RNA–Protein interactions for RNA: ENST00000488680.1

GRAMD1C-213, Transcript of GRAM domain containing 1C, humanhuman

TSL 4

Gene GRAMD1C, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1C-213ENST00000488680 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
GRAMD1C-213ENST00000488680 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
GRAMD1C-213ENST00000488680 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
GRAMD1C-213ENST00000488680 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
GRAMD1C-213ENST00000488680 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
GRAMD1C-213ENST00000488680 FOXD1Q16676 465 aa16.26■□□□□ 0.19
GRAMD1C-213ENST00000488680 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
GRAMD1C-213ENST00000488680 ADRA2BP18089 450 aa15.78■□□□□ 0.12
GRAMD1C-213ENST00000488680 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
GRAMD1C-213ENST00000488680 POTEDQ86YR6 584 aa15.08■□□□□ 0
GRAMD1C-213ENST00000488680 MSH5O43196 834 aa14.93□□□□□ -0.02
GRAMD1C-213ENST00000488680 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
GRAMD1C-213ENST00000488680 KCNA4P22459 653 aa14.54□□□□□ -0.08
GRAMD1C-213ENST00000488680 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
GRAMD1C-213ENST00000488680 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
GRAMD1C-213ENST00000488680 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
GRAMD1C-213ENST00000488680 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
GRAMD1C-213ENST00000488680 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
GRAMD1C-213ENST00000488680 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
GRAMD1C-213ENST00000488680 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
GRAMD1C-213ENST00000488680 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
GRAMD1C-213ENST00000488680 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
GRAMD1C-213ENST00000488680 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
GRAMD1C-213ENST00000488680 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
GRAMD1C-213ENST00000488680 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
GRAMD1C-213ENST00000488680 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
GRAMD1C-213ENST00000488680 ZBTB22O15209 634 aa13.4□□□□□ -0.26
GRAMD1C-213ENST00000488680 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
GRAMD1C-213ENST00000488680 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
GRAMD1C-213ENST00000488680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.3
GRAMD1C-213ENST00000488680 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
GRAMD1C-213ENST00000488680 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
GRAMD1C-213ENST00000488680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
GRAMD1C-213ENST00000488680 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
GRAMD1C-213ENST00000488680 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
GRAMD1C-213ENST00000488680 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
GRAMD1C-213ENST00000488680 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
GRAMD1C-213ENST00000488680 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
GRAMD1C-213ENST00000488680 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
GRAMD1C-213ENST00000488680 APLP2Q06481 763 aa12.69□□□□□ -0.38
GRAMD1C-213ENST00000488680 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
GRAMD1C-213ENST00000488680 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
GRAMD1C-213ENST00000488680 CAPN15O75808 1086 aa12.49□□□□□ -0.41
GRAMD1C-213ENST00000488680 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
GRAMD1C-213ENST00000488680 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
GRAMD1C-213ENST00000488680 POLA2Q14181 598 aa12.31□□□□□ -0.44
GRAMD1C-213ENST00000488680 ABCB7O75027 752 aa12.27□□□□□ -0.45
GRAMD1C-213ENST00000488680 DSG3P32926 999 aa12.25□□□□□ -0.45
GRAMD1C-213ENST00000488680 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
GRAMD1C-213ENST00000488680 FBLN2P98095 1184 aa12.15□□□□□ -0.46
GRAMD1C-213ENST00000488680 FKBP8Q14318 412 aa12.14□□□□□ -0.47
GRAMD1C-213ENST00000488680 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
GRAMD1C-213ENST00000488680 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
GRAMD1C-213ENST00000488680 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
GRAMD1C-213ENST00000488680 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
GRAMD1C-213ENST00000488680 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
GRAMD1C-213ENST00000488680 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
GRAMD1C-213ENST00000488680 PROM2Q8N271 834 aa11.82□□□□□ -0.52
GRAMD1C-213ENST00000488680 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
GRAMD1C-213ENST00000488680 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
GRAMD1C-213ENST00000488680 POTEHQ6S545 545 aa11.69□□□□□ -0.54
GRAMD1C-213ENST00000488680 RBM42Q9BTD8 480 aaKnown RBP11.67□□□□□ -0.54
GRAMD1C-213ENST00000488680 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
GRAMD1C-213ENST00000488680 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
GRAMD1C-213ENST00000488680 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
GRAMD1C-213ENST00000488680 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
GRAMD1C-213ENST00000488680 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
GRAMD1C-213ENST00000488680 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
GRAMD1C-213ENST00000488680 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
GRAMD1C-213ENST00000488680 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
GRAMD1C-213ENST00000488680 IFNLR1Q8IU57 520 aaPredicted RBP11.36□□□□□ -0.59
GRAMD1C-213ENST00000488680 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
GRAMD1C-213ENST00000488680 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
GRAMD1C-213ENST00000488680 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
GRAMD1C-213ENST00000488680 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
GRAMD1C-213ENST00000488680 MIER1Q8N108 512 aa11.31□□□□□ -0.6
GRAMD1C-213ENST00000488680 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
GRAMD1C-213ENST00000488680 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
GRAMD1C-213ENST00000488680 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
GRAMD1C-213ENST00000488680 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
GRAMD1C-213ENST00000488680 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
GRAMD1C-213ENST00000488680 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
GRAMD1C-213ENST00000488680 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
GRAMD1C-213ENST00000488680 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
GRAMD1C-213ENST00000488680 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
GRAMD1C-213ENST00000488680 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
GRAMD1C-213ENST00000488680 PKD2Q13563 968 aa11.05□□□□□ -0.64
GRAMD1C-213ENST00000488680 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
GRAMD1C-213ENST00000488680 NUBP1P53384 320 aa11.03□□□□□ -0.64
GRAMD1C-213ENST00000488680 PIP4P2Q8N4L2 257 aa11.02□□□□□ -0.65
GRAMD1C-213ENST00000488680 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
GRAMD1C-213ENST00000488680 FARP1Q9Y4F1 1045 aaPredicted RBP10.99□□□□□ -0.65
GRAMD1C-213ENST00000488680 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
GRAMD1C-213ENST00000488680 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
GRAMD1C-213ENST00000488680 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
GRAMD1C-213ENST00000488680 GSE1Q14687 1217 aa10.94□□□□□ -0.66
GRAMD1C-213ENST00000488680 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
GRAMD1C-213ENST00000488680 DCAF8Q5TAQ9 597 aa10.92□□□□□ -0.66
GRAMD1C-213ENST00000488680 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
GRAMD1C-213ENST00000488680 RGL2O15211 777 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms