RNA–Protein interactions for RNA: ENST00000492154.1

SLC9A4-202, Transcript of solute carrier family 9 member A4, humanhuman

TSL 3

Gene SLC9A4, Length 818 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A4-202ENST00000492154 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
SLC9A4-202ENST00000492154 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
SLC9A4-202ENST00000492154 SENP3Q9H4L4 574 aaPredicted RBP25.25■■□□□ 1.63
SLC9A4-202ENST00000492154 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
SLC9A4-202ENST00000492154 FOXD1Q16676 465 aa23.61■■□□□ 1.37
SLC9A4-202ENST00000492154 POTEDQ86YR6 584 aa23.39■■□□□ 1.33
SLC9A4-202ENST00000492154 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
SLC9A4-202ENST00000492154 MSH5O43196 834 aa22.2■■□□□ 1.14
SLC9A4-202ENST00000492154 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
SLC9A4-202ENST00000492154 ADRA2BP18089 450 aa22.09■■□□□ 1.13
SLC9A4-202ENST00000492154 PIAS4Q8N2W9 510 aaPredicted RBP22.04■■□□□ 1.12
SLC9A4-202ENST00000492154 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
SLC9A4-202ENST00000492154 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
SLC9A4-202ENST00000492154 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
SLC9A4-202ENST00000492154 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
SLC9A4-202ENST00000492154 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
SLC9A4-202ENST00000492154 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
SLC9A4-202ENST00000492154 HOXD11P31277 338 aaPredicted RBP19.35■□□□□ 0.69
SLC9A4-202ENST00000492154 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
SLC9A4-202ENST00000492154 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
SLC9A4-202ENST00000492154 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
SLC9A4-202ENST00000492154 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
SLC9A4-202ENST00000492154 RNF39Q9H2S5 420 aa18.83■□□□□ 0.6
SLC9A4-202ENST00000492154 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
SLC9A4-202ENST00000492154 KCNA4P22459 653 aa18.56■□□□□ 0.56
SLC9A4-202ENST00000492154 C1QBPQ07021 282 aaKnown RBP18.51■□□□□ 0.55
SLC9A4-202ENST00000492154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
SLC9A4-202ENST00000492154 POTEHQ6S545 545 aa18.13■□□□□ 0.49
SLC9A4-202ENST00000492154 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
SLC9A4-202ENST00000492154 SLC4A2P04920 1241 aa18■□□□□ 0.47
SLC9A4-202ENST00000492154 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
SLC9A4-202ENST00000492154 CAPN15O75808 1086 aa17.74■□□□□ 0.43
SLC9A4-202ENST00000492154 DSG3P32926 999 aa17.65■□□□□ 0.42
SLC9A4-202ENST00000492154 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
SLC9A4-202ENST00000492154 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
SLC9A4-202ENST00000492154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
SLC9A4-202ENST00000492154 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
SLC9A4-202ENST00000492154 APLP2Q06481 763 aa17.43■□□□□ 0.38
SLC9A4-202ENST00000492154 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
SLC9A4-202ENST00000492154 ABCB7O75027 752 aa17.39■□□□□ 0.37
SLC9A4-202ENST00000492154 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
SLC9A4-202ENST00000492154 MYCNP04198 464 aaPredicted RBP17.36■□□□□ 0.37
SLC9A4-202ENST00000492154 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
SLC9A4-202ENST00000492154 ZBTB22O15209 634 aa17.12■□□□□ 0.33
SLC9A4-202ENST00000492154 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
SLC9A4-202ENST00000492154 POLA2Q14181 598 aa17.03■□□□□ 0.32
SLC9A4-202ENST00000492154 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
SLC9A4-202ENST00000492154 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
SLC9A4-202ENST00000492154 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
SLC9A4-202ENST00000492154 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
SLC9A4-202ENST00000492154 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
SLC9A4-202ENST00000492154 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
SLC9A4-202ENST00000492154 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
SLC9A4-202ENST00000492154 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
SLC9A4-202ENST00000492154 REM2Q8IYK8 340 aaPredicted RBP16.3■□□□□ 0.2
SLC9A4-202ENST00000492154 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
SLC9A4-202ENST00000492154 FBLN2P98095 1184 aa16.25■□□□□ 0.19
SLC9A4-202ENST00000492154 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
SLC9A4-202ENST00000492154 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
SLC9A4-202ENST00000492154 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
SLC9A4-202ENST00000492154 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
SLC9A4-202ENST00000492154 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
SLC9A4-202ENST00000492154 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
SLC9A4-202ENST00000492154 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
SLC9A4-202ENST00000492154 SSUH2Q9Y2M2 353 aa15.98■□□□□ 0.15
SLC9A4-202ENST00000492154 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
SLC9A4-202ENST00000492154 HAX1O00165 279 aa15.9■□□□□ 0.14
SLC9A4-202ENST00000492154 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
SLC9A4-202ENST00000492154 SPDYE1Q8NFV5 336 aaPredicted RBP15.83■□□□□ 0.12
SLC9A4-202ENST00000492154 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
SLC9A4-202ENST00000492154 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
SLC9A4-202ENST00000492154 EVX2Q03828 476 aa15.64■□□□□ 0.09
SLC9A4-202ENST00000492154 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
SLC9A4-202ENST00000492154 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
SLC9A4-202ENST00000492154 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
SLC9A4-202ENST00000492154 LHX8Q68G74 356 aa15.46■□□□□ 0.07
SLC9A4-202ENST00000492154 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
SLC9A4-202ENST00000492154 PLSCR2Q9NRY7 297 aa15.31■□□□□ 0.04
SLC9A4-202ENST00000492154 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
SLC9A4-202ENST00000492154 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
SLC9A4-202ENST00000492154 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
SLC9A4-202ENST00000492154 GABBR2O75899 941 aa15.23■□□□□ 0.03
SLC9A4-202ENST00000492154 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
SLC9A4-202ENST00000492154 PROM2Q8N271 834 aa15.13■□□□□ 0.01
SLC9A4-202ENST00000492154 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
SLC9A4-202ENST00000492154 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
SLC9A4-202ENST00000492154 ZNF579Q8NAF0 562 aaKnown RBP14.97□□□□□ -0.01
SLC9A4-202ENST00000492154 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
SLC9A4-202ENST00000492154 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
SLC9A4-202ENST00000492154 CLCN6P51797 869 aa14.85□□□□□ -0.03
SLC9A4-202ENST00000492154 PHF12Q96QT6 1004 aa14.85□□□□□ -0.03
SLC9A4-202ENST00000492154 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
SLC9A4-202ENST00000492154 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
SLC9A4-202ENST00000492154 FKBP8Q14318 412 aa14.79□□□□□ -0.04
SLC9A4-202ENST00000492154 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
SLC9A4-202ENST00000492154 MIER1Q8N108 512 aa14.72□□□□□ -0.05
SLC9A4-202ENST00000492154 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
SLC9A4-202ENST00000492154 MS4A3Q96HJ5 214 aa14.64□□□□□ -0.07
SLC9A4-202ENST00000492154 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
SLC9A4-202ENST00000492154 POTEMA6NI47 508 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms