RNA–Protein interactions for RNA: ENST00000490989.1

SKIL-210, Transcript of SKI like proto-oncogene, humanhuman

TSL 3

Gene SKIL, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-210ENST00000490989 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
SKIL-210ENST00000490989 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
SKIL-210ENST00000490989 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
SKIL-210ENST00000490989 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
SKIL-210ENST00000490989 FOXD1Q16676 465 aa20.12■□□□□ 0.81
SKIL-210ENST00000490989 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
SKIL-210ENST00000490989 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
SKIL-210ENST00000490989 ADRA2BP18089 450 aa18.85■□□□□ 0.61
SKIL-210ENST00000490989 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
SKIL-210ENST00000490989 MSH5O43196 834 aa18.75■□□□□ 0.59
SKIL-210ENST00000490989 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
SKIL-210ENST00000490989 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
SKIL-210ENST00000490989 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
SKIL-210ENST00000490989 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
SKIL-210ENST00000490989 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
SKIL-210ENST00000490989 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
SKIL-210ENST00000490989 HOXD11P31277 338 aaPredicted RBP16.55■□□□□ 0.24
SKIL-210ENST00000490989 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
SKIL-210ENST00000490989 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
SKIL-210ENST00000490989 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
SKIL-210ENST00000490989 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
SKIL-210ENST00000490989 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
SKIL-210ENST00000490989 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
SKIL-210ENST00000490989 KCNA4P22459 653 aa15.94■□□□□ 0.14
SKIL-210ENST00000490989 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
SKIL-210ENST00000490989 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
SKIL-210ENST00000490989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.11
SKIL-210ENST00000490989 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
SKIL-210ENST00000490989 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
SKIL-210ENST00000490989 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
SKIL-210ENST00000490989 CAPN15O75808 1086 aa15.16■□□□□ 0.02
SKIL-210ENST00000490989 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
SKIL-210ENST00000490989 DSG3P32926 999 aa15.05■□□□□ -0
SKIL-210ENST00000490989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
SKIL-210ENST00000490989 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
SKIL-210ENST00000490989 APLP2Q06481 763 aa15.01□□□□□ -0.01
SKIL-210ENST00000490989 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
SKIL-210ENST00000490989 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
SKIL-210ENST00000490989 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
SKIL-210ENST00000490989 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
SKIL-210ENST00000490989 ABCB7O75027 752 aa14.84□□□□□ -0.03
SKIL-210ENST00000490989 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
SKIL-210ENST00000490989 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
SKIL-210ENST00000490989 ZBTB22O15209 634 aa14.68□□□□□ -0.06
SKIL-210ENST00000490989 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
SKIL-210ENST00000490989 POLA2Q14181 598 aa14.57□□□□□ -0.08
SKIL-210ENST00000490989 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
SKIL-210ENST00000490989 ATXN8OSP0DMR3 200 aa14.35□□□□□ -0.11
SKIL-210ENST00000490989 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
SKIL-210ENST00000490989 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.13
SKIL-210ENST00000490989 POTEHQ6S545 545 aa14.23□□□□□ -0.13
SKIL-210ENST00000490989 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
SKIL-210ENST00000490989 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
SKIL-210ENST00000490989 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
SKIL-210ENST00000490989 FBLN2P98095 1184 aa13.97□□□□□ -0.17
SKIL-210ENST00000490989 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
SKIL-210ENST00000490989 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
SKIL-210ENST00000490989 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
SKIL-210ENST00000490989 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
SKIL-210ENST00000490989 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
SKIL-210ENST00000490989 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
SKIL-210ENST00000490989 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
SKIL-210ENST00000490989 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
SKIL-210ENST00000490989 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
SKIL-210ENST00000490989 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
SKIL-210ENST00000490989 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
SKIL-210ENST00000490989 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
SKIL-210ENST00000490989 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
SKIL-210ENST00000490989 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
SKIL-210ENST00000490989 HAX1O00165 279 aa13.4□□□□□ -0.26
SKIL-210ENST00000490989 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
SKIL-210ENST00000490989 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
SKIL-210ENST00000490989 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
SKIL-210ENST00000490989 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
SKIL-210ENST00000490989 EVX2Q03828 476 aa13.26□□□□□ -0.29
SKIL-210ENST00000490989 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
SKIL-210ENST00000490989 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
SKIL-210ENST00000490989 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
SKIL-210ENST00000490989 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
SKIL-210ENST00000490989 PROM2Q8N271 834 aa13.01□□□□□ -0.33
SKIL-210ENST00000490989 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
SKIL-210ENST00000490989 GABBR2O75899 941 aa12.96□□□□□ -0.33
SKIL-210ENST00000490989 FKBP8Q14318 412 aa12.95□□□□□ -0.34
SKIL-210ENST00000490989 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
SKIL-210ENST00000490989 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
SKIL-210ENST00000490989 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
SKIL-210ENST00000490989 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
SKIL-210ENST00000490989 CLCN6P51797 869 aa12.76□□□□□ -0.37
SKIL-210ENST00000490989 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
SKIL-210ENST00000490989 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
SKIL-210ENST00000490989 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
SKIL-210ENST00000490989 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
SKIL-210ENST00000490989 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
SKIL-210ENST00000490989 MIER1Q8N108 512 aa12.67□□□□□ -0.38
SKIL-210ENST00000490989 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
SKIL-210ENST00000490989 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
SKIL-210ENST00000490989 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
SKIL-210ENST00000490989 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
SKIL-210ENST00000490989 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
SKIL-210ENST00000490989 LHX8Q68G74 356 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms