RNA–Protein interactions for RNA: ENST00000488692.1

ARHGEF33-208, Transcript of Rho guanine nucleotide exchange factor 33, humanhuman

TSL 3

Gene ARHGEF33, Length 615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF33-208ENST00000488692 CHIC1Q5VXU3 224 aa23.05■■□□□ 1.28
ARHGEF33-208ENST00000488692 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
ARHGEF33-208ENST00000488692 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF33-208ENST00000488692 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
ARHGEF33-208ENST00000488692 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
ARHGEF33-208ENST00000488692 FOXD1Q16676 465 aa18.26■□□□□ 0.51
ARHGEF33-208ENST00000488692 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
ARHGEF33-208ENST00000488692 ADRA2BP18089 450 aa17.75■□□□□ 0.43
ARHGEF33-208ENST00000488692 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
ARHGEF33-208ENST00000488692 MSH5O43196 834 aa17.43■□□□□ 0.38
ARHGEF33-208ENST00000488692 KCNA4P22459 653 aa17.29■□□□□ 0.36
ARHGEF33-208ENST00000488692 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF33-208ENST00000488692 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
ARHGEF33-208ENST00000488692 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
ARHGEF33-208ENST00000488692 NCBP3Q53F19 620 aaKnown RBP16.74■□□□□ 0.27
ARHGEF33-208ENST00000488692 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
ARHGEF33-208ENST00000488692 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
ARHGEF33-208ENST00000488692 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
ARHGEF33-208ENST00000488692 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
ARHGEF33-208ENST00000488692 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
ARHGEF33-208ENST00000488692 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
ARHGEF33-208ENST00000488692 ZBTB22O15209 634 aa15.87■□□□□ 0.13
ARHGEF33-208ENST00000488692 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF33-208ENST00000488692 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF33-208ENST00000488692 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
ARHGEF33-208ENST00000488692 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
ARHGEF33-208ENST00000488692 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF33-208ENST00000488692 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
ARHGEF33-208ENST00000488692 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
ARHGEF33-208ENST00000488692 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
ARHGEF33-208ENST00000488692 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF33-208ENST00000488692 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF33-208ENST00000488692 FKBP8Q14318 412 aa14.84□□□□□ -0.03
ARHGEF33-208ENST00000488692 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
ARHGEF33-208ENST00000488692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF33-208ENST00000488692 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
ARHGEF33-208ENST00000488692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
ARHGEF33-208ENST00000488692 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
ARHGEF33-208ENST00000488692 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
ARHGEF33-208ENST00000488692 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF33-208ENST00000488692 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
ARHGEF33-208ENST00000488692 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF33-208ENST00000488692 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
ARHGEF33-208ENST00000488692 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF33-208ENST00000488692 APLP2Q06481 763 aa14.48□□□□□ -0.09
ARHGEF33-208ENST00000488692 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF33-208ENST00000488692 FBXO3Q9UK99 471 aa14.22□□□□□ -0.13
ARHGEF33-208ENST00000488692 SPDYE4A6NLX3 237 aa14.15□□□□□ -0.14
ARHGEF33-208ENST00000488692 FBLN2P98095 1184 aa14.09□□□□□ -0.15
ARHGEF33-208ENST00000488692 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
ARHGEF33-208ENST00000488692 PROM2Q8N271 834 aa14□□□□□ -0.17
ARHGEF33-208ENST00000488692 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF33-208ENST00000488692 POLA2Q14181 598 aa13.96□□□□□ -0.17
ARHGEF33-208ENST00000488692 POTEHQ6S545 545 aa13.93□□□□□ -0.18
ARHGEF33-208ENST00000488692 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF33-208ENST00000488692 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF33-208ENST00000488692 CAPN15O75808 1086 aa13.9□□□□□ -0.18
ARHGEF33-208ENST00000488692 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
ARHGEF33-208ENST00000488692 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF33-208ENST00000488692 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
ARHGEF33-208ENST00000488692 ABCB7O75027 752 aa13.64□□□□□ -0.23
ARHGEF33-208ENST00000488692 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
ARHGEF33-208ENST00000488692 DSG3P32926 999 aa13.61□□□□□ -0.23
ARHGEF33-208ENST00000488692 PKD2Q13563 968 aa13.58□□□□□ -0.24
ARHGEF33-208ENST00000488692 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
ARHGEF33-208ENST00000488692 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF33-208ENST00000488692 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
ARHGEF33-208ENST00000488692 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
ARHGEF33-208ENST00000488692 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
ARHGEF33-208ENST00000488692 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
ARHGEF33-208ENST00000488692 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
ARHGEF33-208ENST00000488692 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF33-208ENST00000488692 PLCD3Q8N3E9 789 aa13.43□□□□□ -0.26
ARHGEF33-208ENST00000488692 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
ARHGEF33-208ENST00000488692 ECM2O94769 699 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF33-208ENST00000488692 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
ARHGEF33-208ENST00000488692 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF33-208ENST00000488692 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
ARHGEF33-208ENST00000488692 MIER1Q8N108 512 aa13.37□□□□□ -0.27
ARHGEF33-208ENST00000488692 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
ARHGEF33-208ENST00000488692 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF33-208ENST00000488692 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
ARHGEF33-208ENST00000488692 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF33-208ENST00000488692 BCANQ96GW7 911 aa13.29□□□□□ -0.28
ARHGEF33-208ENST00000488692 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF33-208ENST00000488692 RGL2O15211 777 aa13.19□□□□□ -0.3
ARHGEF33-208ENST00000488692 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
ARHGEF33-208ENST00000488692 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF33-208ENST00000488692 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
ARHGEF33-208ENST00000488692 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
ARHGEF33-208ENST00000488692 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
ARHGEF33-208ENST00000488692 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
ARHGEF33-208ENST00000488692 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
ARHGEF33-208ENST00000488692 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
ARHGEF33-208ENST00000488692 GSE1Q14687 1217 aa13.03□□□□□ -0.32
ARHGEF33-208ENST00000488692 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
ARHGEF33-208ENST00000488692 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
ARHGEF33-208ENST00000488692 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
ARHGEF33-208ENST00000488692 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
ARHGEF33-208ENST00000488692 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms