RNA–Protein interactions for RNA: ENST00000491510.1

TOP2B-207, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 584 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-207ENST00000491510 AEBP2Q6ZN18 517 aaPredicted RBP29.16■■■□□ 2.26
TOP2B-207ENST00000491510 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
TOP2B-207ENST00000491510 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
TOP2B-207ENST00000491510 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
TOP2B-207ENST00000491510 FOXD1Q16676 465 aa23.22■■□□□ 1.31
TOP2B-207ENST00000491510 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
TOP2B-207ENST00000491510 MSH5O43196 834 aa21.82■■□□□ 1.08
TOP2B-207ENST00000491510 PIAS4Q8N2W9 510 aaPredicted RBP21.77■■□□□ 1.08
TOP2B-207ENST00000491510 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
TOP2B-207ENST00000491510 ADRA2BP18089 450 aa21.66■■□□□ 1.06
TOP2B-207ENST00000491510 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
TOP2B-207ENST00000491510 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
TOP2B-207ENST00000491510 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
TOP2B-207ENST00000491510 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
TOP2B-207ENST00000491510 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
TOP2B-207ENST00000491510 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
TOP2B-207ENST00000491510 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
TOP2B-207ENST00000491510 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
TOP2B-207ENST00000491510 RNF216Q9NWF9 866 aaPredicted RBP18.97■□□□□ 0.63
TOP2B-207ENST00000491510 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
TOP2B-207ENST00000491510 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
TOP2B-207ENST00000491510 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
TOP2B-207ENST00000491510 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
TOP2B-207ENST00000491510 DNAJC5BQ9UF47 199 aa18.45■□□□□ 0.54
TOP2B-207ENST00000491510 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
TOP2B-207ENST00000491510 KCNA4P22459 653 aa18.25■□□□□ 0.51
TOP2B-207ENST00000491510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
TOP2B-207ENST00000491510 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
TOP2B-207ENST00000491510 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
TOP2B-207ENST00000491510 CAPN15O75808 1086 aa17.56■□□□□ 0.4
TOP2B-207ENST00000491510 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
TOP2B-207ENST00000491510 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
TOP2B-207ENST00000491510 APLP2Q06481 763 aa17.46■□□□□ 0.39
TOP2B-207ENST00000491510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
TOP2B-207ENST00000491510 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
TOP2B-207ENST00000491510 DSG3P32926 999 aa17.38■□□□□ 0.37
TOP2B-207ENST00000491510 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
TOP2B-207ENST00000491510 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
TOP2B-207ENST00000491510 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
TOP2B-207ENST00000491510 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
TOP2B-207ENST00000491510 ABCB7O75027 752 aa17.11■□□□□ 0.33
TOP2B-207ENST00000491510 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
TOP2B-207ENST00000491510 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
TOP2B-207ENST00000491510 POLA2Q14181 598 aa16.8■□□□□ 0.28
TOP2B-207ENST00000491510 ZBTB22O15209 634 aa16.72■□□□□ 0.27
TOP2B-207ENST00000491510 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
TOP2B-207ENST00000491510 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
TOP2B-207ENST00000491510 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
TOP2B-207ENST00000491510 POTEHQ6S545 545 aa16.6■□□□□ 0.25
TOP2B-207ENST00000491510 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
TOP2B-207ENST00000491510 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
TOP2B-207ENST00000491510 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
TOP2B-207ENST00000491510 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
TOP2B-207ENST00000491510 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
TOP2B-207ENST00000491510 FBLN2P98095 1184 aa16.15■□□□□ 0.18
TOP2B-207ENST00000491510 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
TOP2B-207ENST00000491510 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
TOP2B-207ENST00000491510 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
TOP2B-207ENST00000491510 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
TOP2B-207ENST00000491510 PITPNM1O00562 1244 aa15.9■□□□□ 0.14
TOP2B-207ENST00000491510 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
TOP2B-207ENST00000491510 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
TOP2B-207ENST00000491510 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
TOP2B-207ENST00000491510 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
TOP2B-207ENST00000491510 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
TOP2B-207ENST00000491510 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
TOP2B-207ENST00000491510 CLEC11AQ9Y240 323 aa15.68■□□□□ 0.1
TOP2B-207ENST00000491510 HAX1O00165 279 aa15.6■□□□□ 0.09
TOP2B-207ENST00000491510 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
TOP2B-207ENST00000491510 PABPN1Q86U42 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
TOP2B-207ENST00000491510 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
TOP2B-207ENST00000491510 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
TOP2B-207ENST00000491510 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
TOP2B-207ENST00000491510 EVX2Q03828 476 aa15.28■□□□□ 0.04
TOP2B-207ENST00000491510 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
TOP2B-207ENST00000491510 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
TOP2B-207ENST00000491510 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
TOP2B-207ENST00000491510 FKBP8Q14318 412 aa15.16■□□□□ 0.02
TOP2B-207ENST00000491510 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
TOP2B-207ENST00000491510 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
TOP2B-207ENST00000491510 GABBR2O75899 941 aa15.01□□□□□ -0.01
TOP2B-207ENST00000491510 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
TOP2B-207ENST00000491510 CLCN6P51797 869 aa14.9□□□□□ -0.02
TOP2B-207ENST00000491510 PROM2Q8N271 834 aa14.85□□□□□ -0.03
TOP2B-207ENST00000491510 ZRANB1Q9UGI0 708 aa14.84□□□□□ -0.03
TOP2B-207ENST00000491510 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
TOP2B-207ENST00000491510 PAK3O75914 559 aaPredicted RBP14.81□□□□□ -0.04
TOP2B-207ENST00000491510 ZNF579Q8NAF0 562 aaKnown RBP14.8□□□□□ -0.04
TOP2B-207ENST00000491510 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
TOP2B-207ENST00000491510 MNX1P50219 401 aaPredicted RBP14.7□□□□□ -0.06
TOP2B-207ENST00000491510 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
TOP2B-207ENST00000491510 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
TOP2B-207ENST00000491510 LHX8Q68G74 356 aa14.64□□□□□ -0.07
TOP2B-207ENST00000491510 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
TOP2B-207ENST00000491510 PHF12Q96QT6 1004 aa14.59□□□□□ -0.07
TOP2B-207ENST00000491510 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
TOP2B-207ENST00000491510 MIER1Q8N108 512 aa14.57□□□□□ -0.08
TOP2B-207ENST00000491510 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
TOP2B-207ENST00000491510 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
TOP2B-207ENST00000491510 VASPP50552 380 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms