RNA–Protein interactions for RNA: ENST00000489694.5

RARB-208, Transcript of retinoic acid receptor beta, humanhuman

TSL 4

Gene RARB, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-208ENST00000489694 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
RARB-208ENST00000489694 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
RARB-208ENST00000489694 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
RARB-208ENST00000489694 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
RARB-208ENST00000489694 FOXD1Q16676 465 aa16.52■□□□□ 0.24
RARB-208ENST00000489694 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
RARB-208ENST00000489694 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
RARB-208ENST00000489694 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
RARB-208ENST00000489694 MSH5O43196 834 aa15.44■□□□□ 0.06
RARB-208ENST00000489694 ADRA2BP18089 450 aa15.44■□□□□ 0.06
RARB-208ENST00000489694 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
RARB-208ENST00000489694 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
RARB-208ENST00000489694 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
RARB-208ENST00000489694 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
RARB-208ENST00000489694 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
RARB-208ENST00000489694 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
RARB-208ENST00000489694 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
RARB-208ENST00000489694 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
RARB-208ENST00000489694 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
RARB-208ENST00000489694 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
RARB-208ENST00000489694 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
RARB-208ENST00000489694 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
RARB-208ENST00000489694 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
RARB-208ENST00000489694 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
RARB-208ENST00000489694 KCNA4P22459 653 aa13.02□□□□□ -0.33
RARB-208ENST00000489694 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
RARB-208ENST00000489694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.34
RARB-208ENST00000489694 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
RARB-208ENST00000489694 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
RARB-208ENST00000489694 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
RARB-208ENST00000489694 CAPN15O75808 1086 aa12.44□□□□□ -0.42
RARB-208ENST00000489694 DSG3P32926 999 aa12.36□□□□□ -0.43
RARB-208ENST00000489694 APLP2Q06481 763 aa12.35□□□□□ -0.43
RARB-208ENST00000489694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
RARB-208ENST00000489694 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
RARB-208ENST00000489694 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
RARB-208ENST00000489694 SAMD1Q6SPF0 538 aaPredicted RBP12.28□□□□□ -0.44
RARB-208ENST00000489694 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
RARB-208ENST00000489694 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
RARB-208ENST00000489694 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
RARB-208ENST00000489694 ABCB7O75027 752 aa12.17□□□□□ -0.46
RARB-208ENST00000489694 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
RARB-208ENST00000489694 ZBTB22O15209 634 aa11.99□□□□□ -0.49
RARB-208ENST00000489694 POLA2Q14181 598 aa11.93□□□□□ -0.5
RARB-208ENST00000489694 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
RARB-208ENST00000489694 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
RARB-208ENST00000489694 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
RARB-208ENST00000489694 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
RARB-208ENST00000489694 POTEHQ6S545 545 aa11.73□□□□□ -0.53
RARB-208ENST00000489694 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
RARB-208ENST00000489694 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
RARB-208ENST00000489694 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
RARB-208ENST00000489694 FBLN2P98095 1184 aa11.47□□□□□ -0.57
RARB-208ENST00000489694 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
RARB-208ENST00000489694 REM2Q8IYK8 340 aaPredicted RBP11.42□□□□□ -0.58
RARB-208ENST00000489694 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
RARB-208ENST00000489694 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
RARB-208ENST00000489694 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
RARB-208ENST00000489694 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
RARB-208ENST00000489694 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
RARB-208ENST00000489694 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
RARB-208ENST00000489694 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
RARB-208ENST00000489694 SSUH2Q9Y2M2 353 aa11.24□□□□□ -0.61
RARB-208ENST00000489694 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
RARB-208ENST00000489694 FXR2P51116 673 aaKnown RBP eCLIP11.2□□□□□ -0.62
RARB-208ENST00000489694 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
RARB-208ENST00000489694 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
RARB-208ENST00000489694 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
RARB-208ENST00000489694 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
RARB-208ENST00000489694 HAX1O00165 279 aa11.01□□□□□ -0.65
RARB-208ENST00000489694 PRKAR2AP13861 404 aaKnown RBP11.01□□□□□ -0.65
RARB-208ENST00000489694 PRR29P0C7W0 189 aa10.93□□□□□ -0.66
RARB-208ENST00000489694 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
RARB-208ENST00000489694 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
RARB-208ENST00000489694 EVX2Q03828 476 aa10.87□□□□□ -0.67
RARB-208ENST00000489694 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
RARB-208ENST00000489694 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
RARB-208ENST00000489694 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
RARB-208ENST00000489694 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
RARB-208ENST00000489694 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
RARB-208ENST00000489694 PROM2Q8N271 834 aa10.66□□□□□ -0.7
RARB-208ENST00000489694 GABBR2O75899 941 aa10.64□□□□□ -0.71
RARB-208ENST00000489694 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
RARB-208ENST00000489694 ZNF579Q8NAF0 562 aaKnown RBP10.53□□□□□ -0.72
RARB-208ENST00000489694 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
RARB-208ENST00000489694 CLCN6P51797 869 aa10.51□□□□□ -0.73
RARB-208ENST00000489694 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
RARB-208ENST00000489694 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
RARB-208ENST00000489694 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
RARB-208ENST00000489694 FKBP8Q14318 412 aa10.41□□□□□ -0.74
RARB-208ENST00000489694 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
RARB-208ENST00000489694 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
RARB-208ENST00000489694 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
RARB-208ENST00000489694 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
RARB-208ENST00000489694 MIER1Q8N108 512 aa10.35□□□□□ -0.75
RARB-208ENST00000489694 LHX8Q68G74 356 aa10.33□□□□□ -0.76
RARB-208ENST00000489694 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
RARB-208ENST00000489694 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
RARB-208ENST00000489694 CCDC61Q9Y6R9 512 aa10.27□□□□□ -0.77
RARB-208ENST00000489694 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms