RNA–Protein interactions for RNA: ENST00000488772.1

VEPH1-215, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 3

Gene VEPH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-215ENST00000488772 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
VEPH1-215ENST00000488772 CHIC1Q5VXU3 224 aa23.44■■□□□ 1.34
VEPH1-215ENST00000488772 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
VEPH1-215ENST00000488772 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
VEPH1-215ENST00000488772 FOXD1Q16676 465 aa19.01■□□□□ 0.63
VEPH1-215ENST00000488772 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
VEPH1-215ENST00000488772 PPP6R1Q9UPN7 881 aa18.3■□□□□ 0.52
VEPH1-215ENST00000488772 ADRA2BP18089 450 aa18.25■□□□□ 0.51
VEPH1-215ENST00000488772 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
VEPH1-215ENST00000488772 MSH5O43196 834 aa17.45■□□□□ 0.38
VEPH1-215ENST00000488772 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
VEPH1-215ENST00000488772 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
VEPH1-215ENST00000488772 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
VEPH1-215ENST00000488772 KCNA4P22459 653 aa16.43■□□□□ 0.22
VEPH1-215ENST00000488772 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
VEPH1-215ENST00000488772 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
VEPH1-215ENST00000488772 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
VEPH1-215ENST00000488772 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
VEPH1-215ENST00000488772 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
VEPH1-215ENST00000488772 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
VEPH1-215ENST00000488772 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
VEPH1-215ENST00000488772 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
VEPH1-215ENST00000488772 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
VEPH1-215ENST00000488772 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
VEPH1-215ENST00000488772 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
VEPH1-215ENST00000488772 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
VEPH1-215ENST00000488772 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
VEPH1-215ENST00000488772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
VEPH1-215ENST00000488772 ZBTB22O15209 634 aa15.14■□□□□ 0.01
VEPH1-215ENST00000488772 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
VEPH1-215ENST00000488772 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
VEPH1-215ENST00000488772 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
VEPH1-215ENST00000488772 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
VEPH1-215ENST00000488772 C1QBPQ07021 282 aaKnown RBP14.77□□□□□ -0.05
VEPH1-215ENST00000488772 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
VEPH1-215ENST00000488772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
VEPH1-215ENST00000488772 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
VEPH1-215ENST00000488772 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
VEPH1-215ENST00000488772 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
VEPH1-215ENST00000488772 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
VEPH1-215ENST00000488772 CAPN15O75808 1086 aa14.47□□□□□ -0.09
VEPH1-215ENST00000488772 APLP2Q06481 763 aa14.44□□□□□ -0.1
VEPH1-215ENST00000488772 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
VEPH1-215ENST00000488772 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
VEPH1-215ENST00000488772 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
VEPH1-215ENST00000488772 DSG3P32926 999 aa14.28□□□□□ -0.12
VEPH1-215ENST00000488772 ABCB7O75027 752 aa14.23□□□□□ -0.13
VEPH1-215ENST00000488772 POLA2Q14181 598 aa14.17□□□□□ -0.14
VEPH1-215ENST00000488772 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
VEPH1-215ENST00000488772 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
VEPH1-215ENST00000488772 FKBP8Q14318 412 aa14.11□□□□□ -0.15
VEPH1-215ENST00000488772 SLC24A1O60721 1099 aa13.99□□□□□ -0.17
VEPH1-215ENST00000488772 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
VEPH1-215ENST00000488772 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
VEPH1-215ENST00000488772 FBLN2P98095 1184 aa13.76□□□□□ -0.21
VEPH1-215ENST00000488772 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
VEPH1-215ENST00000488772 RBM42Q9BTD8 480 aaKnown RBP13.5□□□□□ -0.25
VEPH1-215ENST00000488772 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
VEPH1-215ENST00000488772 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
VEPH1-215ENST00000488772 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
VEPH1-215ENST00000488772 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
VEPH1-215ENST00000488772 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
VEPH1-215ENST00000488772 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
VEPH1-215ENST00000488772 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
VEPH1-215ENST00000488772 AKT1S1Q96B36 256 aa13.36□□□□□ -0.27
VEPH1-215ENST00000488772 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
VEPH1-215ENST00000488772 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
VEPH1-215ENST00000488772 PROM2Q8N271 834 aa13.28□□□□□ -0.28
VEPH1-215ENST00000488772 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
VEPH1-215ENST00000488772 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
VEPH1-215ENST00000488772 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
VEPH1-215ENST00000488772 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.32
VEPH1-215ENST00000488772 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
VEPH1-215ENST00000488772 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
VEPH1-215ENST00000488772 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
VEPH1-215ENST00000488772 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
VEPH1-215ENST00000488772 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
VEPH1-215ENST00000488772 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
VEPH1-215ENST00000488772 PKD2Q13563 968 aa12.93□□□□□ -0.34
VEPH1-215ENST00000488772 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
VEPH1-215ENST00000488772 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
VEPH1-215ENST00000488772 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
VEPH1-215ENST00000488772 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
VEPH1-215ENST00000488772 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
VEPH1-215ENST00000488772 SPOCK2Q92563 424 aa12.8□□□□□ -0.36
VEPH1-215ENST00000488772 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
VEPH1-215ENST00000488772 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
VEPH1-215ENST00000488772 MIER1Q8N108 512 aa12.76□□□□□ -0.37
VEPH1-215ENST00000488772 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
VEPH1-215ENST00000488772 POTEHQ6S545 545 aa12.71□□□□□ -0.37
VEPH1-215ENST00000488772 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
VEPH1-215ENST00000488772 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
VEPH1-215ENST00000488772 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
VEPH1-215ENST00000488772 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
VEPH1-215ENST00000488772 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
VEPH1-215ENST00000488772 BCANQ96GW7 911 aa12.65□□□□□ -0.38
VEPH1-215ENST00000488772 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
VEPH1-215ENST00000488772 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
VEPH1-215ENST00000488772 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
VEPH1-215ENST00000488772 RGL2O15211 777 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms