RNA–Protein interactions for RNA: ENST00000492762.1

TMEM106B-208, Transcript of transmembrane protein 106B, humanhuman

TSL 4

Gene TMEM106B, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106B-208ENST00000492762 AEBP2Q6ZN18 517 aaPredicted RBP33.5■■■□□ 2.95
TMEM106B-208ENST00000492762 CHIC1Q5VXU3 224 aa32.77■■■□□ 2.84
TMEM106B-208ENST00000492762 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
TMEM106B-208ENST00000492762 SENP3Q9H4L4 574 aaPredicted RBP28.41■■■□□ 2.14
TMEM106B-208ENST00000492762 PLPPR3Q6T4P5 718 aa26.62■■□□□ 1.85
TMEM106B-208ENST00000492762 FOXD1Q16676 465 aa26.37■■□□□ 1.81
TMEM106B-208ENST00000492762 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
TMEM106B-208ENST00000492762 ADRA2BP18089 450 aa25.38■■□□□ 1.65
TMEM106B-208ENST00000492762 PIAS4Q8N2W9 510 aaPredicted RBP24.86■■□□□ 1.57
TMEM106B-208ENST00000492762 MSH5O43196 834 aa24.28■■□□□ 1.48
TMEM106B-208ENST00000492762 PPP4R3CPQ6ZMV5 832 aa23.47■■□□□ 1.35
TMEM106B-208ENST00000492762 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
TMEM106B-208ENST00000492762 MAPK8IP2Q13387 824 aaPredicted RBP23.01■■□□□ 1.27
TMEM106B-208ENST00000492762 KCNA4P22459 653 aa22.98■■□□□ 1.27
TMEM106B-208ENST00000492762 NCBP3Q53F19 620 aaKnown RBP22.85■■□□□ 1.25
TMEM106B-208ENST00000492762 CNKSR2Q8WXI2 1034 aa22.8■■□□□ 1.24
TMEM106B-208ENST00000492762 DMRT2Q9Y5R5 561 aa22.7■■□□□ 1.22
TMEM106B-208ENST00000492762 NPM3O75607 178 aaKnown RBP22.54■■□□□ 1.2
TMEM106B-208ENST00000492762 RNF216Q9NWF9 866 aaPredicted RBP22.35■■□□□ 1.17
TMEM106B-208ENST00000492762 HOXD11P31277 338 aaPredicted RBP22.26■■□□□ 1.15
TMEM106B-208ENST00000492762 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
TMEM106B-208ENST00000492762 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
TMEM106B-208ENST00000492762 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
TMEM106B-208ENST00000492762 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
TMEM106B-208ENST00000492762 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
TMEM106B-208ENST00000492762 SLC4A2P04920 1241 aa21.28■■□□□ 1
TMEM106B-208ENST00000492762 ZBTB22O15209 634 aa21.16■□□□□ 0.98
TMEM106B-208ENST00000492762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM106B-208ENST00000492762 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
TMEM106B-208ENST00000492762 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
TMEM106B-208ENST00000492762 U3KPZ7 1027 aaPredicted RBP20.87■□□□□ 0.93
TMEM106B-208ENST00000492762 MYCNP04198 464 aaPredicted RBP20.82■□□□□ 0.92
TMEM106B-208ENST00000492762 RNF39Q9H2S5 420 aa20.82■□□□□ 0.92
TMEM106B-208ENST00000492762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
TMEM106B-208ENST00000492762 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
TMEM106B-208ENST00000492762 C1QBPQ07021 282 aaKnown RBP20.57■□□□□ 0.88
TMEM106B-208ENST00000492762 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
TMEM106B-208ENST00000492762 ATXN8OSP0DMR3 200 aa20.4■□□□□ 0.86
TMEM106B-208ENST00000492762 APLP2Q06481 763 aa20.36■□□□□ 0.85
TMEM106B-208ENST00000492762 ATF5Q9Y2D1 282 aaPredicted RBP20.26■□□□□ 0.83
TMEM106B-208ENST00000492762 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
TMEM106B-208ENST00000492762 CACNB1Q02641 598 aaPredicted RBP20.21■□□□□ 0.83
TMEM106B-208ENST00000492762 CAPN15O75808 1086 aa20.14■□□□□ 0.81
TMEM106B-208ENST00000492762 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
TMEM106B-208ENST00000492762 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
TMEM106B-208ENST00000492762 DSG3P32926 999 aa19.83■□□□□ 0.77
TMEM106B-208ENST00000492762 ABCB7O75027 752 aa19.77■□□□□ 0.76
TMEM106B-208ENST00000492762 POLA2Q14181 598 aa19.77■□□□□ 0.76
TMEM106B-208ENST00000492762 ZBTB12Q9Y330 459 aaPredicted RBP19.44■□□□□ 0.7
TMEM106B-208ENST00000492762 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
TMEM106B-208ENST00000492762 FBLN2P98095 1184 aa19.38■□□□□ 0.69
TMEM106B-208ENST00000492762 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
TMEM106B-208ENST00000492762 FKBP8Q14318 412 aa19.02■□□□□ 0.64
TMEM106B-208ENST00000492762 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
TMEM106B-208ENST00000492762 SPDYE2BA6NHP3 402 aa18.94■□□□□ 0.62
TMEM106B-208ENST00000492762 SPDYE6P0CI01 402 aa18.94■□□□□ 0.62
TMEM106B-208ENST00000492762 SPDYE2Q495Y8 402 aa18.94■□□□□ 0.62
TMEM106B-208ENST00000492762 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
TMEM106B-208ENST00000492762 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
TMEM106B-208ENST00000492762 SSUH2Q9Y2M2 353 aa18.81■□□□□ 0.6
TMEM106B-208ENST00000492762 PROM2Q8N271 834 aa18.7■□□□□ 0.58
TMEM106B-208ENST00000492762 AKT1S1Q96B36 256 aa18.67■□□□□ 0.58
TMEM106B-208ENST00000492762 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
TMEM106B-208ENST00000492762 REM2Q8IYK8 340 aaPredicted RBP18.49■□□□□ 0.55
TMEM106B-208ENST00000492762 SPDYE1Q8NFV5 336 aaPredicted RBP18.36■□□□□ 0.53
TMEM106B-208ENST00000492762 FBXO3Q9UK99 471 aa18.34■□□□□ 0.53
TMEM106B-208ENST00000492762 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
TMEM106B-208ENST00000492762 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
TMEM106B-208ENST00000492762 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
TMEM106B-208ENST00000492762 PRR29P0C7W0 189 aa18.1■□□□□ 0.49
TMEM106B-208ENST00000492762 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
TMEM106B-208ENST00000492762 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
TMEM106B-208ENST00000492762 MIER1Q8N108 512 aa17.96■□□□□ 0.47
TMEM106B-208ENST00000492762 FXR2P51116 673 aaKnown RBP eCLIP17.94■□□□□ 0.46
TMEM106B-208ENST00000492762 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
TMEM106B-208ENST00000492762 CREBZFQ9NS37 354 aa17.91■□□□□ 0.46
TMEM106B-208ENST00000492762 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
TMEM106B-208ENST00000492762 IFNLR1Q8IU57 520 aaPredicted RBP17.86■□□□□ 0.45
TMEM106B-208ENST00000492762 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
TMEM106B-208ENST00000492762 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
TMEM106B-208ENST00000492762 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
TMEM106B-208ENST00000492762 MNX1P50219 401 aaPredicted RBP17.75■□□□□ 0.43
TMEM106B-208ENST00000492762 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
TMEM106B-208ENST00000492762 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
TMEM106B-208ENST00000492762 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
TMEM106B-208ENST00000492762 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
TMEM106B-208ENST00000492762 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
TMEM106B-208ENST00000492762 NUBP1P53384 320 aa17.53■□□□□ 0.4
TMEM106B-208ENST00000492762 POTEHQ6S545 545 aa17.44■□□□□ 0.38
TMEM106B-208ENST00000492762 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
TMEM106B-208ENST00000492762 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
TMEM106B-208ENST00000492762 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
TMEM106B-208ENST00000492762 FAM212AQ96EL1 285 aa17.36■□□□□ 0.37
TMEM106B-208ENST00000492762 GSE1Q14687 1217 aa17.33■□□□□ 0.36
TMEM106B-208ENST00000492762 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
TMEM106B-208ENST00000492762 C19orf67A6NJJ6 358 aa17.32■□□□□ 0.36
TMEM106B-208ENST00000492762 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
TMEM106B-208ENST00000492762 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
TMEM106B-208ENST00000492762 TSPYL2Q9H2G4 693 aaPredicted RBP17.3■□□□□ 0.36
TMEM106B-208ENST00000492762 PKD2Q13563 968 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms