RNA–Protein interactions for RNA: ENST00000488530.1

APPL1-206, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

TSL 3

Gene APPL1, Length 728 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-206ENST00000488530 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
APPL1-206ENST00000488530 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
APPL1-206ENST00000488530 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
APPL1-206ENST00000488530 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
APPL1-206ENST00000488530 FOXD1Q16676 465 aa16.47■□□□□ 0.23
APPL1-206ENST00000488530 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
APPL1-206ENST00000488530 MSH5O43196 834 aa15.56■□□□□ 0.08
APPL1-206ENST00000488530 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
APPL1-206ENST00000488530 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
APPL1-206ENST00000488530 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
APPL1-206ENST00000488530 ADRA2BP18089 450 aa15.23■□□□□ 0.03
APPL1-206ENST00000488530 SCAF1Q9H7N4 1312 aaKnown RBP14.09□□□□□ -0.15
APPL1-206ENST00000488530 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
APPL1-206ENST00000488530 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
APPL1-206ENST00000488530 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
APPL1-206ENST00000488530 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
APPL1-206ENST00000488530 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
APPL1-206ENST00000488530 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
APPL1-206ENST00000488530 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
APPL1-206ENST00000488530 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
APPL1-206ENST00000488530 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
APPL1-206ENST00000488530 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
APPL1-206ENST00000488530 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
APPL1-206ENST00000488530 C1QBPQ07021 282 aaKnown RBP13.07□□□□□ -0.32
APPL1-206ENST00000488530 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
APPL1-206ENST00000488530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
APPL1-206ENST00000488530 KCNA4P22459 653 aa12.52□□□□□ -0.41
APPL1-206ENST00000488530 U3KPZ7 1027 aaPredicted RBP12.52□□□□□ -0.41
APPL1-206ENST00000488530 CAPN15O75808 1086 aa12.36□□□□□ -0.43
APPL1-206ENST00000488530 DSG3P32926 999 aa12.33□□□□□ -0.44
APPL1-206ENST00000488530 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
APPL1-206ENST00000488530 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
APPL1-206ENST00000488530 APLP2Q06481 763 aa12.31□□□□□ -0.44
APPL1-206ENST00000488530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
APPL1-206ENST00000488530 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
APPL1-206ENST00000488530 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
APPL1-206ENST00000488530 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
APPL1-206ENST00000488530 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
APPL1-206ENST00000488530 ABCB7O75027 752 aa12.03□□□□□ -0.48
APPL1-206ENST00000488530 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
APPL1-206ENST00000488530 POTEHQ6S545 545 aa11.97□□□□□ -0.49
APPL1-206ENST00000488530 RBM42Q9BTD8 480 aaKnown RBP11.85□□□□□ -0.51
APPL1-206ENST00000488530 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
APPL1-206ENST00000488530 POLA2Q14181 598 aa11.79□□□□□ -0.52
APPL1-206ENST00000488530 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
APPL1-206ENST00000488530 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
APPL1-206ENST00000488530 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
APPL1-206ENST00000488530 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
APPL1-206ENST00000488530 AKT1S1Q96B36 256 aa11.53□□□□□ -0.56
APPL1-206ENST00000488530 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
APPL1-206ENST00000488530 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
APPL1-206ENST00000488530 ZBTB22O15209 634 aa11.49□□□□□ -0.57
APPL1-206ENST00000488530 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
APPL1-206ENST00000488530 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
APPL1-206ENST00000488530 FBLN2P98095 1184 aa11.28□□□□□ -0.6
APPL1-206ENST00000488530 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
APPL1-206ENST00000488530 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
APPL1-206ENST00000488530 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
APPL1-206ENST00000488530 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
APPL1-206ENST00000488530 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
APPL1-206ENST00000488530 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
APPL1-206ENST00000488530 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
APPL1-206ENST00000488530 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
APPL1-206ENST00000488530 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
APPL1-206ENST00000488530 HAX1O00165 279 aa11.07□□□□□ -0.64
APPL1-206ENST00000488530 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
APPL1-206ENST00000488530 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
APPL1-206ENST00000488530 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
APPL1-206ENST00000488530 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
APPL1-206ENST00000488530 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
APPL1-206ENST00000488530 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
APPL1-206ENST00000488530 EVX2Q03828 476 aa10.85□□□□□ -0.67
APPL1-206ENST00000488530 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
APPL1-206ENST00000488530 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
APPL1-206ENST00000488530 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
APPL1-206ENST00000488530 GABBR2O75899 941 aa10.67□□□□□ -0.7
APPL1-206ENST00000488530 FARP1Q9Y4F1 1045 aaPredicted RBP10.65□□□□□ -0.7
APPL1-206ENST00000488530 STAG3Q9UJ98 1225 aa10.64□□□□□ -0.71
APPL1-206ENST00000488530 CLCN6P51797 869 aa10.62□□□□□ -0.71
APPL1-206ENST00000488530 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
APPL1-206ENST00000488530 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
APPL1-206ENST00000488530 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
APPL1-206ENST00000488530 LHX8Q68G74 356 aa10.47□□□□□ -0.73
APPL1-206ENST00000488530 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
APPL1-206ENST00000488530 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
APPL1-206ENST00000488530 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
APPL1-206ENST00000488530 POTEIP0CG38 1075 aa10.4□□□□□ -0.74
APPL1-206ENST00000488530 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
APPL1-206ENST00000488530 NPM1P06748 294 aaKnown RBP eCLIP10.39□□□□□ -0.75
APPL1-206ENST00000488530 PROM2Q8N271 834 aa10.32□□□□□ -0.76
APPL1-206ENST00000488530 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
APPL1-206ENST00000488530 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
APPL1-206ENST00000488530 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
APPL1-206ENST00000488530 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
APPL1-206ENST00000488530 FKBP8Q14318 412 aa10.14□□□□□ -0.79
APPL1-206ENST00000488530 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
APPL1-206ENST00000488530 MS4A3Q96HJ5 214 aa10.12□□□□□ -0.79
APPL1-206ENST00000488530 TSPYL2Q9H2G4 693 aaPredicted RBP10.1□□□□□ -0.79
APPL1-206ENST00000488530 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
APPL1-206ENST00000488530 MIER1Q8N108 512 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms