RNA–Protein interactions for RNA: ENST00000488604.1

SRSF12-203, Transcript of serine and arginine rich splicing factor 12, humanhuman

TSL 2

Gene SRSF12, Length 693 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF12-203ENST00000488604 AEBP2Q6ZN18 517 aaPredicted RBP32.34■■■□□ 2.77
SRSF12-203ENST00000488604 CHIC1Q5VXU3 224 aa30.69■■■□□ 2.5
SRSF12-203ENST00000488604 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
SRSF12-203ENST00000488604 PHF23Q9BUL5 403 aaPredicted RBP27.21■■□□□ 1.95
SRSF12-203ENST00000488604 FOXD1Q16676 465 aa25.69■■□□□ 1.7
SRSF12-203ENST00000488604 PLPPR3Q6T4P5 718 aa24.53■■□□□ 1.52
SRSF12-203ENST00000488604 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
SRSF12-203ENST00000488604 ADRA2BP18089 450 aa24.02■■□□□ 1.44
SRSF12-203ENST00000488604 PIAS4Q8N2W9 510 aaPredicted RBP24.01■■□□□ 1.43
SRSF12-203ENST00000488604 MSH5O43196 834 aa23.95■■□□□ 1.42
SRSF12-203ENST00000488604 POTEDQ86YR6 584 aa23.38■■□□□ 1.33
SRSF12-203ENST00000488604 MAPK8IP2Q13387 824 aaPredicted RBP22.07■■□□□ 1.12
SRSF12-203ENST00000488604 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
SRSF12-203ENST00000488604 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
SRSF12-203ENST00000488604 PPP4R3CPQ6ZMV5 832 aa21.55■■□□□ 1.04
SRSF12-203ENST00000488604 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
SRSF12-203ENST00000488604 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
SRSF12-203ENST00000488604 HOXD11P31277 338 aaPredicted RBP21.03■□□□□ 0.96
SRSF12-203ENST00000488604 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
SRSF12-203ENST00000488604 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
SRSF12-203ENST00000488604 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
SRSF12-203ENST00000488604 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
SRSF12-203ENST00000488604 NPM3O75607 178 aaKnown RBP20.43■□□□□ 0.86
SRSF12-203ENST00000488604 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
SRSF12-203ENST00000488604 C1QBPQ07021 282 aaKnown RBP20.15■□□□□ 0.82
SRSF12-203ENST00000488604 KCNA4P22459 653 aa20.11■□□□□ 0.81
SRSF12-203ENST00000488604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.81
SRSF12-203ENST00000488604 U3KPZ7 1027 aaPredicted RBP19.66■□□□□ 0.74
SRSF12-203ENST00000488604 SLC4A2P04920 1241 aa19.51■□□□□ 0.71
SRSF12-203ENST00000488604 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
SRSF12-203ENST00000488604 CAPN15O75808 1086 aa19.36■□□□□ 0.69
SRSF12-203ENST00000488604 DSG3P32926 999 aa19.21■□□□□ 0.67
SRSF12-203ENST00000488604 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
SRSF12-203ENST00000488604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
SRSF12-203ENST00000488604 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
SRSF12-203ENST00000488604 APLP2Q06481 763 aa19.03■□□□□ 0.64
SRSF12-203ENST00000488604 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
SRSF12-203ENST00000488604 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
SRSF12-203ENST00000488604 ABCB7O75027 752 aa18.95■□□□□ 0.62
SRSF12-203ENST00000488604 ZNF219Q9P2Y4 722 aaPredicted RBP18.95■□□□□ 0.62
SRSF12-203ENST00000488604 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
SRSF12-203ENST00000488604 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
SRSF12-203ENST00000488604 POLA2Q14181 598 aa18.55■□□□□ 0.56
SRSF12-203ENST00000488604 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
SRSF12-203ENST00000488604 ZBTB22O15209 634 aa18.49■□□□□ 0.55
SRSF12-203ENST00000488604 POTEHQ6S545 545 aa18.32■□□□□ 0.52
SRSF12-203ENST00000488604 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
SRSF12-203ENST00000488604 ZBTB12Q9Y330 459 aaPredicted RBP18.08■□□□□ 0.48
SRSF12-203ENST00000488604 ATXN8OSP0DMR3 200 aa18.07■□□□□ 0.48
SRSF12-203ENST00000488604 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
SRSF12-203ENST00000488604 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
SRSF12-203ENST00000488604 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
SRSF12-203ENST00000488604 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
SRSF12-203ENST00000488604 FBLN2P98095 1184 aa17.71■□□□□ 0.43
SRSF12-203ENST00000488604 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
SRSF12-203ENST00000488604 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
SRSF12-203ENST00000488604 PITPNM1O00562 1244 aa17.57■□□□□ 0.4
SRSF12-203ENST00000488604 SPDYE2BA6NHP3 402 aa17.56■□□□□ 0.4
SRSF12-203ENST00000488604 SPDYE6P0CI01 402 aa17.56■□□□□ 0.4
SRSF12-203ENST00000488604 SPDYE2Q495Y8 402 aa17.56■□□□□ 0.4
SRSF12-203ENST00000488604 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
SRSF12-203ENST00000488604 PIP4P2Q8N4L2 257 aa17.5■□□□□ 0.39
SRSF12-203ENST00000488604 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
SRSF12-203ENST00000488604 FXR2P51116 673 aaKnown RBP eCLIP17.38■□□□□ 0.37
SRSF12-203ENST00000488604 SSUH2Q9Y2M2 353 aa17.33■□□□□ 0.36
SRSF12-203ENST00000488604 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
SRSF12-203ENST00000488604 SPDYE1Q8NFV5 336 aaPredicted RBP17.25■□□□□ 0.35
SRSF12-203ENST00000488604 HAX1O00165 279 aa17.2■□□□□ 0.34
SRSF12-203ENST00000488604 SP7Q8TDD2 431 aaPredicted RBP17.18■□□□□ 0.34
SRSF12-203ENST00000488604 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
SRSF12-203ENST00000488604 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
SRSF12-203ENST00000488604 EVX2Q03828 476 aa17.02■□□□□ 0.32
SRSF12-203ENST00000488604 PRR29P0C7W0 189 aa16.99■□□□□ 0.31
SRSF12-203ENST00000488604 CHADLQ6NUI6 762 aa16.99■□□□□ 0.31
SRSF12-203ENST00000488604 C19orf67A6NJJ6 358 aa16.82■□□□□ 0.28
SRSF12-203ENST00000488604 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
SRSF12-203ENST00000488604 FARP1Q9Y4F1 1045 aaPredicted RBP16.68■□□□□ 0.26
SRSF12-203ENST00000488604 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
SRSF12-203ENST00000488604 GABBR2O75899 941 aa16.59■□□□□ 0.25
SRSF12-203ENST00000488604 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
SRSF12-203ENST00000488604 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
SRSF12-203ENST00000488604 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
SRSF12-203ENST00000488604 PROM2Q8N271 834 aa16.34■□□□□ 0.21
SRSF12-203ENST00000488604 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
SRSF12-203ENST00000488604 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
SRSF12-203ENST00000488604 POTEIP0CG38 1075 aa16.26■□□□□ 0.19
SRSF12-203ENST00000488604 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
SRSF12-203ENST00000488604 CLCN6P51797 869 aa16.22■□□□□ 0.19
SRSF12-203ENST00000488604 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
SRSF12-203ENST00000488604 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
SRSF12-203ENST00000488604 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
SRSF12-203ENST00000488604 GALR2O43603 387 aaPredicted RBP16.14■□□□□ 0.17
SRSF12-203ENST00000488604 LHX8Q68G74 356 aa16.14■□□□□ 0.17
SRSF12-203ENST00000488604 MIER1Q8N108 512 aa16.06■□□□□ 0.16
SRSF12-203ENST00000488604 FKBP8Q14318 412 aa16.04■□□□□ 0.16
SRSF12-203ENST00000488604 TSPYL2Q9H2G4 693 aaPredicted RBP16.03■□□□□ 0.16
SRSF12-203ENST00000488604 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
SRSF12-203ENST00000488604 PLCD3Q8N3E9 789 aa15.92■□□□□ 0.14
SRSF12-203ENST00000488604 MS4A3Q96HJ5 214 aa15.92■□□□□ 0.14
SRSF12-203ENST00000488604 CCDC61Q9Y6R9 512 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms