□□□□□ -1.06
LYST-212ENST00000492844 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
LYST-212ENST00000492844 PROM2Q8N271 834 aa8.38□□□□□ -1.07
LYST-212ENST00000492844 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
LYST-212ENST00000492844 PIP4P2Q8N4L2 257 aa8.31□□□□□ -1.08
LYST-212ENST00000492844 FXR2P51116 673 aaKnown RBP eCLIP8.28□□□□□ -1.08
LYST-212ENST00000492844 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
LYST-212ENST00000492844 SP7Q8TDD2 431 aaPredicted RBP8.28□□□□□ -1.08
LYST-212ENST00000492844 PRR29P0C7W0 189 aa8.27□□□□□ -1.09
LYST-212ENST00000492844 PRKAR2AP13861 404 aaKnown RBP8.22□□□□□ -1.09
LYST-212ENST00000492844 CREBZFQ9NS37 354 aa8.21□□□□□ -1.1
LYST-212ENST00000492844 STAG3Q9UJ98 1225 aa8.19□□□□□ -1.1
LYST-212ENST00000492844 HAX1O00165 279 aa8.15□□□□□ -1.1
LYST-212ENST00000492844 MIER1Q8N108 512 aa8.13□□□□□ -1.11
LYST-212ENST00000492844 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
LYST-212ENST00000492844 EVX2Q03828 476 aa8.12□□□□□ -1.11
LYST-212ENST00000492844 FARP1Q9Y4F1 1045 aaPredicted RBP8.1□□□□□ -1.11
LYST-212ENST00000492844 FBXO3Q9UK99 471 aa8.08□□□□□ -1.12
LYST-212ENST00000492844 VASPP50552 380 aaPredicted RBP8.07□□□□□ -1.12
LYST-212ENST00000492844 PLCD3Q8N3E9 789 aa8.07□□□□□ -1.12
LYST-212ENST00000492844 IFNLR1Q8IU57 520 aaPredicted RBP8.04□□□□□ -1.12
LYST-212ENST00000492844 C19orf67A6NJJ6 358 aa8□□□□□ -1.13
LYST-212ENST00000492844 RASEFQ8IZ41 740 aa7.97□□□□□ -1.13
LYST-212ENST00000492844 KLHL34Q8N239 644 aa7.97□□□□□ -1.13
LYST-212ENST00000492844 CD44P16070 742 aaKnown RBP7.96□□□□□ -1.14
LYST-212ENST00000492844 NUBP1P53384 320 aa7.95□□□□□ -1.14
LYST-212ENST00000492844 TSPYL2Q9H2G4 693 aaPredicted RBP7.94□□□□□ -1.14
LYST-212ENST00000492844 PLEKHG5O94827 1062 aa7.93□□□□□ -1.14
LYST-212ENST00000492844 NPM1P06748 294 aaKnown RBP eCLIP7.93□□□□□ -1.14
LYST-212ENST00000492844 ZRANB1Q9UGI0 708 aa7.92□□□□□ -1.14
LYST-212ENST00000492844 PHF12Q96QT6 1004 aa7.89□□□□□ -1.15
LYST-212ENST00000492844 GABBR2O75899 941 aa7.88□□□□□ -1.15
LYST-212ENST00000492844 SPOCK2Q92563 424 aa7.86□□□□□ -1.15
LYST-212ENST00000492844 CCDC61Q9Y6R9 512 aa7.86□□□□□ -1.15
LYST-212ENST00000492844 DCAF8Q5TAQ9 597 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms