RNA–Protein interactions for RNA: ENST00000491038.1

GRAMD1C-214, Transcript of GRAM domain containing 1C, humanhuman

TSL 2

Gene GRAMD1C, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1C-214ENST00000491038 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
GRAMD1C-214ENST00000491038 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
GRAMD1C-214ENST00000491038 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
GRAMD1C-214ENST00000491038 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
GRAMD1C-214ENST00000491038 FOXD1Q16676 465 aa22.35■■□□□ 1.17
GRAMD1C-214ENST00000491038 POTEDQ86YR6 584 aa21■□□□□ 0.95
GRAMD1C-214ENST00000491038 MSH5O43196 834 aa20.91■□□□□ 0.94
GRAMD1C-214ENST00000491038 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
GRAMD1C-214ENST00000491038 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
GRAMD1C-214ENST00000491038 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
GRAMD1C-214ENST00000491038 ADRA2BP18089 450 aa20.64■□□□□ 0.89
GRAMD1C-214ENST00000491038 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
GRAMD1C-214ENST00000491038 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
GRAMD1C-214ENST00000491038 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
GRAMD1C-214ENST00000491038 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
GRAMD1C-214ENST00000491038 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
GRAMD1C-214ENST00000491038 CACNB1Q02641 598 aaPredicted RBP18.18■□□□□ 0.5
GRAMD1C-214ENST00000491038 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
GRAMD1C-214ENST00000491038 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
GRAMD1C-214ENST00000491038 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
GRAMD1C-214ENST00000491038 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
GRAMD1C-214ENST00000491038 C1QBPQ07021 282 aaKnown RBP17.53■□□□□ 0.4
GRAMD1C-214ENST00000491038 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
GRAMD1C-214ENST00000491038 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
GRAMD1C-214ENST00000491038 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
GRAMD1C-214ENST00000491038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.35
GRAMD1C-214ENST00000491038 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
GRAMD1C-214ENST00000491038 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
GRAMD1C-214ENST00000491038 KCNA4P22459 653 aa16.71■□□□□ 0.27
GRAMD1C-214ENST00000491038 CAPN15O75808 1086 aa16.7■□□□□ 0.26
GRAMD1C-214ENST00000491038 DSG3P32926 999 aa16.67■□□□□ 0.26
GRAMD1C-214ENST00000491038 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
GRAMD1C-214ENST00000491038 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
GRAMD1C-214ENST00000491038 POTEHQ6S545 545 aa16.38■□□□□ 0.21
GRAMD1C-214ENST00000491038 ABCB7O75027 752 aa16.36■□□□□ 0.21
GRAMD1C-214ENST00000491038 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
GRAMD1C-214ENST00000491038 APLP2Q06481 763 aa16.23■□□□□ 0.19
GRAMD1C-214ENST00000491038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
GRAMD1C-214ENST00000491038 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
GRAMD1C-214ENST00000491038 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
GRAMD1C-214ENST00000491038 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
GRAMD1C-214ENST00000491038 POLA2Q14181 598 aa15.86■□□□□ 0.13
GRAMD1C-214ENST00000491038 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
GRAMD1C-214ENST00000491038 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
GRAMD1C-214ENST00000491038 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
GRAMD1C-214ENST00000491038 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
GRAMD1C-214ENST00000491038 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
GRAMD1C-214ENST00000491038 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
GRAMD1C-214ENST00000491038 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
GRAMD1C-214ENST00000491038 ZBTB22O15209 634 aa15.4■□□□□ 0.06
GRAMD1C-214ENST00000491038 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
GRAMD1C-214ENST00000491038 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
GRAMD1C-214ENST00000491038 PIP4P2Q8N4L2 257 aa15.25■□□□□ 0.03
GRAMD1C-214ENST00000491038 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
GRAMD1C-214ENST00000491038 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
GRAMD1C-214ENST00000491038 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
GRAMD1C-214ENST00000491038 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
GRAMD1C-214ENST00000491038 HAX1O00165 279 aa15.03■□□□□ -0
GRAMD1C-214ENST00000491038 FBLN2P98095 1184 aa14.95□□□□□ -0.02
GRAMD1C-214ENST00000491038 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
GRAMD1C-214ENST00000491038 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
GRAMD1C-214ENST00000491038 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
GRAMD1C-214ENST00000491038 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
GRAMD1C-214ENST00000491038 EVX2Q03828 476 aa14.91□□□□□ -0.02
GRAMD1C-214ENST00000491038 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
GRAMD1C-214ENST00000491038 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
GRAMD1C-214ENST00000491038 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
GRAMD1C-214ENST00000491038 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
GRAMD1C-214ENST00000491038 SSUH2Q9Y2M2 353 aa14.75□□□□□ -0.05
GRAMD1C-214ENST00000491038 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
GRAMD1C-214ENST00000491038 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
GRAMD1C-214ENST00000491038 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
GRAMD1C-214ENST00000491038 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
GRAMD1C-214ENST00000491038 GABBR2O75899 941 aa14.48□□□□□ -0.09
GRAMD1C-214ENST00000491038 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
GRAMD1C-214ENST00000491038 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
GRAMD1C-214ENST00000491038 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
GRAMD1C-214ENST00000491038 LHX8Q68G74 356 aa14.27□□□□□ -0.13
GRAMD1C-214ENST00000491038 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
GRAMD1C-214ENST00000491038 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
GRAMD1C-214ENST00000491038 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
GRAMD1C-214ENST00000491038 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
GRAMD1C-214ENST00000491038 CLCN6P51797 869 aa14.03□□□□□ -0.16
GRAMD1C-214ENST00000491038 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
GRAMD1C-214ENST00000491038 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
GRAMD1C-214ENST00000491038 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
GRAMD1C-214ENST00000491038 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
GRAMD1C-214ENST00000491038 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
GRAMD1C-214ENST00000491038 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
GRAMD1C-214ENST00000491038 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
GRAMD1C-214ENST00000491038 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
GRAMD1C-214ENST00000491038 POTEB2H3BUK9 544 aa13.77□□□□□ -0.21
GRAMD1C-214ENST00000491038 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
GRAMD1C-214ENST00000491038 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
GRAMD1C-214ENST00000491038 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
GRAMD1C-214ENST00000491038 MS4A3Q96HJ5 214 aa13.68□□□□□ -0.22
GRAMD1C-214ENST00000491038 PLSCR2Q9NRY7 297 aa13.63□□□□□ -0.23
GRAMD1C-214ENST00000491038 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
GRAMD1C-214ENST00000491038 PROM2Q8N271 834 aa13.61□□□□□ -0.23
GRAMD1C-214ENST00000491038 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms