RNA–Protein interactions for RNA: ENST00000491448.5

GTDC1-218, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-218ENST00000491448 AEBP2Q6ZN18 517 aaPredicted RBP9.03□□□□□ -0.96
GTDC1-218ENST00000491448 CHIC1Q5VXU3 224 aa8.78□□□□□ -1
GTDC1-218ENST00000491448 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
GTDC1-218ENST00000491448 NISCHQ9Y2I1 1504 aa8.09□□□□□ -1.11
GTDC1-218ENST00000491448 PHF23Q9BUL5 403 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-218ENST00000491448 POTEDQ86YR6 584 aa7.81□□□□□ -1.16
GTDC1-218ENST00000491448 DAXXQ9UER7 740 aaPredicted RBP7.47□□□□□ -1.21
GTDC1-218ENST00000491448 SENP3Q9H4L4 574 aaPredicted RBP7.42□□□□□ -1.22
GTDC1-218ENST00000491448 PLPPR3Q6T4P5 718 aa7.41□□□□□ -1.22
GTDC1-218ENST00000491448 EHMT2Q96KQ7 1210 aa7.41□□□□□ -1.22
GTDC1-218ENST00000491448 PRKCSHP14314 528 aaPredicted RBP7.38□□□□□ -1.23
GTDC1-218ENST00000491448 APLP2Q06481 763 aa7.32□□□□□ -1.24
GTDC1-218ENST00000491448 RTN4Q9NQC3 1192 aaKnown RBP7.32□□□□□ -1.24
GTDC1-218ENST00000491448 NCBP3Q53F19 620 aaKnown RBP7.27□□□□□ -1.25
GTDC1-218ENST00000491448 TTBK1Q5TCY1 1321 aaPredicted RBP7.25□□□□□ -1.25
GTDC1-218ENST00000491448 MYT1Q01538 1121 aa7.24□□□□□ -1.25
GTDC1-218ENST00000491448 PELP1Q8IZL8 1130 aaKnown RBP7.15□□□□□ -1.26
GTDC1-218ENST00000491448 ERICH6Q7L0X2 663 aa7.1□□□□□ -1.27
GTDC1-218ENST00000491448 FOXD1Q16676 465 aa7.02□□□□□ -1.29
GTDC1-218ENST00000491448 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
GTDC1-218ENST00000491448 TIMELESSQ9UNS1 1208 aa7.01□□□□□ -1.29
GTDC1-218ENST00000491448 KCNA4P22459 653 aa6.99□□□□□ -1.29
GTDC1-218ENST00000491448 AMER1Q5JTC6 1135 aaPredicted RBP6.99□□□□□ -1.29
GTDC1-218ENST00000491448 ARXQ96QS3 562 aa6.98□□□□□ -1.29
GTDC1-218ENST00000491448 PPP6R1Q9UPN7 881 aa6.95□□□□□ -1.3
GTDC1-218ENST00000491448 ADRA2BP18089 450 aa6.92□□□□□ -1.3
GTDC1-218ENST00000491448 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
GTDC1-218ENST00000491448 CSRNP3Q8WYN3 585 aa6.9□□□□□ -1.3
GTDC1-218ENST00000491448 KLHL34Q8N239 644 aa6.86□□□□□ -1.31
GTDC1-218ENST00000491448 TULP1O00294 542 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-218ENST00000491448 EIF5BO60841 1220 aaKnown RBP6.82□□□□□ -1.32
GTDC1-218ENST00000491448 DCAF1Q9Y4B6 1507 aa6.81□□□□□ -1.32
GTDC1-218ENST00000491448 TAOK2Q9UL54 1235 aa6.78□□□□□ -1.32
GTDC1-218ENST00000491448 PLEKHG5O94827 1062 aa6.73□□□□□ -1.33
GTDC1-218ENST00000491448 RANGAP1P46060 587 aaPredicted RBP6.72□□□□□ -1.33
GTDC1-218ENST00000491448 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
GTDC1-218ENST00000491448 PODXL2Q9NZ53 605 aa6.68□□□□□ -1.34
GTDC1-218ENST00000491448 TPRNQ4KMQ1 711 aa6.66□□□□□ -1.34
GTDC1-218ENST00000491448 SHROOM4Q9ULL8 1493 aa6.62□□□□□ -1.35
GTDC1-218ENST00000491448 PIAS4Q8N2W9 510 aaPredicted RBP6.62□□□□□ -1.35
GTDC1-218ENST00000491448 MYO15BQ96JP2 1530 aa6.61□□□□□ -1.35
GTDC1-218ENST00000491448 HRCP23327 699 aa6.6□□□□□ -1.35
GTDC1-218ENST00000491448 BCANQ96GW7 911 aa6.59□□□□□ -1.35
GTDC1-218ENST00000491448 MSH5O43196 834 aa6.58□□□□□ -1.36
GTDC1-218ENST00000491448 ABCC9O60706 1549 aa6.58□□□□□ -1.36
GTDC1-218ENST00000491448 BCL11AQ9H165 835 aa6.57□□□□□ -1.36
GTDC1-218ENST00000491448 GTF3C3Q9Y5Q9 886 aa6.57□□□□□ -1.36
GTDC1-218ENST00000491448 SUPT5HO00267 1087 aaKnown RBP6.54□□□□□ -1.36
GTDC1-218ENST00000491448 NPM2Q86SE8 214 aaKnown RBP6.52□□□□□ -1.37
GTDC1-218ENST00000491448 PLCB2Q00722 1185 aa6.49□□□□□ -1.37
GTDC1-218ENST00000491448 LOC105371045A0A1W2PR82 267 aa6.48□□□□□ -1.37
GTDC1-218ENST00000491448 FAM9AQ8IZU1 332 aaPredicted RBP6.46□□□□□ -1.38
GTDC1-218ENST00000491448 C14orf37Q86TY3 774 aa6.44□□□□□ -1.38
GTDC1-218ENST00000491448 RB1CC1Q8TDY2 1594 aa6.43□□□□□ -1.38
GTDC1-218ENST00000491448 TRIM26Q12899 539 aaPredicted RBP6.43□□□□□ -1.38
GTDC1-218ENST00000491448 TMEM132AQ24JP5 1023 aa6.42□□□□□ -1.38
GTDC1-218ENST00000491448 HAP1P54257 671 aaPredicted RBP6.4□□□□□ -1.38
GTDC1-218ENST00000491448 RSF1Q96T23 1441 aaPredicted RBP6.38□□□□□ -1.39
GTDC1-218ENST00000491448 PPP4R3CPQ6ZMV5 832 aa6.37□□□□□ -1.39
GTDC1-218ENST00000491448 SLC4A1APQ9BWU0 796 aaKnown RBP6.37□□□□□ -1.39
GTDC1-218ENST00000491448 ZEB1P37275 1124 aaPredicted RBP6.37□□□□□ -1.39
GTDC1-218ENST00000491448 NACADO15069 1562 aa6.36□□□□□ -1.39
GTDC1-218ENST00000491448 PCGF6Q9BYE7 350 aa6.36□□□□□ -1.39
GTDC1-218ENST00000491448 EIF4G1Q04637 1599 aaKnown RBP6.35□□□□□ -1.39
GTDC1-218ENST00000491448 PDIA4P13667 645 aaKnown RBP6.35□□□□□ -1.39
GTDC1-218ENST00000491448 FBXO3Q9UK99 471 aa6.35□□□□□ -1.39
GTDC1-218ENST00000491448 UBTFP17480 764 aaKnown RBP6.33□□□□□ -1.4
GTDC1-218ENST00000491448 SCRIBQ14160 1630 aa6.32□□□□□ -1.4
GTDC1-218ENST00000491448 BAZ1AQ9NRL2 1556 aaPredicted RBP6.31□□□□□ -1.4
GTDC1-218ENST00000491448 KDM2AQ9Y2K7 1162 aa6.3□□□□□ -1.4
GTDC1-218ENST00000491448 CHMP4AQ9BY43 222 aa6.29□□□□□ -1.4
GTDC1-218ENST00000491448 ZBTB22O15209 634 aa6.28□□□□□ -1.4
GTDC1-218ENST00000491448 MAPK8IP2Q13387 824 aaPredicted RBP6.28□□□□□ -1.4
GTDC1-218ENST00000491448 UBE2Q2Q8WVN8 375 aa6.28□□□□□ -1.4
GTDC1-218ENST00000491448 SAMD1Q6SPF0 538 aaPredicted RBP6.26□□□□□ -1.41
GTDC1-218ENST00000491448 PPARGC1BQ86YN6 1023 aaKnown RBP6.24□□□□□ -1.41
GTDC1-218ENST00000491448 FBLN2P98095 1184 aa6.23□□□□□ -1.41
GTDC1-218ENST00000491448 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
GTDC1-218ENST00000491448 WRNQ14191 1432 aaPredicted RBP eCLIP6.23□□□□□ -1.41
GTDC1-218ENST00000491448 MROH2BQ7Z745 1585 aa6.23□□□□□ -1.41
GTDC1-218ENST00000491448 VSIG10Q8N0Z9 540 aa6.22□□□□□ -1.41
GTDC1-218ENST00000491448 TOP2AP11388 1531 aaKnown RBP6.22□□□□□ -1.41
GTDC1-218ENST00000491448 DCAF8L2P0C7V8 631 aa6.21□□□□□ -1.41
GTDC1-218ENST00000491448 WIZO95785 1651 aa6.21□□□□□ -1.42
GTDC1-218ENST00000491448 PDE4CQ08493 712 aa6.2□□□□□ -1.42
GTDC1-218ENST00000491448 NPM3O75607 178 aaKnown RBP6.2□□□□□ -1.42
GTDC1-218ENST00000491448 IGSF3O75054 1194 aa6.19□□□□□ -1.42
GTDC1-218ENST00000491448 TRIM41Q8WV44 630 aa6.19□□□□□ -1.42
GTDC1-218ENST00000491448 CNKSR2Q8WXI2 1034 aa6.18□□□□□ -1.42
GTDC1-218ENST00000491448 EEA1Q15075 1411 aa6.18□□□□□ -1.42
GTDC1-218ENST00000491448 CECR2Q9BXF3 1484 aa6.18□□□□□ -1.42
GTDC1-218ENST00000491448 SMARCA4P51532 1647 aa6.17□□□□□ -1.42
GTDC1-218ENST00000491448 SMARCA2P51531 1590 aa6.15□□□□□ -1.42
GTDC1-218ENST00000491448 PEG3Q9GZU2 1588 aa6.15□□□□□ -1.43
GTDC1-218ENST00000491448 UNC13AQ9UPW8 1703 aa6.13□□□□□ -1.43
GTDC1-218ENST00000491448 BRD2P25440 801 aaKnown RBP6.13□□□□□ -1.43
GTDC1-218ENST00000491448 PKNOX2Q96KN3 472 aa6.12□□□□□ -1.43
GTDC1-218ENST00000491448 KIF21BO75037 1637 aa6.11□□□□□ -1.43
GTDC1-218ENST00000491448 CACNB1Q02641 598 aaPredicted RBP6.11□□□□□ -1.43
GTDC1-218ENST00000491448 TNIKQ9UKE5 1360 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms