RNA–Protein interactions for RNA: ENST00000491290.1

RAF1-210, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 4

Gene RAF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-210ENST00000491290 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
RAF1-210ENST00000491290 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
RAF1-210ENST00000491290 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
RAF1-210ENST00000491290 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
RAF1-210ENST00000491290 FOXD1Q16676 465 aa15.77■□□□□ 0.12
RAF1-210ENST00000491290 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
RAF1-210ENST00000491290 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
RAF1-210ENST00000491290 ADRA2BP18089 450 aa14.78□□□□□ -0.04
RAF1-210ENST00000491290 PIAS4Q8N2W9 510 aaPredicted RBP14.77□□□□□ -0.05
RAF1-210ENST00000491290 MSH5O43196 834 aa14.68□□□□□ -0.06
RAF1-210ENST00000491290 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
RAF1-210ENST00000491290 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
RAF1-210ENST00000491290 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
RAF1-210ENST00000491290 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
RAF1-210ENST00000491290 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
RAF1-210ENST00000491290 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
RAF1-210ENST00000491290 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
RAF1-210ENST00000491290 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
RAF1-210ENST00000491290 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
RAF1-210ENST00000491290 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
RAF1-210ENST00000491290 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
RAF1-210ENST00000491290 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
RAF1-210ENST00000491290 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
RAF1-210ENST00000491290 KCNA4P22459 653 aa12.48□□□□□ -0.41
RAF1-210ENST00000491290 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
RAF1-210ENST00000491290 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
RAF1-210ENST00000491290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.43
RAF1-210ENST00000491290 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
RAF1-210ENST00000491290 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
RAF1-210ENST00000491290 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
RAF1-210ENST00000491290 CAPN15O75808 1086 aa11.89□□□□□ -0.51
RAF1-210ENST00000491290 DSG3P32926 999 aa11.79□□□□□ -0.52
RAF1-210ENST00000491290 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
RAF1-210ENST00000491290 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
RAF1-210ENST00000491290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.53
RAF1-210ENST00000491290 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
RAF1-210ENST00000491290 APLP2Q06481 763 aa11.69□□□□□ -0.54
RAF1-210ENST00000491290 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
RAF1-210ENST00000491290 ABCB7O75027 752 aa11.66□□□□□ -0.54
RAF1-210ENST00000491290 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
RAF1-210ENST00000491290 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
RAF1-210ENST00000491290 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
RAF1-210ENST00000491290 ZBTB22O15209 634 aa11.51□□□□□ -0.57
RAF1-210ENST00000491290 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
RAF1-210ENST00000491290 POLA2Q14181 598 aa11.4□□□□□ -0.58
RAF1-210ENST00000491290 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
RAF1-210ENST00000491290 POTEHQ6S545 545 aa11.18□□□□□ -0.62
RAF1-210ENST00000491290 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
RAF1-210ENST00000491290 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
RAF1-210ENST00000491290 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
RAF1-210ENST00000491290 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
RAF1-210ENST00000491290 CSRNP3Q8WYN3 585 aa10.98□□□□□ -0.65
RAF1-210ENST00000491290 AKT1S1Q96B36 256 aa10.97□□□□□ -0.65
RAF1-210ENST00000491290 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
RAF1-210ENST00000491290 FBLN2P98095 1184 aa10.91□□□□□ -0.66
RAF1-210ENST00000491290 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
RAF1-210ENST00000491290 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
RAF1-210ENST00000491290 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
RAF1-210ENST00000491290 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
RAF1-210ENST00000491290 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
RAF1-210ENST00000491290 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
RAF1-210ENST00000491290 PIP4P2Q8N4L2 257 aa10.75□□□□□ -0.69
RAF1-210ENST00000491290 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
RAF1-210ENST00000491290 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
RAF1-210ENST00000491290 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
RAF1-210ENST00000491290 CLEC11AQ9Y240 323 aa10.62□□□□□ -0.71
RAF1-210ENST00000491290 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
RAF1-210ENST00000491290 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
RAF1-210ENST00000491290 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
RAF1-210ENST00000491290 SP7Q8TDD2 431 aaPredicted RBP10.51□□□□□ -0.73
RAF1-210ENST00000491290 HAX1O00165 279 aa10.5□□□□□ -0.73
RAF1-210ENST00000491290 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
RAF1-210ENST00000491290 EVX2Q03828 476 aa10.43□□□□□ -0.74
RAF1-210ENST00000491290 PRR29P0C7W0 189 aa10.42□□□□□ -0.74
RAF1-210ENST00000491290 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
RAF1-210ENST00000491290 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
RAF1-210ENST00000491290 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
RAF1-210ENST00000491290 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
RAF1-210ENST00000491290 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
RAF1-210ENST00000491290 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
RAF1-210ENST00000491290 GABBR2O75899 941 aa10.15□□□□□ -0.78
RAF1-210ENST00000491290 PROM2Q8N271 834 aa10.15□□□□□ -0.78
RAF1-210ENST00000491290 MNX1P50219 401 aaPredicted RBP10.06□□□□□ -0.8
RAF1-210ENST00000491290 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
RAF1-210ENST00000491290 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
RAF1-210ENST00000491290 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
RAF1-210ENST00000491290 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
RAF1-210ENST00000491290 FKBP8Q14318 412 aa9.97□□□□□ -0.81
RAF1-210ENST00000491290 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
RAF1-210ENST00000491290 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
RAF1-210ENST00000491290 GALR2O43603 387 aaPredicted RBP9.93□□□□□ -0.82
RAF1-210ENST00000491290 CLCN6P51797 869 aa9.92□□□□□ -0.82
RAF1-210ENST00000491290 MIER1Q8N108 512 aa9.88□□□□□ -0.83
RAF1-210ENST00000491290 DCBLD2Q96PD2 775 aa9.88□□□□□ -0.83
RAF1-210ENST00000491290 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
RAF1-210ENST00000491290 LHX8Q68G74 356 aa9.85□□□□□ -0.83
RAF1-210ENST00000491290 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
RAF1-210ENST00000491290 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
RAF1-210ENST00000491290 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
RAF1-210ENST00000491290 MS4A3Q96HJ5 214 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms