RNA–Protein interactions for RNA: ENST00000489281.1

DPPA4-207, Transcript of developmental pluripotency associated 4, humanhuman

TSL 4

Gene DPPA4, Length 680 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-207ENST00000489281 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
DPPA4-207ENST00000489281 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
DPPA4-207ENST00000489281 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
DPPA4-207ENST00000489281 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
DPPA4-207ENST00000489281 FOXD1Q16676 465 aa18.36■□□□□ 0.53
DPPA4-207ENST00000489281 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
DPPA4-207ENST00000489281 ADRA2BP18089 450 aa17.43■□□□□ 0.38
DPPA4-207ENST00000489281 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
DPPA4-207ENST00000489281 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
DPPA4-207ENST00000489281 MSH5O43196 834 aa17.04■□□□□ 0.32
DPPA4-207ENST00000489281 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
DPPA4-207ENST00000489281 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
DPPA4-207ENST00000489281 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
DPPA4-207ENST00000489281 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
DPPA4-207ENST00000489281 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
DPPA4-207ENST00000489281 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
DPPA4-207ENST00000489281 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
DPPA4-207ENST00000489281 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
DPPA4-207ENST00000489281 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
DPPA4-207ENST00000489281 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
DPPA4-207ENST00000489281 KCNA4P22459 653 aa15.14■□□□□ 0.01
DPPA4-207ENST00000489281 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
DPPA4-207ENST00000489281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
DPPA4-207ENST00000489281 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
DPPA4-207ENST00000489281 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
DPPA4-207ENST00000489281 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
DPPA4-207ENST00000489281 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
DPPA4-207ENST00000489281 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
DPPA4-207ENST00000489281 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
DPPA4-207ENST00000489281 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
DPPA4-207ENST00000489281 CAPN15O75808 1086 aa14.01□□□□□ -0.17
DPPA4-207ENST00000489281 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
DPPA4-207ENST00000489281 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
DPPA4-207ENST00000489281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
DPPA4-207ENST00000489281 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
DPPA4-207ENST00000489281 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
DPPA4-207ENST00000489281 ZBTB22O15209 634 aa13.91□□□□□ -0.18
DPPA4-207ENST00000489281 APLP2Q06481 763 aa13.91□□□□□ -0.18
DPPA4-207ENST00000489281 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
DPPA4-207ENST00000489281 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
DPPA4-207ENST00000489281 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
DPPA4-207ENST00000489281 DSG3P32926 999 aa13.76□□□□□ -0.21
DPPA4-207ENST00000489281 ABCB7O75027 752 aa13.73□□□□□ -0.21
DPPA4-207ENST00000489281 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
DPPA4-207ENST00000489281 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
DPPA4-207ENST00000489281 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
DPPA4-207ENST00000489281 POLA2Q14181 598 aa13.53□□□□□ -0.24
DPPA4-207ENST00000489281 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
DPPA4-207ENST00000489281 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
DPPA4-207ENST00000489281 POTEHQ6S545 545 aa13.12□□□□□ -0.31
DPPA4-207ENST00000489281 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
DPPA4-207ENST00000489281 FBLN2P98095 1184 aa13.1□□□□□ -0.31
DPPA4-207ENST00000489281 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
DPPA4-207ENST00000489281 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
DPPA4-207ENST00000489281 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
DPPA4-207ENST00000489281 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
DPPA4-207ENST00000489281 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
DPPA4-207ENST00000489281 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
DPPA4-207ENST00000489281 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
DPPA4-207ENST00000489281 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
DPPA4-207ENST00000489281 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
DPPA4-207ENST00000489281 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
DPPA4-207ENST00000489281 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
DPPA4-207ENST00000489281 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
DPPA4-207ENST00000489281 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
DPPA4-207ENST00000489281 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
DPPA4-207ENST00000489281 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
DPPA4-207ENST00000489281 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
DPPA4-207ENST00000489281 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
DPPA4-207ENST00000489281 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
DPPA4-207ENST00000489281 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
DPPA4-207ENST00000489281 FKBP8Q14318 412 aa12.34□□□□□ -0.43
DPPA4-207ENST00000489281 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
DPPA4-207ENST00000489281 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
DPPA4-207ENST00000489281 HAX1O00165 279 aa12.23□□□□□ -0.45
DPPA4-207ENST00000489281 PROM2Q8N271 834 aa12.23□□□□□ -0.45
DPPA4-207ENST00000489281 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
DPPA4-207ENST00000489281 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
DPPA4-207ENST00000489281 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
DPPA4-207ENST00000489281 EVX2Q03828 476 aa12.07□□□□□ -0.48
DPPA4-207ENST00000489281 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
DPPA4-207ENST00000489281 MIER1Q8N108 512 aa12.01□□□□□ -0.49
DPPA4-207ENST00000489281 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
DPPA4-207ENST00000489281 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
DPPA4-207ENST00000489281 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
DPPA4-207ENST00000489281 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
DPPA4-207ENST00000489281 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
DPPA4-207ENST00000489281 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
DPPA4-207ENST00000489281 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
DPPA4-207ENST00000489281 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
DPPA4-207ENST00000489281 GABBR2O75899 941 aa11.81□□□□□ -0.52
DPPA4-207ENST00000489281 VASPP50552 380 aaPredicted RBP11.8□□□□□ -0.52
DPPA4-207ENST00000489281 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
DPPA4-207ENST00000489281 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
DPPA4-207ENST00000489281 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
DPPA4-207ENST00000489281 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
DPPA4-207ENST00000489281 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
DPPA4-207ENST00000489281 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
DPPA4-207ENST00000489281 NUBP1P53384 320 aa11.67□□□□□ -0.54
DPPA4-207ENST00000489281 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms