RNA–Protein interactions for RNA: ENST00000488541.1

PRKCI-206, Transcript of protein kinase C iota, humanhuman

TSL 2

Gene PRKCI, Length 332 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-206ENST00000488541 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
PRKCI-206ENST00000488541 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
PRKCI-206ENST00000488541 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
PRKCI-206ENST00000488541 POTEDQ86YR6 584 aa15.2■□□□□ 0.02
PRKCI-206ENST00000488541 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
PRKCI-206ENST00000488541 FOXD1Q16676 465 aa14.45□□□□□ -0.1
PRKCI-206ENST00000488541 MSH5O43196 834 aa13.9□□□□□ -0.18
PRKCI-206ENST00000488541 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
PRKCI-206ENST00000488541 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
PRKCI-206ENST00000488541 ADRA2BP18089 450 aa12.69□□□□□ -0.38
PRKCI-206ENST00000488541 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
PRKCI-206ENST00000488541 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
PRKCI-206ENST00000488541 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
PRKCI-206ENST00000488541 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
PRKCI-206ENST00000488541 RNF39Q9H2S5 420 aa11.77□□□□□ -0.53
PRKCI-206ENST00000488541 POTEHQ6S545 545 aa11.73□□□□□ -0.53
PRKCI-206ENST00000488541 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
PRKCI-206ENST00000488541 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
PRKCI-206ENST00000488541 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
PRKCI-206ENST00000488541 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
PRKCI-206ENST00000488541 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
PRKCI-206ENST00000488541 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
PRKCI-206ENST00000488541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRKCI-206ENST00000488541 CNKSR2Q8WXI2 1034 aa10.72□□□□□ -0.69
PRKCI-206ENST00000488541 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.69
PRKCI-206ENST00000488541 DSG3P32926 999 aa10.68□□□□□ -0.7
PRKCI-206ENST00000488541 CAPN15O75808 1086 aa10.57□□□□□ -0.72
PRKCI-206ENST00000488541 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
PRKCI-206ENST00000488541 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
PRKCI-206ENST00000488541 CHRDL2Q6WN34 429 aa10.42□□□□□ -0.74
PRKCI-206ENST00000488541 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
PRKCI-206ENST00000488541 ABCB7O75027 752 aa10.25□□□□□ -0.77
PRKCI-206ENST00000488541 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
PRKCI-206ENST00000488541 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
PRKCI-206ENST00000488541 PLSCR2Q9NRY7 297 aa10.13□□□□□ -0.79
PRKCI-206ENST00000488541 ZNF219Q9P2Y4 722 aaPredicted RBP10.09□□□□□ -0.79
PRKCI-206ENST00000488541 HAX1O00165 279 aa10.06□□□□□ -0.8
PRKCI-206ENST00000488541 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
PRKCI-206ENST00000488541 APLP2Q06481 763 aa9.98□□□□□ -0.81
PRKCI-206ENST00000488541 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
PRKCI-206ENST00000488541 LHX8Q68G74 356 aa9.88□□□□□ -0.83
PRKCI-206ENST00000488541 NPM3O75607 178 aaKnown RBP9.86□□□□□ -0.83
PRKCI-206ENST00000488541 EVX2Q03828 476 aa9.82□□□□□ -0.84
PRKCI-206ENST00000488541 AKT1S1Q96B36 256 aa9.78□□□□□ -0.84
PRKCI-206ENST00000488541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.73□□□□□ -0.85
PRKCI-206ENST00000488541 HNRNPUL2Q1KMD3 747 aaKnown RBP9.73□□□□□ -0.85
PRKCI-206ENST00000488541 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
PRKCI-206ENST00000488541 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
PRKCI-206ENST00000488541 SLC4A2P04920 1241 aa9.66□□□□□ -0.86
PRKCI-206ENST00000488541 POLA2Q14181 598 aa9.66□□□□□ -0.86
PRKCI-206ENST00000488541 PITPNM1O00562 1244 aa9.64□□□□□ -0.87
PRKCI-206ENST00000488541 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
PRKCI-206ENST00000488541 GABBR2O75899 941 aa9.55□□□□□ -0.88
PRKCI-206ENST00000488541 KCNA4P22459 653 aa9.45□□□□□ -0.9
PRKCI-206ENST00000488541 C19orf67A6NJJ6 358 aa9.44□□□□□ -0.9
PRKCI-206ENST00000488541 OSCARQ8IYS5 282 aa9.41□□□□□ -0.9
PRKCI-206ENST00000488541 PRKAR2AP13861 404 aaKnown RBP9.38□□□□□ -0.91
PRKCI-206ENST00000488541 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
PRKCI-206ENST00000488541 POTEMA6NI47 508 aa9.37□□□□□ -0.91
PRKCI-206ENST00000488541 POTEIP0CG38 1075 aa9.33□□□□□ -0.92
PRKCI-206ENST00000488541 POTEGQ6S5H5 508 aa9.31□□□□□ -0.92
PRKCI-206ENST00000488541 PCDH10Q9P2E7 1040 aa9.22□□□□□ -0.93
PRKCI-206ENST00000488541 OTUD5Q96G74 571 aa9.17□□□□□ -0.94
PRKCI-206ENST00000488541 CLEC11AQ9Y240 323 aa9.16□□□□□ -0.94
PRKCI-206ENST00000488541 MYCNP04198 464 aaPredicted RBP9.15□□□□□ -0.94
PRKCI-206ENST00000488541 NISCHQ9Y2I1 1504 aa9.12□□□□□ -0.95
PRKCI-206ENST00000488541 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
PRKCI-206ENST00000488541 SPDYE1Q8NFV5 336 aaPredicted RBP9.09□□□□□ -0.95
PRKCI-206ENST00000488541 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
PRKCI-206ENST00000488541 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
PRKCI-206ENST00000488541 CLCN6P51797 869 aa9.02□□□□□ -0.97
PRKCI-206ENST00000488541 ATF5Q9Y2D1 282 aaPredicted RBP9.02□□□□□ -0.97
PRKCI-206ENST00000488541 SPDYE2BA6NHP3 402 aa9□□□□□ -0.97
PRKCI-206ENST00000488541 POTEB2H3BUK9 544 aa9□□□□□ -0.97
PRKCI-206ENST00000488541 SPDYE6P0CI01 402 aa9□□□□□ -0.97
PRKCI-206ENST00000488541 SPDYE2Q495Y8 402 aa9□□□□□ -0.97
PRKCI-206ENST00000488541 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
PRKCI-206ENST00000488541 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
PRKCI-206ENST00000488541 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
PRKCI-206ENST00000488541 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
PRKCI-206ENST00000488541 ZNF579Q8NAF0 562 aaKnown RBP8.82□□□□□ -1
PRKCI-206ENST00000488541 FARP1Q9Y4F1 1045 aaPredicted RBP8.82□□□□□ -1
PRKCI-206ENST00000488541 GALR2O43603 387 aaPredicted RBP8.79□□□□□ -1
PRKCI-206ENST00000488541 FBLN2P98095 1184 aa8.76□□□□□ -1.01
PRKCI-206ENST00000488541 FOXD4L1Q9NU39 408 aa8.76□□□□□ -1.01
PRKCI-206ENST00000488541 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
PRKCI-206ENST00000488541 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
PRKCI-206ENST00000488541 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
PRKCI-206ENST00000488541 ZRANB1Q9UGI0 708 aa8.75□□□□□ -1.01
PRKCI-206ENST00000488541 ZBTB22O15209 634 aa8.73□□□□□ -1.01
PRKCI-206ENST00000488541 MAMSTRQ6ZN01 415 aa8.73□□□□□ -1.01
PRKCI-206ENST00000488541 POTEJP0CG39 1038 aa8.71□□□□□ -1.02
PRKCI-206ENST00000488541 PELP1Q8IZL8 1130 aaKnown RBP8.7□□□□□ -1.02
PRKCI-206ENST00000488541 METRNQ9UJH8 293 aa8.67□□□□□ -1.02
PRKCI-206ENST00000488541 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
PRKCI-206ENST00000488541 SCUBE2Q9NQ36 999 aa8.64□□□□□ -1.03
PRKCI-206ENST00000488541 PABPN1Q86U42 306 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRKCI-206ENST00000488541 C7P10643 843 aa8.59□□□□□ -1.03
PRKCI-206ENST00000488541 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
PRKCI-206ENST00000488541 SPNS2Q8IVW8 549 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms