RNA–Protein interactions for RNA: ENST00000488913.1

PATJ-209, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 3

Gene PATJ, Length 532 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-209ENST00000488913 AEBP2Q6ZN18 517 aaPredicted RBP34.98■■■■□ 3.19
PATJ-209ENST00000488913 CHIC1Q5VXU3 224 aa33.47■■■□□ 2.95
PATJ-209ENST00000488913 SENP3Q9H4L4 574 aaPredicted RBP29.77■■■□□ 2.36
PATJ-209ENST00000488913 PHF23Q9BUL5 403 aaPredicted RBP29.48■■■□□ 2.31
PATJ-209ENST00000488913 FOXD1Q16676 465 aa27.74■■■□□ 2.03
PATJ-209ENST00000488913 PLPPR3Q6T4P5 718 aa26.88■■□□□ 1.89
PATJ-209ENST00000488913 PPP6R1Q9UPN7 881 aa26.19■■□□□ 1.78
PATJ-209ENST00000488913 ADRA2BP18089 450 aa26.15■■□□□ 1.78
PATJ-209ENST00000488913 PIAS4Q8N2W9 510 aaPredicted RBP26.02■■□□□ 1.76
PATJ-209ENST00000488913 MSH5O43196 834 aa25.82■■□□□ 1.72
PATJ-209ENST00000488913 POTEDQ86YR6 584 aa24.76■■□□□ 1.55
PATJ-209ENST00000488913 MAPK8IP2Q13387 824 aaPredicted RBP23.95■■□□□ 1.42
PATJ-209ENST00000488913 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
PATJ-209ENST00000488913 DMRT2Q9Y5R5 561 aa23.64■■□□□ 1.37
PATJ-209ENST00000488913 PPP4R3CPQ6ZMV5 832 aa23.63■■□□□ 1.37
PATJ-209ENST00000488913 CNKSR2Q8WXI2 1034 aa23.1■■□□□ 1.29
PATJ-209ENST00000488913 HOXD11P31277 338 aaPredicted RBP22.87■■□□□ 1.25
PATJ-209ENST00000488913 DCAF8L1A6NGE4 600 aa22.82■■□□□ 1.24
PATJ-209ENST00000488913 NCBP3Q53F19 620 aaKnown RBP22.8■■□□□ 1.24
PATJ-209ENST00000488913 RNF216Q9NWF9 866 aaPredicted RBP22.8■■□□□ 1.24
PATJ-209ENST00000488913 NPM3O75607 178 aaKnown RBP22.46■■□□□ 1.19
PATJ-209ENST00000488913 KCNA4P22459 653 aa22.31■■□□□ 1.16
PATJ-209ENST00000488913 CACNB1Q02641 598 aaPredicted RBP22.07■■□□□ 1.12
PATJ-209ENST00000488913 RNF39Q9H2S5 420 aa22.06■■□□□ 1.12
PATJ-209ENST00000488913 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
PATJ-209ENST00000488913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.9■■□□□ 1.1
PATJ-209ENST00000488913 C1QBPQ07021 282 aaKnown RBP21.75■■□□□ 1.07
PATJ-209ENST00000488913 U3KPZ7 1027 aaPredicted RBP21.41■■□□□ 1.02
PATJ-209ENST00000488913 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
PATJ-209ENST00000488913 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
PATJ-209ENST00000488913 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
PATJ-209ENST00000488913 CAPN15O75808 1086 aa21.04■□□□□ 0.96
PATJ-209ENST00000488913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
PATJ-209ENST00000488913 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
PATJ-209ENST00000488913 APLP2Q06481 763 aa20.83■□□□□ 0.93
PATJ-209ENST00000488913 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
PATJ-209ENST00000488913 DSG3P32926 999 aa20.78■□□□□ 0.92
PATJ-209ENST00000488913 SAMD1Q6SPF0 538 aaPredicted RBP20.78■□□□□ 0.92
PATJ-209ENST00000488913 MYCNP04198 464 aaPredicted RBP20.76■□□□□ 0.91
PATJ-209ENST00000488913 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.9
PATJ-209ENST00000488913 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
PATJ-209ENST00000488913 ABCB7O75027 752 aa20.58■□□□□ 0.89
PATJ-209ENST00000488913 ZBTB22O15209 634 aa20.49■□□□□ 0.87
PATJ-209ENST00000488913 ATF5Q9Y2D1 282 aaPredicted RBP20.3■□□□□ 0.84
PATJ-209ENST00000488913 POLA2Q14181 598 aa20.26■□□□□ 0.83
PATJ-209ENST00000488913 ATXN8OSP0DMR3 200 aa19.99■□□□□ 0.79
PATJ-209ENST00000488913 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
PATJ-209ENST00000488913 EHMT2Q96KQ7 1210 aa19.8■□□□□ 0.76
PATJ-209ENST00000488913 RBM42Q9BTD8 480 aaKnown RBP19.8■□□□□ 0.76
PATJ-209ENST00000488913 ZBTB12Q9Y330 459 aaPredicted RBP19.79■□□□□ 0.76
PATJ-209ENST00000488913 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
PATJ-209ENST00000488913 FBLN2P98095 1184 aa19.49■□□□□ 0.71
PATJ-209ENST00000488913 POTEHQ6S545 545 aa19.47■□□□□ 0.71
PATJ-209ENST00000488913 AKT1S1Q96B36 256 aa19.42■□□□□ 0.7
PATJ-209ENST00000488913 MKRN4PQ13434 485 aaPredicted RBP19.35■□□□□ 0.69
PATJ-209ENST00000488913 CHRDL2Q6WN34 429 aa19.28■□□□□ 0.68
PATJ-209ENST00000488913 REM2Q8IYK8 340 aaPredicted RBP19.26■□□□□ 0.67
PATJ-209ENST00000488913 SPDYE2BA6NHP3 402 aa19.22■□□□□ 0.67
PATJ-209ENST00000488913 SPDYE6P0CI01 402 aa19.22■□□□□ 0.67
PATJ-209ENST00000488913 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
PATJ-209ENST00000488913 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
PATJ-209ENST00000488913 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
PATJ-209ENST00000488913 SSUH2Q9Y2M2 353 aa18.96■□□□□ 0.63
PATJ-209ENST00000488913 PIP4P2Q8N4L2 257 aa18.89■□□□□ 0.61
PATJ-209ENST00000488913 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
PATJ-209ENST00000488913 SPDYE1Q8NFV5 336 aaPredicted RBP18.84■□□□□ 0.61
PATJ-209ENST00000488913 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
PATJ-209ENST00000488913 FXR2P51116 673 aaKnown RBP eCLIP18.79■□□□□ 0.6
PATJ-209ENST00000488913 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
PATJ-209ENST00000488913 PRKAR2AP13861 404 aaKnown RBP18.59■□□□□ 0.57
PATJ-209ENST00000488913 PRR29P0C7W0 189 aa18.58■□□□□ 0.56
PATJ-209ENST00000488913 HAX1O00165 279 aa18.54■□□□□ 0.56
PATJ-209ENST00000488913 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
PATJ-209ENST00000488913 SP7Q8TDD2 431 aaPredicted RBP18.37■□□□□ 0.53
PATJ-209ENST00000488913 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.52
PATJ-209ENST00000488913 EVX2Q03828 476 aa18.29■□□□□ 0.52
PATJ-209ENST00000488913 C19orf67A6NJJ6 358 aa18.18■□□□□ 0.5
PATJ-209ENST00000488913 FARP1Q9Y4F1 1045 aaPredicted RBP18.18■□□□□ 0.5
PATJ-209ENST00000488913 CREBZFQ9NS37 354 aa18.13■□□□□ 0.49
PATJ-209ENST00000488913 PROM2Q8N271 834 aa18.09■□□□□ 0.49
PATJ-209ENST00000488913 CD44P16070 742 aaKnown RBP18.01■□□□□ 0.47
PATJ-209ENST00000488913 FKBP8Q14318 412 aa18.01■□□□□ 0.47
PATJ-209ENST00000488913 GABBR2O75899 941 aa17.89■□□□□ 0.45
PATJ-209ENST00000488913 NPM1P06748 294 aaKnown RBP eCLIP17.83■□□□□ 0.44
PATJ-209ENST00000488913 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.44
PATJ-209ENST00000488913 MNX1P50219 401 aaPredicted RBP17.81■□□□□ 0.44
PATJ-209ENST00000488913 MIER1Q8N108 512 aa17.78■□□□□ 0.44
PATJ-209ENST00000488913 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
PATJ-209ENST00000488913 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
PATJ-209ENST00000488913 ZNF579Q8NAF0 562 aaKnown RBP17.68■□□□□ 0.42
PATJ-209ENST00000488913 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
PATJ-209ENST00000488913 CLCN6P51797 869 aa17.62■□□□□ 0.41
PATJ-209ENST00000488913 PHF12Q96QT6 1004 aa17.59■□□□□ 0.41
PATJ-209ENST00000488913 TSPYL2Q9H2G4 693 aaPredicted RBP17.58■□□□□ 0.4
PATJ-209ENST00000488913 GALR2O43603 387 aaPredicted RBP17.51■□□□□ 0.39
PATJ-209ENST00000488913 DCBLD2Q96PD2 775 aa17.5■□□□□ 0.39
PATJ-209ENST00000488913 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
PATJ-209ENST00000488913 POTEIP0CG38 1075 aa17.49■□□□□ 0.39
PATJ-209ENST00000488913 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
PATJ-209ENST00000488913 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms