RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
SHTN1-205ENST00000490615 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
SHTN1-205ENST00000490615 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
SHTN1-205ENST00000490615 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
SHTN1-205ENST00000490615 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
SHTN1-205ENST00000490615 FOXD1Q16676 465 aa14.82□□□□□ -0.04
SHTN1-205ENST00000490615 ADRA2BP18089 450 aa14.55□□□□□ -0.08
SHTN1-205ENST00000490615 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
SHTN1-205ENST00000490615 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
SHTN1-205ENST00000490615 KCNA4P22459 653 aa13.69□□□□□ -0.22
SHTN1-205ENST00000490615 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
SHTN1-205ENST00000490615 MSH5O43196 834 aa13.49□□□□□ -0.25
SHTN1-205ENST00000490615 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
SHTN1-205ENST00000490615 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
SHTN1-205ENST00000490615 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
SHTN1-205ENST00000490615 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
SHTN1-205ENST00000490615 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
SHTN1-205ENST00000490615 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
SHTN1-205ENST00000490615 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
SHTN1-205ENST00000490615 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
SHTN1-205ENST00000490615 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
SHTN1-205ENST00000490615 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
SHTN1-205ENST00000490615 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
SHTN1-205ENST00000490615 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
SHTN1-205ENST00000490615 ZBTB22O15209 634 aa12.61□□□□□ -0.39
SHTN1-205ENST00000490615 FOXD4L1Q9NU39 408 aa12.47□□□□□ -0.41
SHTN1-205ENST00000490615 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
SHTN1-205ENST00000490615 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
SHTN1-205ENST00000490615 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
SHTN1-205ENST00000490615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHTN1-205ENST00000490615 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
SHTN1-205ENST00000490615 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
SHTN1-205ENST00000490615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
SHTN1-205ENST00000490615 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
SHTN1-205ENST00000490615 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
SHTN1-205ENST00000490615 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
SHTN1-205ENST00000490615 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
SHTN1-205ENST00000490615 APLP2Q06481 763 aa11.62□□□□□ -0.55
SHTN1-205ENST00000490615 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
SHTN1-205ENST00000490615 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
SHTN1-205ENST00000490615 FKBP8Q14318 412 aa11.54□□□□□ -0.56
SHTN1-205ENST00000490615 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
SHTN1-205ENST00000490615 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
SHTN1-205ENST00000490615 C1QBPQ07021 282 aaKnown RBP11.48□□□□□ -0.57
SHTN1-205ENST00000490615 CAPN15O75808 1086 aa11.45□□□□□ -0.58
SHTN1-205ENST00000490615 POLA2Q14181 598 aa11.37□□□□□ -0.59
SHTN1-205ENST00000490615 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
SHTN1-205ENST00000490615 ABCB7O75027 752 aa11.27□□□□□ -0.61
SHTN1-205ENST00000490615 FBLN2P98095 1184 aa11.26□□□□□ -0.61
SHTN1-205ENST00000490615 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
SHTN1-205ENST00000490615 DSG3P32926 999 aa11.18□□□□□ -0.62
SHTN1-205ENST00000490615 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
SHTN1-205ENST00000490615 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
SHTN1-205ENST00000490615 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
SHTN1-205ENST00000490615 PROM2Q8N271 834 aa11.05□□□□□ -0.64
SHTN1-205ENST00000490615 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
SHTN1-205ENST00000490615 FBXO3Q9UK99 471 aa11□□□□□ -0.65
SHTN1-205ENST00000490615 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
SHTN1-205ENST00000490615 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
SHTN1-205ENST00000490615 ZNF692Q9BU19 519 aaPredicted RBP10.92□□□□□ -0.66
SHTN1-205ENST00000490615 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
SHTN1-205ENST00000490615 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
SHTN1-205ENST00000490615 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
SHTN1-205ENST00000490615 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
SHTN1-205ENST00000490615 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
SHTN1-205ENST00000490615 PABPN1Q86U42 306 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHTN1-205ENST00000490615 IFNLR1Q8IU57 520 aaPredicted RBP10.77□□□□□ -0.69
SHTN1-205ENST00000490615 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
SHTN1-205ENST00000490615 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
SHTN1-205ENST00000490615 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
SHTN1-205ENST00000490615 MIER1Q8N108 512 aa10.6□□□□□ -0.71
SHTN1-205ENST00000490615 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
SHTN1-205ENST00000490615 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
SHTN1-205ENST00000490615 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
SHTN1-205ENST00000490615 PKD2Q13563 968 aa10.53□□□□□ -0.72
SHTN1-205ENST00000490615 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
SHTN1-205ENST00000490615 REM2Q8IYK8 340 aaPredicted RBP10.48□□□□□ -0.73
SHTN1-205ENST00000490615 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
SHTN1-205ENST00000490615 CLEC11AQ9Y240 323 aa10.46□□□□□ -0.73
SHTN1-205ENST00000490615 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
SHTN1-205ENST00000490615 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
SHTN1-205ENST00000490615 PRR29P0C7W0 189 aa10.4□□□□□ -0.74
SHTN1-205ENST00000490615 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
SHTN1-205ENST00000490615 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
SHTN1-205ENST00000490615 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
SHTN1-205ENST00000490615 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
SHTN1-205ENST00000490615 RGL2O15211 777 aa10.3□□□□□ -0.76
SHTN1-205ENST00000490615 NUBP1P53384 320 aa10.3□□□□□ -0.76
SHTN1-205ENST00000490615 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
SHTN1-205ENST00000490615 PLCB2Q00722 1185 aa10.24□□□□□ -0.77
SHTN1-205ENST00000490615 GSE1Q14687 1217 aa10.24□□□□□ -0.77
SHTN1-205ENST00000490615 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
SHTN1-205ENST00000490615 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
SHTN1-205ENST00000490615 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
SHTN1-205ENST00000490615 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
SHTN1-205ENST00000490615 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
SHTN1-205ENST00000490615 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
SHTN1-205ENST00000490615 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
SHTN1-205ENST00000490615 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
SHTN1-205ENST00000490615 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms