RNA–Protein interactions for RNA: ENST00000488722.5

HP1BP3-213, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

TSL 5

Gene HP1BP3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-213ENST00000488722 AEBP2Q6ZN18 517 aaPredicted RBP31.36■■■□□ 2.61
HP1BP3-213ENST00000488722 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
HP1BP3-213ENST00000488722 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
HP1BP3-213ENST00000488722 SENP3Q9H4L4 574 aaPredicted RBP26.46■■□□□ 1.83
HP1BP3-213ENST00000488722 PLPPR3Q6T4P5 718 aa25.51■■□□□ 1.67
HP1BP3-213ENST00000488722 FOXD1Q16676 465 aa24.53■■□□□ 1.52
HP1BP3-213ENST00000488722 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
HP1BP3-213ENST00000488722 ADRA2BP18089 450 aa24.06■■□□□ 1.44
HP1BP3-213ENST00000488722 PIAS4Q8N2W9 510 aaPredicted RBP23.24■■□□□ 1.31
HP1BP3-213ENST00000488722 KCNA4P22459 653 aa22.71■■□□□ 1.23
HP1BP3-213ENST00000488722 PPP4R3CPQ6ZMV5 832 aa22.57■■□□□ 1.2
HP1BP3-213ENST00000488722 MSH5O43196 834 aa22.35■■□□□ 1.17
HP1BP3-213ENST00000488722 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
HP1BP3-213ENST00000488722 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
HP1BP3-213ENST00000488722 NPM3O75607 178 aaKnown RBP21.83■■□□□ 1.09
HP1BP3-213ENST00000488722 CNKSR2Q8WXI2 1034 aa21.8■■□□□ 1.08
HP1BP3-213ENST00000488722 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
HP1BP3-213ENST00000488722 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
HP1BP3-213ENST00000488722 MAPK8IP2Q13387 824 aaPredicted RBP21.67■■□□□ 1.06
HP1BP3-213ENST00000488722 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
HP1BP3-213ENST00000488722 RNF216Q9NWF9 866 aaPredicted RBP21.24■□□□□ 0.99
HP1BP3-213ENST00000488722 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
HP1BP3-213ENST00000488722 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
HP1BP3-213ENST00000488722 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
HP1BP3-213ENST00000488722 ZBTB22O15209 634 aa20.94■□□□□ 0.94
HP1BP3-213ENST00000488722 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
HP1BP3-213ENST00000488722 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
HP1BP3-213ENST00000488722 DCAF8L1A6NGE4 600 aa20.24■□□□□ 0.83
HP1BP3-213ENST00000488722 MYCNP04198 464 aaPredicted RBP20.13■□□□□ 0.81
HP1BP3-213ENST00000488722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.791e-6■■□□□ 12.2
HP1BP3-213ENST00000488722 ATXN8OSP0DMR3 200 aa19.93■□□□□ 0.78
HP1BP3-213ENST00000488722 U3KPZ7 1027 aaPredicted RBP19.78■□□□□ 0.76
HP1BP3-213ENST00000488722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
HP1BP3-213ENST00000488722 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
HP1BP3-213ENST00000488722 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
HP1BP3-213ENST00000488722 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
HP1BP3-213ENST00000488722 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
HP1BP3-213ENST00000488722 APLP2Q06481 763 aa19.3■□□□□ 0.68
HP1BP3-213ENST00000488722 RNF39Q9H2S5 420 aa19.24■□□□□ 0.67
HP1BP3-213ENST00000488722 ZNF219Q9P2Y4 722 aaPredicted RBP19.19■□□□□ 0.66
HP1BP3-213ENST00000488722 FKBP8Q14318 412 aa19.15■□□□□ 0.66
HP1BP3-213ENST00000488722 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
HP1BP3-213ENST00000488722 C1QBPQ07021 282 aaKnown RBP19.01■□□□□ 0.63
HP1BP3-213ENST00000488722 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
HP1BP3-213ENST00000488722 CAPN15O75808 1086 aa18.92■□□□□ 0.62
HP1BP3-213ENST00000488722 POLA2Q14181 598 aa18.8■□□□□ 0.6
HP1BP3-213ENST00000488722 MKRN4PQ13434 485 aaPredicted RBP18.78■□□□□ 0.6
HP1BP3-213ENST00000488722 FBLN2P98095 1184 aa18.67■□□□□ 0.58
HP1BP3-213ENST00000488722 ABCB7O75027 752 aa18.64■□□□□ 0.57
HP1BP3-213ENST00000488722 SPDYE4A6NLX3 237 aa18.58■□□□□ 0.56
HP1BP3-213ENST00000488722 DSG3P32926 999 aa18.5■□□□□ 0.55
HP1BP3-213ENST00000488722 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
HP1BP3-213ENST00000488722 RTN4Q9NQC3 1192 aaKnown RBP18.43■□□□□ 0.54
HP1BP3-213ENST00000488722 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
HP1BP3-213ENST00000488722 PROM2Q8N271 834 aa18.4■□□□□ 0.54
HP1BP3-213ENST00000488722 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
HP1BP3-213ENST00000488722 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
HP1BP3-213ENST00000488722 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
HP1BP3-213ENST00000488722 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
HP1BP3-213ENST00000488722 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
HP1BP3-213ENST00000488722 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
HP1BP3-213ENST00000488722 SPDYE2Q495Y8 402 aa18.07■□□□□ 0.48
HP1BP3-213ENST00000488722 VASPP50552 380 aaPredicted RBP18.05■□□□□ 0.48
HP1BP3-213ENST00000488722 SSUH2Q9Y2M2 353 aa18.02■□□□□ 0.48
HP1BP3-213ENST00000488722 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
HP1BP3-213ENST00000488722 IFNLR1Q8IU57 520 aaPredicted RBP17.87■□□□□ 0.45
HP1BP3-213ENST00000488722 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.44
HP1BP3-213ENST00000488722 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.4
HP1BP3-213ENST00000488722 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
HP1BP3-213ENST00000488722 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
HP1BP3-213ENST00000488722 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
HP1BP3-213ENST00000488722 MIER1Q8N108 512 aa17.54■□□□□ 0.4
HP1BP3-213ENST00000488722 SPOCK2Q92563 424 aa17.53■□□□□ 0.4
HP1BP3-213ENST00000488722 PKD2Q13563 968 aa17.5■□□□□ 0.39
HP1BP3-213ENST00000488722 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
HP1BP3-213ENST00000488722 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
HP1BP3-213ENST00000488722 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
HP1BP3-213ENST00000488722 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
HP1BP3-213ENST00000488722 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
HP1BP3-213ENST00000488722 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
HP1BP3-213ENST00000488722 ECM2O94769 699 aaPredicted RBP17.24■□□□□ 0.35
HP1BP3-213ENST00000488722 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
HP1BP3-213ENST00000488722 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
HP1BP3-213ENST00000488722 CREBZFQ9NS37 354 aa17.17■□□□□ 0.34
HP1BP3-213ENST00000488722 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
HP1BP3-213ENST00000488722 CIZ1Q9ULV3 898 aaPredicted RBP17.15■□□□□ 0.34
HP1BP3-213ENST00000488722 RGL2O15211 777 aa17.09■□□□□ 0.33
HP1BP3-213ENST00000488722 MNX1P50219 401 aaPredicted RBP17.08■□□□□ 0.32
HP1BP3-213ENST00000488722 NUBP1P53384 320 aa17.08■□□□□ 0.32
HP1BP3-213ENST00000488722 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
HP1BP3-213ENST00000488722 GSE1Q14687 1217 aa16.99■□□□□ 0.31
HP1BP3-213ENST00000488722 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
HP1BP3-213ENST00000488722 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
HP1BP3-213ENST00000488722 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
HP1BP3-213ENST00000488722 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
HP1BP3-213ENST00000488722 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
HP1BP3-213ENST00000488722 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
HP1BP3-213ENST00000488722 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
HP1BP3-213ENST00000488722 RNF25Q96BH1 459 aaPredicted RBP16.85■□□□□ 0.29
HP1BP3-213ENST00000488722 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms