RNA–Protein interactions for RNA: ENST00000488866.1

PPM1B-211, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 3

Gene PPM1B, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-211ENST00000488866 AEBP2Q6ZN18 517 aaPredicted RBP40■■■■□ 3.99
PPM1B-211ENST00000488866 CHIC1Q5VXU3 224 aa37.82■■■■□ 3.64
PPM1B-211ENST00000488866 SENP3Q9H4L4 574 aaPredicted RBP33.95■■■■□ 3.03
PPM1B-211ENST00000488866 PHF23Q9BUL5 403 aaPredicted RBP33.58■■■□□ 2.97
PPM1B-211ENST00000488866 FOXD1Q16676 465 aa31.76■■■□□ 2.67
PPM1B-211ENST00000488866 PLPPR3Q6T4P5 718 aa30.12■■■□□ 2.41
PPM1B-211ENST00000488866 PPP6R1Q9UPN7 881 aa29.72■■■□□ 2.35
PPM1B-211ENST00000488866 MSH5O43196 834 aa29.61■■■□□ 2.33
PPM1B-211ENST00000488866 PIAS4Q8N2W9 510 aaPredicted RBP29.6■■■□□ 2.33
PPM1B-211ENST00000488866 ADRA2BP18089 450 aa29.58■■■□□ 2.33
PPM1B-211ENST00000488866 POTEDQ86YR6 584 aa29.13■■■□□ 2.25
PPM1B-211ENST00000488866 MAPK8IP2Q13387 824 aaPredicted RBP27.23■■□□□ 1.95
PPM1B-211ENST00000488866 DMRT2Q9Y5R5 561 aa26.96■■□□□ 1.91
PPM1B-211ENST00000488866 SCAF1Q9H7N4 1312 aaKnown RBP26.87■■□□□ 1.89
PPM1B-211ENST00000488866 PPP4R3CPQ6ZMV5 832 aa26.45■■□□□ 1.82
PPM1B-211ENST00000488866 HOXD11P31277 338 aaPredicted RBP25.95■■□□□ 1.74
PPM1B-211ENST00000488866 CNKSR2Q8WXI2 1034 aa25.92■■□□□ 1.74
PPM1B-211ENST00000488866 DCAF8L1A6NGE4 600 aa25.83■■□□□ 1.73
PPM1B-211ENST00000488866 RNF216Q9NWF9 866 aaPredicted RBP25.7■■□□□ 1.7
PPM1B-211ENST00000488866 CACNB1Q02641 598 aaPredicted RBP25.48■■□□□ 1.67
PPM1B-211ENST00000488866 RNF39Q9H2S5 420 aa25.35■■□□□ 1.65
PPM1B-211ENST00000488866 NCBP3Q53F19 620 aaKnown RBP25.3■■□□□ 1.64
PPM1B-211ENST00000488866 NPM3O75607 178 aaKnown RBP25.08■■□□□ 1.61
PPM1B-211ENST00000488866 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
PPM1B-211ENST00000488866 C1QBPQ07021 282 aaKnown RBP24.9■■□□□ 1.58
PPM1B-211ENST00000488866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.68■■□□□ 1.54
PPM1B-211ENST00000488866 KCNA4P22459 653 aa24.58■■□□□ 1.53
PPM1B-211ENST00000488866 U3KPZ7 1027 aaPredicted RBP24.24■■□□□ 1.47
PPM1B-211ENST00000488866 SLC4A2P04920 1241 aa24.02■■□□□ 1.44
PPM1B-211ENST00000488866 SPINK5Q9NQ38 1064 aaPredicted RBP23.94■■□□□ 1.42
PPM1B-211ENST00000488866 CAPN15O75808 1086 aa23.8■■□□□ 1.4
PPM1B-211ENST00000488866 DSG3P32926 999 aa23.73■■□□□ 1.39
PPM1B-211ENST00000488866 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
PPM1B-211ENST00000488866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.34■■□□□ 1.33
PPM1B-211ENST00000488866 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
PPM1B-211ENST00000488866 APLP2Q06481 763 aa23.33■■□□□ 1.33
PPM1B-211ENST00000488866 ABCB7O75027 752 aa23.32■■□□□ 1.32
PPM1B-211ENST00000488866 ZNF219Q9P2Y4 722 aaPredicted RBP23.31■■□□□ 1.32
PPM1B-211ENST00000488866 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
PPM1B-211ENST00000488866 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
PPM1B-211ENST00000488866 MYCNP04198 464 aaPredicted RBP23.11■■□□□ 1.29
PPM1B-211ENST00000488866 FOXD4L1Q9NU39 408 aa22.87■■□□□ 1.25
PPM1B-211ENST00000488866 POLA2Q14181 598 aa22.79■■□□□ 1.24
PPM1B-211ENST00000488866 POTEHQ6S545 545 aa22.78■■□□□ 1.24
PPM1B-211ENST00000488866 ATF5Q9Y2D1 282 aaPredicted RBP22.75■■□□□ 1.23
PPM1B-211ENST00000488866 ZBTB22O15209 634 aa22.67■■□□□ 1.22
PPM1B-211ENST00000488866 RBM42Q9BTD8 480 aaKnown RBP22.5■■□□□ 1.19
PPM1B-211ENST00000488866 ZBTB12Q9Y330 459 aaPredicted RBP22.19■■□□□ 1.14
PPM1B-211ENST00000488866 CHRDL2Q6WN34 429 aa22.13■■□□□ 1.13
PPM1B-211ENST00000488866 ATXN8OSP0DMR3 200 aa22.12■■□□□ 1.13
PPM1B-211ENST00000488866 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
PPM1B-211ENST00000488866 AKT1S1Q96B36 256 aa22.04■■□□□ 1.12
PPM1B-211ENST00000488866 REM2Q8IYK8 340 aaPredicted RBP21.88■■□□□ 1.09
PPM1B-211ENST00000488866 PITPNM1O00562 1244 aa21.68■■□□□ 1.06
PPM1B-211ENST00000488866 MKRN4PQ13434 485 aaPredicted RBP21.68■■□□□ 1.06
PPM1B-211ENST00000488866 FBLN2P98095 1184 aa21.66■■□□□ 1.06
PPM1B-211ENST00000488866 PIP4P2Q8N4L2 257 aa21.63■■□□□ 1.05
PPM1B-211ENST00000488866 SPDYE2BA6NHP3 402 aa21.57■■□□□ 1.04
PPM1B-211ENST00000488866 SPDYE6P0CI01 402 aa21.57■■□□□ 1.04
PPM1B-211ENST00000488866 SPDYE2Q495Y8 402 aa21.57■■□□□ 1.04
PPM1B-211ENST00000488866 CSRNP3Q8WYN3 585 aa21.51■■□□□ 1.03
PPM1B-211ENST00000488866 FXR2P51116 673 aaKnown RBP eCLIP21.48■■□□□ 1.03
PPM1B-211ENST00000488866 SSUH2Q9Y2M2 353 aa21.35■■□□□ 1.01
PPM1B-211ENST00000488866 ZNF692Q9BU19 519 aaPredicted RBP21.32■■□□□ 1
PPM1B-211ENST00000488866 SP7Q8TDD2 431 aaPredicted RBP21.31■■□□□ 1
PPM1B-211ENST00000488866 CLEC11AQ9Y240 323 aa21.21■□□□□ 0.99
PPM1B-211ENST00000488866 HAX1O00165 279 aa21.19■□□□□ 0.98
PPM1B-211ENST00000488866 SPDYE1Q8NFV5 336 aaPredicted RBP21.19■□□□□ 0.98
PPM1B-211ENST00000488866 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
PPM1B-211ENST00000488866 PRKAR2AP13861 404 aaKnown RBP21.08■□□□□ 0.97
PPM1B-211ENST00000488866 EVX2Q03828 476 aa21.08■□□□□ 0.97
PPM1B-211ENST00000488866 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
PPM1B-211ENST00000488866 CHADLQ6NUI6 762 aa20.9■□□□□ 0.94
PPM1B-211ENST00000488866 PRR29P0C7W0 189 aa20.82■□□□□ 0.92
PPM1B-211ENST00000488866 C19orf67A6NJJ6 358 aa20.8■□□□□ 0.92
PPM1B-211ENST00000488866 SPDYE4A6NLX3 237 aa20.52■□□□□ 0.88
PPM1B-211ENST00000488866 FARP1Q9Y4F1 1045 aaPredicted RBP20.52■□□□□ 0.88
PPM1B-211ENST00000488866 GABBR2O75899 941 aa20.51■□□□□ 0.87
PPM1B-211ENST00000488866 CD44P16070 742 aaKnown RBP20.4■□□□□ 0.86
PPM1B-211ENST00000488866 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
PPM1B-211ENST00000488866 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
PPM1B-211ENST00000488866 POTEIP0CG38 1075 aa20.15■□□□□ 0.82
PPM1B-211ENST00000488866 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
PPM1B-211ENST00000488866 ZNF579Q8NAF0 562 aaKnown RBP20.08■□□□□ 0.81
PPM1B-211ENST00000488866 PROM2Q8N271 834 aa20.07■□□□□ 0.8
PPM1B-211ENST00000488866 MNX1P50219 401 aaPredicted RBP20.06■□□□□ 0.8
PPM1B-211ENST00000488866 CLCN6P51797 869 aa19.99■□□□□ 0.79
PPM1B-211ENST00000488866 LHX8Q68G74 356 aa19.99■□□□□ 0.79
PPM1B-211ENST00000488866 GALR2O43603 387 aaPredicted RBP19.9■□□□□ 0.78
PPM1B-211ENST00000488866 PHF12Q96QT6 1004 aa19.88■□□□□ 0.77
PPM1B-211ENST00000488866 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
PPM1B-211ENST00000488866 DCBLD2Q96PD2 775 aa19.86■□□□□ 0.77
PPM1B-211ENST00000488866 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
PPM1B-211ENST00000488866 TSPYL2Q9H2G4 693 aaPredicted RBP19.61■□□□□ 0.73
PPM1B-211ENST00000488866 MS4A3Q96HJ5 214 aa19.6■□□□□ 0.73
PPM1B-211ENST00000488866 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
PPM1B-211ENST00000488866 MIER1Q8N108 512 aa19.56■□□□□ 0.72
PPM1B-211ENST00000488866 CCDC61Q9Y6R9 512 aa19.54■□□□□ 0.72
PPM1B-211ENST00000488866 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
PPM1B-211ENST00000488866 FKBP8Q14318 412 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms