RNA–Protein interactions for RNA: ENST00000489359.1

LIPA-208, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 2

Gene LIPA, Length 461 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-208ENST00000489359 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
LIPA-208ENST00000489359 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
LIPA-208ENST00000489359 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
LIPA-208ENST00000489359 SENP3Q9H4L4 574 aaPredicted RBP17.32■□□□□ 0.36
LIPA-208ENST00000489359 FOXD1Q16676 465 aa16.27■□□□□ 0.2
LIPA-208ENST00000489359 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
LIPA-208ENST00000489359 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
LIPA-208ENST00000489359 ADRA2BP18089 450 aa15.47■□□□□ 0.07
LIPA-208ENST00000489359 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
LIPA-208ENST00000489359 MSH5O43196 834 aa14.92□□□□□ -0.02
LIPA-208ENST00000489359 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
LIPA-208ENST00000489359 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
LIPA-208ENST00000489359 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
LIPA-208ENST00000489359 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
LIPA-208ENST00000489359 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
LIPA-208ENST00000489359 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
LIPA-208ENST00000489359 KCNA4P22459 653 aa13.44□□□□□ -0.26
LIPA-208ENST00000489359 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
LIPA-208ENST00000489359 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
LIPA-208ENST00000489359 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
LIPA-208ENST00000489359 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
LIPA-208ENST00000489359 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
LIPA-208ENST00000489359 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
LIPA-208ENST00000489359 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
LIPA-208ENST00000489359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIPA-208ENST00000489359 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
LIPA-208ENST00000489359 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
LIPA-208ENST00000489359 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
LIPA-208ENST00000489359 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
LIPA-208ENST00000489359 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
LIPA-208ENST00000489359 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
LIPA-208ENST00000489359 ZBTB22O15209 634 aa12.43□□□□□ -0.42
LIPA-208ENST00000489359 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
LIPA-208ENST00000489359 CAPN15O75808 1086 aa12.32□□□□□ -0.44
LIPA-208ENST00000489359 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
LIPA-208ENST00000489359 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
LIPA-208ENST00000489359 DSG3P32926 999 aa12.17□□□□□ -0.46
LIPA-208ENST00000489359 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
LIPA-208ENST00000489359 ABCB7O75027 752 aa12.16□□□□□ -0.46
LIPA-208ENST00000489359 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
LIPA-208ENST00000489359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
LIPA-208ENST00000489359 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
LIPA-208ENST00000489359 EHMT2Q96KQ7 1210 aa12.12□□□□□ -0.47
LIPA-208ENST00000489359 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
LIPA-208ENST00000489359 APLP2Q06481 763 aa12.04□□□□□ -0.48
LIPA-208ENST00000489359 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
LIPA-208ENST00000489359 POLA2Q14181 598 aa11.92□□□□□ -0.5
LIPA-208ENST00000489359 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
LIPA-208ENST00000489359 POTEHQ6S545 545 aa11.62□□□□□ -0.55
LIPA-208ENST00000489359 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
LIPA-208ENST00000489359 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
LIPA-208ENST00000489359 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
LIPA-208ENST00000489359 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
LIPA-208ENST00000489359 FBLN2P98095 1184 aa11.43□□□□□ -0.58
LIPA-208ENST00000489359 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
LIPA-208ENST00000489359 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
LIPA-208ENST00000489359 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
LIPA-208ENST00000489359 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
LIPA-208ENST00000489359 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
LIPA-208ENST00000489359 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
LIPA-208ENST00000489359 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.61
LIPA-208ENST00000489359 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
LIPA-208ENST00000489359 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
LIPA-208ENST00000489359 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIPA-208ENST00000489359 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
LIPA-208ENST00000489359 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
LIPA-208ENST00000489359 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
LIPA-208ENST00000489359 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
LIPA-208ENST00000489359 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
LIPA-208ENST00000489359 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
LIPA-208ENST00000489359 FKBP8Q14318 412 aa10.9□□□□□ -0.66
LIPA-208ENST00000489359 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
LIPA-208ENST00000489359 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
LIPA-208ENST00000489359 PROM2Q8N271 834 aa10.83□□□□□ -0.68
LIPA-208ENST00000489359 EVX2Q03828 476 aa10.78□□□□□ -0.68
LIPA-208ENST00000489359 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
LIPA-208ENST00000489359 HAX1O00165 279 aa10.74□□□□□ -0.69
LIPA-208ENST00000489359 SP7Q8TDD2 431 aaPredicted RBP10.72□□□□□ -0.69
LIPA-208ENST00000489359 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
LIPA-208ENST00000489359 FARP1Q9Y4F1 1045 aaPredicted RBP10.67□□□□□ -0.7
LIPA-208ENST00000489359 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
LIPA-208ENST00000489359 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
LIPA-208ENST00000489359 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
LIPA-208ENST00000489359 MIER1Q8N108 512 aa10.52□□□□□ -0.73
LIPA-208ENST00000489359 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
LIPA-208ENST00000489359 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
LIPA-208ENST00000489359 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
LIPA-208ENST00000489359 GABBR2O75899 941 aa10.42□□□□□ -0.74
LIPA-208ENST00000489359 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
LIPA-208ENST00000489359 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
LIPA-208ENST00000489359 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
LIPA-208ENST00000489359 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
LIPA-208ENST00000489359 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
LIPA-208ENST00000489359 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
LIPA-208ENST00000489359 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
LIPA-208ENST00000489359 PLEKHG5O94827 1062 aa10.33□□□□□ -0.76
LIPA-208ENST00000489359 NUBP1P53384 320 aa10.33□□□□□ -0.76
LIPA-208ENST00000489359 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
LIPA-208ENST00000489359 POTEIP0CG38 1075 aa10.29□□□□□ -0.76
LIPA-208ENST00000489359 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms