RNA–Protein interactions for RNA: ENST00000490190.1

LAMA1-205, Transcript of laminin subunit alpha 1, humanhuman

TSL 5

Gene LAMA1, Length 655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-205ENST00000490190 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
LAMA1-205ENST00000490190 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
LAMA1-205ENST00000490190 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
LAMA1-205ENST00000490190 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
LAMA1-205ENST00000490190 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
LAMA1-205ENST00000490190 FOXD1Q16676 465 aa23.45■■□□□ 1.34
LAMA1-205ENST00000490190 PPP6R1Q9UPN7 881 aa22.64■■□□□ 1.21
LAMA1-205ENST00000490190 ADRA2BP18089 450 aa22.61■■□□□ 1.21
LAMA1-205ENST00000490190 PIAS4Q8N2W9 510 aaPredicted RBP22.08■■□□□ 1.13
LAMA1-205ENST00000490190 MSH5O43196 834 aa21.47■■□□□ 1.03
LAMA1-205ENST00000490190 PPP4R3CPQ6ZMV5 832 aa20.81■□□□□ 0.92
LAMA1-205ENST00000490190 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
LAMA1-205ENST00000490190 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
LAMA1-205ENST00000490190 KCNA4P22459 653 aa20.42■□□□□ 0.86
LAMA1-205ENST00000490190 CNKSR2Q8WXI2 1034 aa20.16■□□□□ 0.82
LAMA1-205ENST00000490190 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
LAMA1-205ENST00000490190 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
LAMA1-205ENST00000490190 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
LAMA1-205ENST00000490190 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
LAMA1-205ENST00000490190 HOXD11P31277 338 aaPredicted RBP19.7■□□□□ 0.74
LAMA1-205ENST00000490190 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
LAMA1-205ENST00000490190 SLC4A1APQ9BWU0 796 aaKnown RBP19.38■□□□□ 0.69
LAMA1-205ENST00000490190 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
LAMA1-205ENST00000490190 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
LAMA1-205ENST00000490190 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
LAMA1-205ENST00000490190 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
LAMA1-205ENST00000490190 ZBTB22O15209 634 aa18.84■□□□□ 0.61
LAMA1-205ENST00000490190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.77■□□□□ 0.6
LAMA1-205ENST00000490190 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
LAMA1-205ENST00000490190 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
LAMA1-205ENST00000490190 U3KPZ7 1027 aaPredicted RBP18.54■□□□□ 0.56
LAMA1-205ENST00000490190 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
LAMA1-205ENST00000490190 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
LAMA1-205ENST00000490190 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
LAMA1-205ENST00000490190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
LAMA1-205ENST00000490190 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
LAMA1-205ENST00000490190 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
LAMA1-205ENST00000490190 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
LAMA1-205ENST00000490190 SPINK5Q9NQ38 1064 aaPredicted RBP18.05■□□□□ 0.48
LAMA1-205ENST00000490190 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
LAMA1-205ENST00000490190 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
LAMA1-205ENST00000490190 CAPN15O75808 1086 aa17.9■□□□□ 0.46
LAMA1-205ENST00000490190 APLP2Q06481 763 aa17.89■□□□□ 0.45
LAMA1-205ENST00000490190 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
LAMA1-205ENST00000490190 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
LAMA1-205ENST00000490190 ABCB7O75027 752 aa17.64■□□□□ 0.41
LAMA1-205ENST00000490190 DSG3P32926 999 aa17.61■□□□□ 0.41
LAMA1-205ENST00000490190 POLA2Q14181 598 aa17.56■□□□□ 0.4
LAMA1-205ENST00000490190 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
LAMA1-205ENST00000490190 FBLN2P98095 1184 aa17.12■□□□□ 0.33
LAMA1-205ENST00000490190 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
LAMA1-205ENST00000490190 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
LAMA1-205ENST00000490190 FKBP8Q14318 412 aa16.87■□□□□ 0.29
LAMA1-205ENST00000490190 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
LAMA1-205ENST00000490190 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
LAMA1-205ENST00000490190 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
LAMA1-205ENST00000490190 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
LAMA1-205ENST00000490190 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
LAMA1-205ENST00000490190 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
LAMA1-205ENST00000490190 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
LAMA1-205ENST00000490190 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
LAMA1-205ENST00000490190 PROM2Q8N271 834 aa16.52■□□□□ 0.24
LAMA1-205ENST00000490190 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
LAMA1-205ENST00000490190 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
LAMA1-205ENST00000490190 PITPNM1O00562 1244 aa16.25■□□□□ 0.19
LAMA1-205ENST00000490190 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
LAMA1-205ENST00000490190 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
LAMA1-205ENST00000490190 STAG3Q9UJ98 1225 aa16.12■□□□□ 0.17
LAMA1-205ENST00000490190 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
LAMA1-205ENST00000490190 CHRDL2Q6WN34 429 aa16.05■□□□□ 0.16
LAMA1-205ENST00000490190 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
LAMA1-205ENST00000490190 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
LAMA1-205ENST00000490190 MIER1Q8N108 512 aa15.91■□□□□ 0.14
LAMA1-205ENST00000490190 FXR2P51116 673 aaKnown RBP eCLIP15.9■□□□□ 0.14
LAMA1-205ENST00000490190 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
LAMA1-205ENST00000490190 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
LAMA1-205ENST00000490190 PIP4P2Q8N4L2 257 aa15.89■□□□□ 0.13
LAMA1-205ENST00000490190 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
LAMA1-205ENST00000490190 IFNLR1Q8IU57 520 aaPredicted RBP15.84■□□□□ 0.13
LAMA1-205ENST00000490190 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
LAMA1-205ENST00000490190 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
LAMA1-205ENST00000490190 KLHL34Q8N239 644 aa15.71■□□□□ 0.11
LAMA1-205ENST00000490190 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
LAMA1-205ENST00000490190 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
LAMA1-205ENST00000490190 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
LAMA1-205ENST00000490190 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
LAMA1-205ENST00000490190 NUBP1P53384 320 aa15.54■□□□□ 0.08
LAMA1-205ENST00000490190 POTEHQ6S545 545 aa15.53■□□□□ 0.08
LAMA1-205ENST00000490190 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
LAMA1-205ENST00000490190 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
LAMA1-205ENST00000490190 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
LAMA1-205ENST00000490190 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
LAMA1-205ENST00000490190 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
LAMA1-205ENST00000490190 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
LAMA1-205ENST00000490190 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
LAMA1-205ENST00000490190 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
LAMA1-205ENST00000490190 HAX1O00165 279 aa15.34■□□□□ 0.05
LAMA1-205ENST00000490190 EVX2Q03828 476 aa15.34■□□□□ 0.05
LAMA1-205ENST00000490190 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
LAMA1-205ENST00000490190 PKD2Q13563 968 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms