RNA–Protein interactions for RNA: ENST00000492580.1

ABCA9-206, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 3

Gene ABCA9, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-206ENST00000492580 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
ABCA9-206ENST00000492580 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
ABCA9-206ENST00000492580 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
ABCA9-206ENST00000492580 PHF23Q9BUL5 403 aaPredicted RBP15.19■□□□□ 0.02
ABCA9-206ENST00000492580 POTEDQ86YR6 584 aa14.56□□□□□ -0.08
ABCA9-206ENST00000492580 FOXD1Q16676 465 aa14.5□□□□□ -0.09
ABCA9-206ENST00000492580 MSH5O43196 834 aa13.84□□□□□ -0.19
ABCA9-206ENST00000492580 PLPPR3Q6T4P5 718 aa13.64□□□□□ -0.23
ABCA9-206ENST00000492580 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
ABCA9-206ENST00000492580 ADRA2BP18089 450 aa13.08□□□□□ -0.32
ABCA9-206ENST00000492580 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
ABCA9-206ENST00000492580 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
ABCA9-206ENST00000492580 DMRT2Q9Y5R5 561 aa12.18□□□□□ -0.46
ABCA9-206ENST00000492580 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
ABCA9-206ENST00000492580 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
ABCA9-206ENST00000492580 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
ABCA9-206ENST00000492580 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
ABCA9-206ENST00000492580 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
ABCA9-206ENST00000492580 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
ABCA9-206ENST00000492580 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
ABCA9-206ENST00000492580 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
ABCA9-206ENST00000492580 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
ABCA9-206ENST00000492580 KCNA4P22459 653 aa11.49□□□□□ -0.57
ABCA9-206ENST00000492580 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
ABCA9-206ENST00000492580 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
ABCA9-206ENST00000492580 POTEHQ6S545 545 aa11.29□□□□□ -0.6
ABCA9-206ENST00000492580 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
ABCA9-206ENST00000492580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
ABCA9-206ENST00000492580 SLC4A1APQ9BWU0 796 aaKnown RBP10.96□□□□□ -0.65
ABCA9-206ENST00000492580 SLC4A2P04920 1241 aa10.8□□□□□ -0.68
ABCA9-206ENST00000492580 DSG3P32926 999 aa10.78□□□□□ -0.68
ABCA9-206ENST00000492580 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
ABCA9-206ENST00000492580 CAPN15O75808 1086 aa10.68□□□□□ -0.7
ABCA9-206ENST00000492580 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
ABCA9-206ENST00000492580 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
ABCA9-206ENST00000492580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
ABCA9-206ENST00000492580 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
ABCA9-206ENST00000492580 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
ABCA9-206ENST00000492580 APLP2Q06481 763 aa10.6□□□□□ -0.71
ABCA9-206ENST00000492580 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
ABCA9-206ENST00000492580 ZBTB22O15209 634 aa10.54□□□□□ -0.72
ABCA9-206ENST00000492580 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
ABCA9-206ENST00000492580 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
ABCA9-206ENST00000492580 ZNF219Q9P2Y4 722 aaPredicted RBP10.45□□□□□ -0.74
ABCA9-206ENST00000492580 ABCB7O75027 752 aa10.35□□□□□ -0.75
ABCA9-206ENST00000492580 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
ABCA9-206ENST00000492580 CHRDL2Q6WN34 429 aa10.32□□□□□ -0.76
ABCA9-206ENST00000492580 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
ABCA9-206ENST00000492580 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
ABCA9-206ENST00000492580 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
ABCA9-206ENST00000492580 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
ABCA9-206ENST00000492580 POLA2Q14181 598 aa10.19□□□□□ -0.78
ABCA9-206ENST00000492580 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
ABCA9-206ENST00000492580 FBLN2P98095 1184 aa9.97□□□□□ -0.81
ABCA9-206ENST00000492580 AKT1S1Q96B36 256 aa9.94□□□□□ -0.82
ABCA9-206ENST00000492580 HAX1O00165 279 aa9.93□□□□□ -0.82
ABCA9-206ENST00000492580 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
ABCA9-206ENST00000492580 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
ABCA9-206ENST00000492580 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
ABCA9-206ENST00000492580 MKRN4PQ13434 485 aaPredicted RBP9.81□□□□□ -0.84
ABCA9-206ENST00000492580 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
ABCA9-206ENST00000492580 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
ABCA9-206ENST00000492580 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
ABCA9-206ENST00000492580 EVX2Q03828 476 aa9.75□□□□□ -0.85
ABCA9-206ENST00000492580 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
ABCA9-206ENST00000492580 PITPNM1O00562 1244 aa9.73□□□□□ -0.85
ABCA9-206ENST00000492580 ZNF692Q9BU19 519 aaPredicted RBP9.69□□□□□ -0.86
ABCA9-206ENST00000492580 LHX8Q68G74 356 aa9.64□□□□□ -0.87
ABCA9-206ENST00000492580 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
ABCA9-206ENST00000492580 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
ABCA9-206ENST00000492580 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
ABCA9-206ENST00000492580 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
ABCA9-206ENST00000492580 SPDYE1Q8NFV5 336 aaPredicted RBP9.52□□□□□ -0.89
ABCA9-206ENST00000492580 GABBR2O75899 941 aa9.51□□□□□ -0.89
ABCA9-206ENST00000492580 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
ABCA9-206ENST00000492580 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
ABCA9-206ENST00000492580 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
ABCA9-206ENST00000492580 FKBP8Q14318 412 aa9.45□□□□□ -0.9
ABCA9-206ENST00000492580 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
ABCA9-206ENST00000492580 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
ABCA9-206ENST00000492580 PROM2Q8N271 834 aa9.31□□□□□ -0.92
ABCA9-206ENST00000492580 POTEIP0CG38 1075 aa9.29□□□□□ -0.92
ABCA9-206ENST00000492580 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
ABCA9-206ENST00000492580 CLCN6P51797 869 aa9.2□□□□□ -0.94
ABCA9-206ENST00000492580 PLEKHG5O94827 1062 aa9.17□□□□□ -0.94
ABCA9-206ENST00000492580 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
ABCA9-206ENST00000492580 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
ABCA9-206ENST00000492580 CD44P16070 742 aaKnown RBP9.14□□□□□ -0.95
ABCA9-206ENST00000492580 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
ABCA9-206ENST00000492580 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
ABCA9-206ENST00000492580 MIER1Q8N108 512 aa9.12□□□□□ -0.95
ABCA9-206ENST00000492580 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
ABCA9-206ENST00000492580 POTEMA6NI47 508 aa9.11□□□□□ -0.95
ABCA9-206ENST00000492580 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
ABCA9-206ENST00000492580 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
ABCA9-206ENST00000492580 POTEGQ6S5H5 508 aa9.05□□□□□ -0.96
ABCA9-206ENST00000492580 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
ABCA9-206ENST00000492580 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
ABCA9-206ENST00000492580 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
ABCA9-206ENST00000492580 PAK3O75914 559 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms