RNA–Protein interactions for RNA: ENST00000488981.1

NF1-212, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-212ENST00000488981 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
NF1-212ENST00000488981 CHIC1Q5VXU3 224 aa12.97□□□□□ -0.33
NF1-212ENST00000488981 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
NF1-212ENST00000488981 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
NF1-212ENST00000488981 FOXD1Q16676 465 aa10.97□□□□□ -0.65
NF1-212ENST00000488981 MSH5O43196 834 aa10.5□□□□□ -0.73
NF1-212ENST00000488981 POTEDQ86YR6 584 aa10.46□□□□□ -0.73
NF1-212ENST00000488981 PLPPR3Q6T4P5 718 aa10.27□□□□□ -0.77
NF1-212ENST00000488981 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
NF1-212ENST00000488981 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
NF1-212ENST00000488981 ADRA2BP18089 450 aa10.01□□□□□ -0.81
NF1-212ENST00000488981 SCAF1Q9H7N4 1312 aaKnown RBP9.36□□□□□ -0.91
NF1-212ENST00000488981 DMRT2Q9Y5R5 561 aa9.35□□□□□ -0.91
NF1-212ENST00000488981 MAPK8IP2Q13387 824 aaPredicted RBP9.21□□□□□ -0.94
NF1-212ENST00000488981 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
NF1-212ENST00000488981 DCAF8L1A6NGE4 600 aa8.94□□□□□ -0.98
NF1-212ENST00000488981 HOXD11P31277 338 aaPredicted RBP8.92□□□□□ -0.98
NF1-212ENST00000488981 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
NF1-212ENST00000488981 RNF39Q9H2S5 420 aa8.86□□□□□ -0.99
NF1-212ENST00000488981 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
NF1-212ENST00000488981 RNF216Q9NWF9 866 aaPredicted RBP8.83□□□□□ -1
NF1-212ENST00000488981 C1QBPQ07021 282 aaKnown RBP8.78□□□□□ -1
NF1-212ENST00000488981 DNAJC5BQ9UF47 199 aa8.76□□□□□ -1.01
NF1-212ENST00000488981 NCBP3Q53F19 620 aaKnown RBP8.62□□□□□ -1.03
NF1-212ENST00000488981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.5□□□□□ -1.05
NF1-212ENST00000488981 KCNA4P22459 653 aa8.39□□□□□ -1.07
NF1-212ENST00000488981 NPM3O75607 178 aaKnown RBP8.37□□□□□ -1.07
NF1-212ENST00000488981 U3KPZ7 1027 aaPredicted RBP8.26□□□□□ -1.09
NF1-212ENST00000488981 CAPN15O75808 1086 aa8.22□□□□□ -1.09
NF1-212ENST00000488981 APLP2Q06481 763 aa8.21□□□□□ -1.1
NF1-212ENST00000488981 DSG3P32926 999 aa8.2□□□□□ -1.1
NF1-212ENST00000488981 POTEHQ6S545 545 aa8.19□□□□□ -1.1
NF1-212ENST00000488981 SPINK5Q9NQ38 1064 aaPredicted RBP8.15□□□□□ -1.1
NF1-212ENST00000488981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.12□□□□□ -1.11
NF1-212ENST00000488981 HNRNPUL2Q1KMD3 747 aaKnown RBP8.12□□□□□ -1.11
NF1-212ENST00000488981 ZNF219Q9P2Y4 722 aaPredicted RBP8.11□□□□□ -1.11
NF1-212ENST00000488981 SLC4A1APQ9BWU0 796 aaKnown RBP8.05□□□□□ -1.12
NF1-212ENST00000488981 TRHP20396 242 aaPredicted RBP8.02□□□□□ -1.13
NF1-212ENST00000488981 SAMD1Q6SPF0 538 aaPredicted RBP8.02□□□□□ -1.13
NF1-212ENST00000488981 SLC4A2P04920 1241 aa8□□□□□ -1.13
NF1-212ENST00000488981 RBM42Q9BTD8 480 aaKnown RBP7.97□□□□□ -1.13
NF1-212ENST00000488981 ABCB7O75027 752 aa7.95□□□□□ -1.14
NF1-212ENST00000488981 MYCNP04198 464 aaPredicted RBP7.84□□□□□ -1.15
NF1-212ENST00000488981 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
NF1-212ENST00000488981 CHRDL2Q6WN34 429 aa7.78□□□□□ -1.16
NF1-212ENST00000488981 POLA2Q14181 598 aa7.76□□□□□ -1.17
NF1-212ENST00000488981 ZBTB12Q9Y330 459 aaPredicted RBP7.75□□□□□ -1.17
NF1-212ENST00000488981 ATXN8OSP0DMR3 200 aa7.69□□□□□ -1.18
NF1-212ENST00000488981 CSRNP3Q8WYN3 585 aa7.69□□□□□ -1.18
NF1-212ENST00000488981 ZBTB22O15209 634 aa7.68□□□□□ -1.18
NF1-212ENST00000488981 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
NF1-212ENST00000488981 EHMT2Q96KQ7 1210 aa7.66□□□□□ -1.18
NF1-212ENST00000488981 SP7Q8TDD2 431 aaPredicted RBP7.61□□□□□ -1.19
NF1-212ENST00000488981 REM2Q8IYK8 340 aaPredicted RBP7.55□□□□□ -1.2
NF1-212ENST00000488981 OSCARQ8IYS5 282 aa7.52□□□□□ -1.21
NF1-212ENST00000488981 PIP4P2Q8N4L2 257 aa7.52□□□□□ -1.21
NF1-212ENST00000488981 ATF5Q9Y2D1 282 aaPredicted RBP7.5□□□□□ -1.21
NF1-212ENST00000488981 PITPNM1O00562 1244 aa7.47□□□□□ -1.21
NF1-212ENST00000488981 FXR2P51116 673 aaKnown RBP eCLIP7.46□□□□□ -1.22
NF1-212ENST00000488981 HAX1O00165 279 aa7.45□□□□□ -1.22
NF1-212ENST00000488981 SPDYE2BA6NHP3 402 aa7.41□□□□□ -1.22
NF1-212ENST00000488981 SPDYE6P0CI01 402 aa7.41□□□□□ -1.22
NF1-212ENST00000488981 FBLN2P98095 1184 aa7.41□□□□□ -1.22
NF1-212ENST00000488981 SPDYE2Q495Y8 402 aa7.41□□□□□ -1.22
NF1-212ENST00000488981 SPDYE1Q8NFV5 336 aaPredicted RBP7.35□□□□□ -1.23
NF1-212ENST00000488981 PRKAR2AP13861 404 aaKnown RBP7.29□□□□□ -1.24
NF1-212ENST00000488981 CLEC11AQ9Y240 323 aa7.26□□□□□ -1.25
NF1-212ENST00000488981 SSUH2Q9Y2M2 353 aa7.26□□□□□ -1.25
NF1-212ENST00000488981 ZNF692Q9BU19 519 aaPredicted RBP7.24□□□□□ -1.25
NF1-212ENST00000488981 C19orf67A6NJJ6 358 aa7.23□□□□□ -1.25
NF1-212ENST00000488981 EVX2Q03828 476 aa7.22□□□□□ -1.25
NF1-212ENST00000488981 MKRN4PQ13434 485 aaPredicted RBP7.18□□□□□ -1.26
NF1-212ENST00000488981 PRR29P0C7W0 189 aa7.15□□□□□ -1.26
NF1-212ENST00000488981 CLCN6P51797 869 aa7.15□□□□□ -1.26
NF1-212ENST00000488981 GABBR2O75899 941 aa7.14□□□□□ -1.27
NF1-212ENST00000488981 LHX8Q68G74 356 aa7.11□□□□□ -1.27
NF1-212ENST00000488981 PABPN1Q86U42 306 aaKnown RBP eCLIP7.11□□□□□ -1.27
NF1-212ENST00000488981 CHADLQ6NUI6 762 aa7.08□□□□□ -1.28
NF1-212ENST00000488981 CD44P16070 742 aaKnown RBP7.06□□□□□ -1.28
NF1-212ENST00000488981 FARP1Q9Y4F1 1045 aaPredicted RBP7.04□□□□□ -1.28
NF1-212ENST00000488981 SPDYE4A6NLX3 237 aa7.01□□□□□ -1.29
NF1-212ENST00000488981 STAG3Q9UJ98 1225 aa6.98□□□□□ -1.29
NF1-212ENST00000488981 PROM2Q8N271 834 aa6.97□□□□□ -1.29
NF1-212ENST00000488981 DCBLD2Q96PD2 775 aa6.97□□□□□ -1.29
NF1-212ENST00000488981 ZNF579Q8NAF0 562 aaKnown RBP6.96□□□□□ -1.3
NF1-212ENST00000488981 PAK3O75914 559 aaPredicted RBP6.93□□□□□ -1.3
NF1-212ENST00000488981 POTEIP0CG38 1075 aa6.93□□□□□ -1.3
NF1-212ENST00000488981 FKBP8Q14318 412 aa6.93□□□□□ -1.3
NF1-212ENST00000488981 ZRANB1Q9UGI0 708 aa6.91□□□□□ -1.3
NF1-212ENST00000488981 FBXO3Q9UK99 471 aa6.88□□□□□ -1.31
NF1-212ENST00000488981 CREBZFQ9NS37 354 aa6.87□□□□□ -1.31
NF1-212ENST00000488981 NPM1P06748 294 aaKnown RBP eCLIP6.85□□□□□ -1.31
NF1-212ENST00000488981 GALR2O43603 387 aaPredicted RBP6.82□□□□□ -1.32
NF1-212ENST00000488981 PLSCR2Q9NRY7 297 aa6.8□□□□□ -1.32
NF1-212ENST00000488981 OTUD5Q96G74 571 aa6.75□□□□□ -1.33
NF1-212ENST00000488981 PHF12Q96QT6 1004 aa6.75□□□□□ -1.33
NF1-212ENST00000488981 MAMSTRQ6ZN01 415 aa6.74□□□□□ -1.33
NF1-212ENST00000488981 PLEKHG5O94827 1062 aa6.73□□□□□ -1.33
NF1-212ENST00000488981 SLC39A7Q92504 469 aa6.73□□□□□ -1.33
NF1-212ENST00000488981 C7P10643 843 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms