RNA–Protein interactions for RNA: ENST00000489838.5

WDR48-210, Transcript of WD repeat domain 48, humanhuman

TSL 3

Gene WDR48, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-210ENST00000489838 AEBP2Q6ZN18 517 aaPredicted RBP31.07■■■□□ 2.56
WDR48-210ENST00000489838 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
WDR48-210ENST00000489838 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.82
WDR48-210ENST00000489838 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
WDR48-210ENST00000489838 FOXD1Q16676 465 aa24.63■■□□□ 1.53
WDR48-210ENST00000489838 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
WDR48-210ENST00000489838 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
WDR48-210ENST00000489838 ADRA2BP18089 450 aa23.01■■□□□ 1.27
WDR48-210ENST00000489838 PIAS4Q8N2W9 510 aaPredicted RBP22.96■■□□□ 1.27
WDR48-210ENST00000489838 MSH5O43196 834 aa22.95■■□□□ 1.26
WDR48-210ENST00000489838 POTEDQ86YR6 584 aa22.28■■□□□ 1.16
WDR48-210ENST00000489838 MAPK8IP2Q13387 824 aaPredicted RBP21.11■□□□□ 0.97
WDR48-210ENST00000489838 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
WDR48-210ENST00000489838 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
WDR48-210ENST00000489838 PPP4R3CPQ6ZMV5 832 aa20.71■□□□□ 0.91
WDR48-210ENST00000489838 CNKSR2Q8WXI2 1034 aa20.3■□□□□ 0.84
WDR48-210ENST00000489838 HOXD11P31277 338 aaPredicted RBP20.29■□□□□ 0.84
WDR48-210ENST00000489838 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
WDR48-210ENST00000489838 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
WDR48-210ENST00000489838 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
WDR48-210ENST00000489838 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
WDR48-210ENST00000489838 RNF39Q9H2S5 420 aa19.65■□□□□ 0.74
WDR48-210ENST00000489838 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
WDR48-210ENST00000489838 CACNB1Q02641 598 aaPredicted RBP19.57■□□□□ 0.72
WDR48-210ENST00000489838 KCNA4P22459 653 aa19.39■□□□□ 0.69
WDR48-210ENST00000489838 C1QBPQ07021 282 aaKnown RBP19.33■□□□□ 0.68
WDR48-210ENST00000489838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
WDR48-210ENST00000489838 U3KPZ7 1027 aaPredicted RBP18.92■□□□□ 0.62
WDR48-210ENST00000489838 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
WDR48-210ENST00000489838 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
WDR48-210ENST00000489838 CAPN15O75808 1086 aa18.44■□□□□ 0.54
WDR48-210ENST00000489838 DSG3P32926 999 aa18.44■□□□□ 0.54
WDR48-210ENST00000489838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
WDR48-210ENST00000489838 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
WDR48-210ENST00000489838 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
WDR48-210ENST00000489838 APLP2Q06481 763 aa18.25■□□□□ 0.51
WDR48-210ENST00000489838 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
WDR48-210ENST00000489838 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
WDR48-210ENST00000489838 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
WDR48-210ENST00000489838 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
WDR48-210ENST00000489838 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
WDR48-210ENST00000489838 ABCB7O75027 752 aa18.04■□□□□ 0.48
WDR48-210ENST00000489838 ZBTB22O15209 634 aa17.89■□□□□ 0.45
WDR48-210ENST00000489838 ATF5Q9Y2D1 282 aaPredicted RBP17.8■□□□□ 0.44
WDR48-210ENST00000489838 POLA2Q14181 598 aa17.75■□□□□ 0.43
WDR48-210ENST00000489838 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
WDR48-210ENST00000489838 ATXN8OSP0DMR3 200 aa17.49■□□□□ 0.39
WDR48-210ENST00000489838 POTEHQ6S545 545 aa17.44■□□□□ 0.38
WDR48-210ENST00000489838 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
WDR48-210ENST00000489838 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
WDR48-210ENST00000489838 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
WDR48-210ENST00000489838 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
WDR48-210ENST00000489838 AKT1S1Q96B36 256 aa17.16■□□□□ 0.34
WDR48-210ENST00000489838 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
WDR48-210ENST00000489838 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
WDR48-210ENST00000489838 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
WDR48-210ENST00000489838 FBLN2P98095 1184 aa16.96■□□□□ 0.31
WDR48-210ENST00000489838 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
WDR48-210ENST00000489838 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
WDR48-210ENST00000489838 SPDYE2Q495Y8 402 aa16.89■□□□□ 0.29
WDR48-210ENST00000489838 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
WDR48-210ENST00000489838 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
WDR48-210ENST00000489838 PIP4P2Q8N4L2 257 aa16.74■□□□□ 0.27
WDR48-210ENST00000489838 FXR2P51116 673 aaKnown RBP eCLIP16.7■□□□□ 0.26
WDR48-210ENST00000489838 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
WDR48-210ENST00000489838 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
WDR48-210ENST00000489838 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
WDR48-210ENST00000489838 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
WDR48-210ENST00000489838 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
WDR48-210ENST00000489838 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
WDR48-210ENST00000489838 HAX1O00165 279 aa16.31■□□□□ 0.2
WDR48-210ENST00000489838 EVX2Q03828 476 aa16.27■□□□□ 0.2
WDR48-210ENST00000489838 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
WDR48-210ENST00000489838 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
WDR48-210ENST00000489838 C19orf67A6NJJ6 358 aa16.15■□□□□ 0.18
WDR48-210ENST00000489838 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
WDR48-210ENST00000489838 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
WDR48-210ENST00000489838 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
WDR48-210ENST00000489838 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
WDR48-210ENST00000489838 PROM2Q8N271 834 aa15.93■□□□□ 0.14
WDR48-210ENST00000489838 GABBR2O75899 941 aa15.86■□□□□ 0.13
WDR48-210ENST00000489838 CD44P16070 742 aaKnown RBP15.83■□□□□ 0.12
WDR48-210ENST00000489838 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
WDR48-210ENST00000489838 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
WDR48-210ENST00000489838 CLCN6P51797 869 aa15.62■□□□□ 0.09
WDR48-210ENST00000489838 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
WDR48-210ENST00000489838 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
WDR48-210ENST00000489838 FKBP8Q14318 412 aa15.56■□□□□ 0.08
WDR48-210ENST00000489838 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
WDR48-210ENST00000489838 GALR2O43603 387 aaPredicted RBP15.45■□□□□ 0.06
WDR48-210ENST00000489838 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
WDR48-210ENST00000489838 PHF12Q96QT6 1004 aa15.44■□□□□ 0.06
WDR48-210ENST00000489838 LHX8Q68G74 356 aa15.36■□□□□ 0.05
WDR48-210ENST00000489838 DCBLD2Q96PD2 775 aa15.35■□□□□ 0.05
WDR48-210ENST00000489838 MIER1Q8N108 512 aa15.33■□□□□ 0.04
WDR48-210ENST00000489838 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
WDR48-210ENST00000489838 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
WDR48-210ENST00000489838 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
WDR48-210ENST00000489838 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
WDR48-210ENST00000489838 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms