RNA–Protein interactions for RNA: ENST00000488702.1

TRAF3IP3-216, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 5

Gene TRAF3IP3, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-216ENST00000488702 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
TRAF3IP3-216ENST00000488702 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
TRAF3IP3-216ENST00000488702 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
TRAF3IP3-216ENST00000488702 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
TRAF3IP3-216ENST00000488702 FOXD1Q16676 465 aa20.7■□□□□ 0.9
TRAF3IP3-216ENST00000488702 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
TRAF3IP3-216ENST00000488702 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
TRAF3IP3-216ENST00000488702 ADRA2BP18089 450 aa19.64■□□□□ 0.73
TRAF3IP3-216ENST00000488702 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
TRAF3IP3-216ENST00000488702 MSH5O43196 834 aa19.19■□□□□ 0.66
TRAF3IP3-216ENST00000488702 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
TRAF3IP3-216ENST00000488702 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
TRAF3IP3-216ENST00000488702 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
TRAF3IP3-216ENST00000488702 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
TRAF3IP3-216ENST00000488702 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
TRAF3IP3-216ENST00000488702 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
TRAF3IP3-216ENST00000488702 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
TRAF3IP3-216ENST00000488702 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP3-216ENST00000488702 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
TRAF3IP3-216ENST00000488702 KCNA4P22459 653 aa17.18■□□□□ 0.34
TRAF3IP3-216ENST00000488702 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
TRAF3IP3-216ENST00000488702 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
TRAF3IP3-216ENST00000488702 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
TRAF3IP3-216ENST00000488702 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
TRAF3IP3-216ENST00000488702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRAF3IP3-216ENST00000488702 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP3-216ENST00000488702 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
TRAF3IP3-216ENST00000488702 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
TRAF3IP3-216ENST00000488702 CACNB1Q02641 598 aaPredicted RBP16.17■□□□□ 0.18
TRAF3IP3-216ENST00000488702 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
TRAF3IP3-216ENST00000488702 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
TRAF3IP3-216ENST00000488702 ZBTB22O15209 634 aa15.82■□□□□ 0.12
TRAF3IP3-216ENST00000488702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
TRAF3IP3-216ENST00000488702 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
TRAF3IP3-216ENST00000488702 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
TRAF3IP3-216ENST00000488702 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
TRAF3IP3-216ENST00000488702 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
TRAF3IP3-216ENST00000488702 APLP2Q06481 763 aa15.69■□□□□ 0.1
TRAF3IP3-216ENST00000488702 CAPN15O75808 1086 aa15.68■□□□□ 0.1
TRAF3IP3-216ENST00000488702 DSG3P32926 999 aa15.54■□□□□ 0.08
TRAF3IP3-216ENST00000488702 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
TRAF3IP3-216ENST00000488702 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
TRAF3IP3-216ENST00000488702 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
TRAF3IP3-216ENST00000488702 EHMT2Q96KQ7 1210 aa15.46■□□□□ 0.07
TRAF3IP3-216ENST00000488702 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
TRAF3IP3-216ENST00000488702 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
TRAF3IP3-216ENST00000488702 ABCB7O75027 752 aa15.35■□□□□ 0.05
TRAF3IP3-216ENST00000488702 POLA2Q14181 598 aa15.24■□□□□ 0.03
TRAF3IP3-216ENST00000488702 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
TRAF3IP3-216ENST00000488702 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
TRAF3IP3-216ENST00000488702 FBLN2P98095 1184 aa14.76□□□□□ -0.05
TRAF3IP3-216ENST00000488702 MKRN4PQ13434 485 aaPredicted RBP14.75□□□□□ -0.05
TRAF3IP3-216ENST00000488702 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
TRAF3IP3-216ENST00000488702 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
TRAF3IP3-216ENST00000488702 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
TRAF3IP3-216ENST00000488702 SPDYE2Q495Y8 402 aa14.55□□□□□ -0.08
TRAF3IP3-216ENST00000488702 AKT1S1Q96B36 256 aa14.55□□□□□ -0.08
TRAF3IP3-216ENST00000488702 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
TRAF3IP3-216ENST00000488702 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
TRAF3IP3-216ENST00000488702 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
TRAF3IP3-216ENST00000488702 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
TRAF3IP3-216ENST00000488702 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
TRAF3IP3-216ENST00000488702 PITPNM1O00562 1244 aa14.24□□□□□ -0.13
TRAF3IP3-216ENST00000488702 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAF3IP3-216ENST00000488702 POTEHQ6S545 545 aa14.18□□□□□ -0.14
TRAF3IP3-216ENST00000488702 SPDYE1Q8NFV5 336 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP3-216ENST00000488702 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
TRAF3IP3-216ENST00000488702 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAF3IP3-216ENST00000488702 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
TRAF3IP3-216ENST00000488702 PROM2Q8N271 834 aa14.04□□□□□ -0.16
TRAF3IP3-216ENST00000488702 FKBP8Q14318 412 aa13.98□□□□□ -0.17
TRAF3IP3-216ENST00000488702 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
TRAF3IP3-216ENST00000488702 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
TRAF3IP3-216ENST00000488702 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP3-216ENST00000488702 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
TRAF3IP3-216ENST00000488702 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
TRAF3IP3-216ENST00000488702 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP3-216ENST00000488702 HAX1O00165 279 aa13.65□□□□□ -0.22
TRAF3IP3-216ENST00000488702 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
TRAF3IP3-216ENST00000488702 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
TRAF3IP3-216ENST00000488702 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
TRAF3IP3-216ENST00000488702 EVX2Q03828 476 aa13.56□□□□□ -0.24
TRAF3IP3-216ENST00000488702 MIER1Q8N108 512 aa13.53□□□□□ -0.24
TRAF3IP3-216ENST00000488702 SP7Q8TDD2 431 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP3-216ENST00000488702 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAF3IP3-216ENST00000488702 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
TRAF3IP3-216ENST00000488702 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
TRAF3IP3-216ENST00000488702 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
TRAF3IP3-216ENST00000488702 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
TRAF3IP3-216ENST00000488702 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
TRAF3IP3-216ENST00000488702 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
TRAF3IP3-216ENST00000488702 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
TRAF3IP3-216ENST00000488702 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
TRAF3IP3-216ENST00000488702 GABBR2O75899 941 aa13.27□□□□□ -0.29
TRAF3IP3-216ENST00000488702 NUBP1P53384 320 aa13.26□□□□□ -0.29
TRAF3IP3-216ENST00000488702 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
TRAF3IP3-216ENST00000488702 CLCN6P51797 869 aa13.23□□□□□ -0.29
TRAF3IP3-216ENST00000488702 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
TRAF3IP3-216ENST00000488702 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP3-216ENST00000488702 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms