RNA–Protein interactions for RNA: ENST00000488493.1

VTCN1-206, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 4

Gene VTCN1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-206ENST00000488493 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
VTCN1-206ENST00000488493 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
VTCN1-206ENST00000488493 SENP3Q9H4L4 574 aaPredicted RBP19.36■□□□□ 0.69
VTCN1-206ENST00000488493 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
VTCN1-206ENST00000488493 FOXD1Q16676 465 aa18.07■□□□□ 0.48
VTCN1-206ENST00000488493 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
VTCN1-206ENST00000488493 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
VTCN1-206ENST00000488493 ADRA2BP18089 450 aa16.86■□□□□ 0.29
VTCN1-206ENST00000488493 MSH5O43196 834 aa16.84■□□□□ 0.29
VTCN1-206ENST00000488493 PIAS4Q8N2W9 510 aaPredicted RBP16.84■□□□□ 0.29
VTCN1-206ENST00000488493 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
VTCN1-206ENST00000488493 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
VTCN1-206ENST00000488493 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
VTCN1-206ENST00000488493 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
VTCN1-206ENST00000488493 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
VTCN1-206ENST00000488493 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
VTCN1-206ENST00000488493 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
VTCN1-206ENST00000488493 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
VTCN1-206ENST00000488493 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
VTCN1-206ENST00000488493 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
VTCN1-206ENST00000488493 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
VTCN1-206ENST00000488493 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
VTCN1-206ENST00000488493 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
VTCN1-206ENST00000488493 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
VTCN1-206ENST00000488493 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
VTCN1-206ENST00000488493 KCNA4P22459 653 aa14.17□□□□□ -0.14
VTCN1-206ENST00000488493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
VTCN1-206ENST00000488493 U3KPZ7 1027 aaPredicted RBP13.85□□□□□ -0.19
VTCN1-206ENST00000488493 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
VTCN1-206ENST00000488493 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
VTCN1-206ENST00000488493 CAPN15O75808 1086 aa13.53□□□□□ -0.24
VTCN1-206ENST00000488493 DSG3P32926 999 aa13.51□□□□□ -0.25
VTCN1-206ENST00000488493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
VTCN1-206ENST00000488493 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
VTCN1-206ENST00000488493 APLP2Q06481 763 aa13.37□□□□□ -0.27
VTCN1-206ENST00000488493 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
VTCN1-206ENST00000488493 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
VTCN1-206ENST00000488493 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
VTCN1-206ENST00000488493 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
VTCN1-206ENST00000488493 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
VTCN1-206ENST00000488493 ABCB7O75027 752 aa13.24□□□□□ -0.29
VTCN1-206ENST00000488493 FOXD4L1Q9NU39 408 aa13.19□□□□□ -0.3
VTCN1-206ENST00000488493 ZBTB22O15209 634 aa13.07□□□□□ -0.32
VTCN1-206ENST00000488493 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
VTCN1-206ENST00000488493 POLA2Q14181 598 aa13.01□□□□□ -0.33
VTCN1-206ENST00000488493 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
VTCN1-206ENST00000488493 POTEHQ6S545 545 aa12.83□□□□□ -0.36
VTCN1-206ENST00000488493 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
VTCN1-206ENST00000488493 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
VTCN1-206ENST00000488493 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
VTCN1-206ENST00000488493 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
VTCN1-206ENST00000488493 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
VTCN1-206ENST00000488493 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
VTCN1-206ENST00000488493 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
VTCN1-206ENST00000488493 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
VTCN1-206ENST00000488493 FBLN2P98095 1184 aa12.43□□□□□ -0.42
VTCN1-206ENST00000488493 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
VTCN1-206ENST00000488493 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
VTCN1-206ENST00000488493 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
VTCN1-206ENST00000488493 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
VTCN1-206ENST00000488493 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
VTCN1-206ENST00000488493 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
VTCN1-206ENST00000488493 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
VTCN1-206ENST00000488493 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
VTCN1-206ENST00000488493 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
VTCN1-206ENST00000488493 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
VTCN1-206ENST00000488493 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
VTCN1-206ENST00000488493 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
VTCN1-206ENST00000488493 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
VTCN1-206ENST00000488493 HAX1O00165 279 aa11.99□□□□□ -0.49
VTCN1-206ENST00000488493 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
VTCN1-206ENST00000488493 EVX2Q03828 476 aa11.93□□□□□ -0.5
VTCN1-206ENST00000488493 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
VTCN1-206ENST00000488493 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
VTCN1-206ENST00000488493 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
VTCN1-206ENST00000488493 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
VTCN1-206ENST00000488493 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
VTCN1-206ENST00000488493 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
VTCN1-206ENST00000488493 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
VTCN1-206ENST00000488493 GABBR2O75899 941 aa11.63□□□□□ -0.55
VTCN1-206ENST00000488493 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
VTCN1-206ENST00000488493 PROM2Q8N271 834 aa11.62□□□□□ -0.55
VTCN1-206ENST00000488493 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
VTCN1-206ENST00000488493 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
VTCN1-206ENST00000488493 CLCN6P51797 869 aa11.45□□□□□ -0.58
VTCN1-206ENST00000488493 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
VTCN1-206ENST00000488493 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
VTCN1-206ENST00000488493 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
VTCN1-206ENST00000488493 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
VTCN1-206ENST00000488493 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
VTCN1-206ENST00000488493 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
VTCN1-206ENST00000488493 LHX8Q68G74 356 aa11.29□□□□□ -0.6
VTCN1-206ENST00000488493 FKBP8Q14318 412 aa11.27□□□□□ -0.61
VTCN1-206ENST00000488493 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.61
VTCN1-206ENST00000488493 MIER1Q8N108 512 aa11.23□□□□□ -0.61
VTCN1-206ENST00000488493 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
VTCN1-206ENST00000488493 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
VTCN1-206ENST00000488493 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
VTCN1-206ENST00000488493 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
VTCN1-206ENST00000488493 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms