RNA–Protein interactions for RNA: ENST00000490745.5

PLSCR1-217, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-217ENST00000490745 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
PLSCR1-217ENST00000490745 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
PLSCR1-217ENST00000490745 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
PLSCR1-217ENST00000490745 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
PLSCR1-217ENST00000490745 FOXD1Q16676 465 aa19.96■□□□□ 0.79
PLSCR1-217ENST00000490745 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
PLSCR1-217ENST00000490745 PIAS4Q8N2W9 510 aaPredicted RBP18.8■□□□□ 0.6
PLSCR1-217ENST00000490745 ADRA2BP18089 450 aa18.76■□□□□ 0.59
PLSCR1-217ENST00000490745 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
PLSCR1-217ENST00000490745 MSH5O43196 834 aa18.75■□□□□ 0.59
PLSCR1-217ENST00000490745 POTEDQ86YR6 584 aa17.83■□□□□ 0.44
PLSCR1-217ENST00000490745 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
PLSCR1-217ENST00000490745 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
PLSCR1-217ENST00000490745 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
PLSCR1-217ENST00000490745 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
PLSCR1-217ENST00000490745 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
PLSCR1-217ENST00000490745 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
PLSCR1-217ENST00000490745 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
PLSCR1-217ENST00000490745 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
PLSCR1-217ENST00000490745 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
PLSCR1-217ENST00000490745 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
PLSCR1-217ENST00000490745 KCNA4P22459 653 aa16.02■□□□□ 0.16
PLSCR1-217ENST00000490745 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
PLSCR1-217ENST00000490745 CACNB1Q02641 598 aaPredicted RBP15.95■□□□□ 0.14
PLSCR1-217ENST00000490745 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
PLSCR1-217ENST00000490745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
PLSCR1-217ENST00000490745 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
PLSCR1-217ENST00000490745 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
PLSCR1-217ENST00000490745 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
PLSCR1-217ENST00000490745 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
PLSCR1-217ENST00000490745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
PLSCR1-217ENST00000490745 APLP2Q06481 763 aa15.23■□□□□ 0.03
PLSCR1-217ENST00000490745 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
PLSCR1-217ENST00000490745 CAPN15O75808 1086 aa15.19■□□□□ 0.02
PLSCR1-217ENST00000490745 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
PLSCR1-217ENST00000490745 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
PLSCR1-217ENST00000490745 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
PLSCR1-217ENST00000490745 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
PLSCR1-217ENST00000490745 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
PLSCR1-217ENST00000490745 DSG3P32926 999 aa14.98□□□□□ -0.01
PLSCR1-217ENST00000490745 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
PLSCR1-217ENST00000490745 ABCB7O75027 752 aa14.8□□□□□ -0.04
PLSCR1-217ENST00000490745 ZBTB22O15209 634 aa14.66□□□□□ -0.06
PLSCR1-217ENST00000490745 POLA2Q14181 598 aa14.59□□□□□ -0.07
PLSCR1-217ENST00000490745 ATXN8OSP0DMR3 200 aa14.52□□□□□ -0.09
PLSCR1-217ENST00000490745 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
PLSCR1-217ENST00000490745 ZBTB12Q9Y330 459 aaPredicted RBP14.44□□□□□ -0.1
PLSCR1-217ENST00000490745 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
PLSCR1-217ENST00000490745 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
PLSCR1-217ENST00000490745 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
PLSCR1-217ENST00000490745 FBLN2P98095 1184 aa14.16□□□□□ -0.14
PLSCR1-217ENST00000490745 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
PLSCR1-217ENST00000490745 AKT1S1Q96B36 256 aa14.08□□□□□ -0.16
PLSCR1-217ENST00000490745 POTEHQ6S545 545 aa14.06□□□□□ -0.16
PLSCR1-217ENST00000490745 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
PLSCR1-217ENST00000490745 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
PLSCR1-217ENST00000490745 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
PLSCR1-217ENST00000490745 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
PLSCR1-217ENST00000490745 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
PLSCR1-217ENST00000490745 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
PLSCR1-217ENST00000490745 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
PLSCR1-217ENST00000490745 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
PLSCR1-217ENST00000490745 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
PLSCR1-217ENST00000490745 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
PLSCR1-217ENST00000490745 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
PLSCR1-217ENST00000490745 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
PLSCR1-217ENST00000490745 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
PLSCR1-217ENST00000490745 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
PLSCR1-217ENST00000490745 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
PLSCR1-217ENST00000490745 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
PLSCR1-217ENST00000490745 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
PLSCR1-217ENST00000490745 HAX1O00165 279 aa13.38□□□□□ -0.27
PLSCR1-217ENST00000490745 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
PLSCR1-217ENST00000490745 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
PLSCR1-217ENST00000490745 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
PLSCR1-217ENST00000490745 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
PLSCR1-217ENST00000490745 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
PLSCR1-217ENST00000490745 EVX2Q03828 476 aa13.06□□□□□ -0.32
PLSCR1-217ENST00000490745 PROM2Q8N271 834 aa13.06□□□□□ -0.32
PLSCR1-217ENST00000490745 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
PLSCR1-217ENST00000490745 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
PLSCR1-217ENST00000490745 FKBP8Q14318 412 aa12.97□□□□□ -0.33
PLSCR1-217ENST00000490745 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
PLSCR1-217ENST00000490745 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
PLSCR1-217ENST00000490745 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
PLSCR1-217ENST00000490745 CLCN6P51797 869 aa12.9□□□□□ -0.34
PLSCR1-217ENST00000490745 GABBR2O75899 941 aa12.88□□□□□ -0.35
PLSCR1-217ENST00000490745 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
PLSCR1-217ENST00000490745 MIER1Q8N108 512 aa12.83□□□□□ -0.36
PLSCR1-217ENST00000490745 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
PLSCR1-217ENST00000490745 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
PLSCR1-217ENST00000490745 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
PLSCR1-217ENST00000490745 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
PLSCR1-217ENST00000490745 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
PLSCR1-217ENST00000490745 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
PLSCR1-217ENST00000490745 TSPYL2Q9H2G4 693 aaPredicted RBP12.65□□□□□ -0.38
PLSCR1-217ENST00000490745 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
PLSCR1-217ENST00000490745 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
PLSCR1-217ENST00000490745 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
PLSCR1-217ENST00000490745 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms