RNA–Protein interactions for RNA: ENST00000492501.1

APPL1-207, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

TSL 4

Gene APPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-207ENST00000492501 AEBP2Q6ZN18 517 aaPredicted RBP35.95■■■■□ 3.35
APPL1-207ENST00000492501 CHIC1Q5VXU3 224 aa34.22■■■■□ 3.07
APPL1-207ENST00000492501 SENP3Q9H4L4 574 aaPredicted RBP30.79■■■□□ 2.52
APPL1-207ENST00000492501 PHF23Q9BUL5 403 aaPredicted RBP30.37■■■□□ 2.45
APPL1-207ENST00000492501 FOXD1Q16676 465 aa28.63■■■□□ 2.17
APPL1-207ENST00000492501 PLPPR3Q6T4P5 718 aa27.42■■□□□ 1.98
APPL1-207ENST00000492501 MSH5O43196 834 aa26.86■■□□□ 1.89
APPL1-207ENST00000492501 PIAS4Q8N2W9 510 aaPredicted RBP26.82■■□□□ 1.88
APPL1-207ENST00000492501 PPP6R1Q9UPN7 881 aa26.75■■□□□ 1.87
APPL1-207ENST00000492501 ADRA2BP18089 450 aa26.72■■□□□ 1.87
APPL1-207ENST00000492501 POTEDQ86YR6 584 aa26.11■■□□□ 1.77
APPL1-207ENST00000492501 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
APPL1-207ENST00000492501 MAPK8IP2Q13387 824 aaPredicted RBP24.51■■□□□ 1.51
APPL1-207ENST00000492501 DMRT2Q9Y5R5 561 aa24.37■■□□□ 1.49
APPL1-207ENST00000492501 PPP4R3CPQ6ZMV5 832 aa24.01■■□□□ 1.43
APPL1-207ENST00000492501 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
APPL1-207ENST00000492501 DCAF8L1A6NGE4 600 aa23.49■■□□□ 1.35
APPL1-207ENST00000492501 HOXD11P31277 338 aaPredicted RBP23.47■■□□□ 1.35
APPL1-207ENST00000492501 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
APPL1-207ENST00000492501 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
APPL1-207ENST00000492501 CACNB1Q02641 598 aaPredicted RBP23.07■■□□□ 1.28
APPL1-207ENST00000492501 RNF39Q9H2S5 420 aa22.86■■□□□ 1.25
APPL1-207ENST00000492501 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
APPL1-207ENST00000492501 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
APPL1-207ENST00000492501 C1QBPQ07021 282 aaKnown RBP22.58■■□□□ 1.21
APPL1-207ENST00000492501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.19
APPL1-207ENST00000492501 KCNA4P22459 653 aa22.31■■□□□ 1.16
APPL1-207ENST00000492501 U3KPZ7 1027 aaPredicted RBP21.9■■□□□ 1.1
APPL1-207ENST00000492501 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
APPL1-207ENST00000492501 CAPN15O75808 1086 aa21.64■■□□□ 1.05
APPL1-207ENST00000492501 SPINK5Q9NQ38 1064 aaPredicted RBP21.58■■□□□ 1.05
APPL1-207ENST00000492501 APLP2Q06481 763 aa21.45■■□□□ 1.02
APPL1-207ENST00000492501 DSG3P32926 999 aa21.42■■□□□ 1.02
APPL1-207ENST00000492501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
APPL1-207ENST00000492501 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
APPL1-207ENST00000492501 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
APPL1-207ENST00000492501 SAMD1Q6SPF0 538 aaPredicted RBP21.26■□□□□ 0.99
APPL1-207ENST00000492501 ZNF219Q9P2Y4 722 aaPredicted RBP21.24■□□□□ 0.99
APPL1-207ENST00000492501 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
APPL1-207ENST00000492501 ABCB7O75027 752 aa21.09■□□□□ 0.97
APPL1-207ENST00000492501 MYCNP04198 464 aaPredicted RBP21.08■□□□□ 0.97
APPL1-207ENST00000492501 FOXD4L1Q9NU39 408 aa20.85■□□□□ 0.93
APPL1-207ENST00000492501 POLA2Q14181 598 aa20.7■□□□□ 0.9
APPL1-207ENST00000492501 RBM42Q9BTD8 480 aaKnown RBP20.53■□□□□ 0.88
APPL1-207ENST00000492501 POTEHQ6S545 545 aa20.5■□□□□ 0.87
APPL1-207ENST00000492501 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
APPL1-207ENST00000492501 ZBTB22O15209 634 aa20.45■□□□□ 0.86
APPL1-207ENST00000492501 ZBTB12Q9Y330 459 aaPredicted RBP20.33■□□□□ 0.85
APPL1-207ENST00000492501 ATXN8OSP0DMR3 200 aa20.23■□□□□ 0.83
APPL1-207ENST00000492501 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
APPL1-207ENST00000492501 CHRDL2Q6WN34 429 aa20.02■□□□□ 0.8
APPL1-207ENST00000492501 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
APPL1-207ENST00000492501 FBLN2P98095 1184 aa19.86■□□□□ 0.77
APPL1-207ENST00000492501 REM2Q8IYK8 340 aaPredicted RBP19.82■□□□□ 0.76
APPL1-207ENST00000492501 SPDYE2BA6NHP3 402 aa19.66■□□□□ 0.74
APPL1-207ENST00000492501 SPDYE6P0CI01 402 aa19.66■□□□□ 0.74
APPL1-207ENST00000492501 SPDYE2Q495Y8 402 aa19.66■□□□□ 0.74
APPL1-207ENST00000492501 PITPNM1O00562 1244 aa19.58■□□□□ 0.72
APPL1-207ENST00000492501 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
APPL1-207ENST00000492501 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
APPL1-207ENST00000492501 PIP4P2Q8N4L2 257 aa19.52■□□□□ 0.72
APPL1-207ENST00000492501 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
APPL1-207ENST00000492501 FXR2P51116 673 aaKnown RBP eCLIP19.4■□□□□ 0.7
APPL1-207ENST00000492501 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
APPL1-207ENST00000492501 SPDYE1Q8NFV5 336 aaPredicted RBP19.34■□□□□ 0.69
APPL1-207ENST00000492501 CLEC11AQ9Y240 323 aa19.33■□□□□ 0.68
APPL1-207ENST00000492501 SSUH2Q9Y2M2 353 aa19.33■□□□□ 0.68
APPL1-207ENST00000492501 HAX1O00165 279 aa19.25■□□□□ 0.67
APPL1-207ENST00000492501 SP7Q8TDD2 431 aaPredicted RBP19.23■□□□□ 0.67
APPL1-207ENST00000492501 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
APPL1-207ENST00000492501 PRKAR2AP13861 404 aaKnown RBP19.12■□□□□ 0.65
APPL1-207ENST00000492501 PRR29P0C7W0 189 aa19.01■□□□□ 0.63
APPL1-207ENST00000492501 CHADLQ6NUI6 762 aa18.89■□□□□ 0.61
APPL1-207ENST00000492501 EVX2Q03828 476 aa18.88■□□□□ 0.61
APPL1-207ENST00000492501 C19orf67A6NJJ6 358 aa18.78■□□□□ 0.6
APPL1-207ENST00000492501 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
APPL1-207ENST00000492501 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
APPL1-207ENST00000492501 FARP1Q9Y4F1 1045 aaPredicted RBP18.62■□□□□ 0.57
APPL1-207ENST00000492501 GABBR2O75899 941 aa18.52■□□□□ 0.56
APPL1-207ENST00000492501 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
APPL1-207ENST00000492501 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
APPL1-207ENST00000492501 CLCN6P51797 869 aa18.32■□□□□ 0.52
APPL1-207ENST00000492501 ZRANB1Q9UGI0 708 aa18.28■□□□□ 0.52
APPL1-207ENST00000492501 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
APPL1-207ENST00000492501 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
APPL1-207ENST00000492501 ZNF579Q8NAF0 562 aaKnown RBP18.2■□□□□ 0.5
APPL1-207ENST00000492501 PROM2Q8N271 834 aa18.18■□□□□ 0.5
APPL1-207ENST00000492501 DCBLD2Q96PD2 775 aa18.12■□□□□ 0.49
APPL1-207ENST00000492501 MNX1P50219 401 aaPredicted RBP18.09■□□□□ 0.49
APPL1-207ENST00000492501 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
APPL1-207ENST00000492501 LHX8Q68G74 356 aa18.06■□□□□ 0.48
APPL1-207ENST00000492501 PLEKHG5O94827 1062 aa17.99■□□□□ 0.47
APPL1-207ENST00000492501 GALR2O43603 387 aaPredicted RBP17.97■□□□□ 0.47
APPL1-207ENST00000492501 PHF12Q96QT6 1004 aa17.97■□□□□ 0.47
APPL1-207ENST00000492501 MIER1Q8N108 512 aa17.94■□□□□ 0.46
APPL1-207ENST00000492501 TSPYL2Q9H2G4 693 aaPredicted RBP17.87■□□□□ 0.45
APPL1-207ENST00000492501 FKBP8Q14318 412 aa17.83■□□□□ 0.44
APPL1-207ENST00000492501 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
APPL1-207ENST00000492501 MS4A3Q96HJ5 214 aa17.73■□□□□ 0.43
APPL1-207ENST00000492501 CCDC61Q9Y6R9 512 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms