RNA–Protein interactions for RNA: ENST00000491428.1

RRP15-202, Transcript of ribosomal RNA processing 15 homolog, humanhuman

TSL 1 (best)

Gene RRP15, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP15-202ENST00000491428 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
RRP15-202ENST00000491428 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
RRP15-202ENST00000491428 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
RRP15-202ENST00000491428 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
RRP15-202ENST00000491428 FOXD1Q16676 465 aa21.3■■□□□ 1
RRP15-202ENST00000491428 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
RRP15-202ENST00000491428 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
RRP15-202ENST00000491428 ADRA2BP18089 450 aa19.9■□□□□ 0.78
RRP15-202ENST00000491428 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
RRP15-202ENST00000491428 MSH5O43196 834 aa19.76■□□□□ 0.75
RRP15-202ENST00000491428 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
RRP15-202ENST00000491428 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
RRP15-202ENST00000491428 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
RRP15-202ENST00000491428 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
RRP15-202ENST00000491428 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
RRP15-202ENST00000491428 HOXD11P31277 338 aaPredicted RBP17.45■□□□□ 0.38
RRP15-202ENST00000491428 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
RRP15-202ENST00000491428 KCNA4P22459 653 aa17.31■□□□□ 0.36
RRP15-202ENST00000491428 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
RRP15-202ENST00000491428 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
RRP15-202ENST00000491428 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
RRP15-202ENST00000491428 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
RRP15-202ENST00000491428 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
RRP15-202ENST00000491428 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
RRP15-202ENST00000491428 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
RRP15-202ENST00000491428 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
RRP15-202ENST00000491428 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
RRP15-202ENST00000491428 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
RRP15-202ENST00000491428 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
RRP15-202ENST00000491428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.242e-6■■■■■ 30
RRP15-202ENST00000491428 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
RRP15-202ENST00000491428 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
RRP15-202ENST00000491428 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
RRP15-202ENST00000491428 ZBTB22O15209 634 aa15.97■□□□□ 0.15
RRP15-202ENST00000491428 DSG3P32926 999 aa15.92■□□□□ 0.14
RRP15-202ENST00000491428 CAPN15O75808 1086 aa15.91■□□□□ 0.14
RRP15-202ENST00000491428 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
RRP15-202ENST00000491428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
RRP15-202ENST00000491428 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
RRP15-202ENST00000491428 ABCB7O75027 752 aa15.63■□□□□ 0.09
RRP15-202ENST00000491428 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
RRP15-202ENST00000491428 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
RRP15-202ENST00000491428 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
RRP15-202ENST00000491428 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
RRP15-202ENST00000491428 APLP2Q06481 763 aa15.59■□□□□ 0.09
RRP15-202ENST00000491428 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
RRP15-202ENST00000491428 POLA2Q14181 598 aa15.31■□□□□ 0.04
RRP15-202ENST00000491428 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
RRP15-202ENST00000491428 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
RRP15-202ENST00000491428 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
RRP15-202ENST00000491428 POTEHQ6S545 545 aa15.12■□□□□ 0.01
RRP15-202ENST00000491428 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
RRP15-202ENST00000491428 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
RRP15-202ENST00000491428 FKBP8Q14318 412 aa14.94□□□□□ -0.02
RRP15-202ENST00000491428 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
RRP15-202ENST00000491428 ZBTB12Q9Y330 459 aaPredicted RBP14.87□□□□□ -0.03
RRP15-202ENST00000491428 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
RRP15-202ENST00000491428 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
RRP15-202ENST00000491428 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
RRP15-202ENST00000491428 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
RRP15-202ENST00000491428 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
RRP15-202ENST00000491428 FBLN2P98095 1184 aa14.54□□□□□ -0.08
RRP15-202ENST00000491428 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
RRP15-202ENST00000491428 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
RRP15-202ENST00000491428 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
RRP15-202ENST00000491428 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
RRP15-202ENST00000491428 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.1
RRP15-202ENST00000491428 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
RRP15-202ENST00000491428 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
RRP15-202ENST00000491428 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
RRP15-202ENST00000491428 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
RRP15-202ENST00000491428 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
RRP15-202ENST00000491428 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
RRP15-202ENST00000491428 EVX2Q03828 476 aa14.14□□□□□ -0.15
RRP15-202ENST00000491428 PRKAR2AP13861 404 aaKnown RBP14.12□□□□□ -0.15
RRP15-202ENST00000491428 HAX1O00165 279 aa14.11□□□□□ -0.15
RRP15-202ENST00000491428 FBXO3Q9UK99 471 aa14.09□□□□□ -0.15
RRP15-202ENST00000491428 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
RRP15-202ENST00000491428 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
RRP15-202ENST00000491428 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
RRP15-202ENST00000491428 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
RRP15-202ENST00000491428 PROM2Q8N271 834 aa13.95□□□□□ -0.18
RRP15-202ENST00000491428 C19orf67A6NJJ6 358 aa13.94□□□□□ -0.18
RRP15-202ENST00000491428 VASPP50552 380 aaPredicted RBP13.93□□□□□ -0.18
RRP15-202ENST00000491428 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
RRP15-202ENST00000491428 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
RRP15-202ENST00000491428 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
RRP15-202ENST00000491428 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
RRP15-202ENST00000491428 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
RRP15-202ENST00000491428 PKD2Q13563 968 aa13.73□□□□□ -0.21
RRP15-202ENST00000491428 GABBR2O75899 941 aa13.71□□□□□ -0.21
RRP15-202ENST00000491428 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
RRP15-202ENST00000491428 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
RRP15-202ENST00000491428 BCANQ96GW7 911 aa13.62□□□□□ -0.23
RRP15-202ENST00000491428 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
RRP15-202ENST00000491428 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
RRP15-202ENST00000491428 PRKCSHP14314 528 aaPredicted RBP13.54□□□□□ -0.24
RRP15-202ENST00000491428 POTEIP0CG38 1075 aa13.52□□□□□ -0.25
RRP15-202ENST00000491428 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
RRP15-202ENST00000491428 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms