RNA–Protein interactions for RNA: ENST00000488354.1

PSMD1-211, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 659 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-211ENST00000488354 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
PSMD1-211ENST00000488354 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
PSMD1-211ENST00000488354 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
PSMD1-211ENST00000488354 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
PSMD1-211ENST00000488354 FOXD1Q16676 465 aa22.65■■□□□ 1.22
PSMD1-211ENST00000488354 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
PSMD1-211ENST00000488354 MSH5O43196 834 aa21.23■□□□□ 0.99
PSMD1-211ENST00000488354 PIAS4Q8N2W9 510 aaPredicted RBP21.16■□□□□ 0.98
PSMD1-211ENST00000488354 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
PSMD1-211ENST00000488354 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
PSMD1-211ENST00000488354 ADRA2BP18089 450 aa21■□□□□ 0.95
PSMD1-211ENST00000488354 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
PSMD1-211ENST00000488354 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
PSMD1-211ENST00000488354 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
PSMD1-211ENST00000488354 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
PSMD1-211ENST00000488354 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
PSMD1-211ENST00000488354 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
PSMD1-211ENST00000488354 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
PSMD1-211ENST00000488354 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
PSMD1-211ENST00000488354 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
PSMD1-211ENST00000488354 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
PSMD1-211ENST00000488354 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
PSMD1-211ENST00000488354 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
PSMD1-211ENST00000488354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
PSMD1-211ENST00000488354 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
PSMD1-211ENST00000488354 NPM3O75607 178 aaKnown RBP17.6■□□□□ 0.41
PSMD1-211ENST00000488354 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
PSMD1-211ENST00000488354 KCNA4P22459 653 aa17.11■□□□□ 0.33
PSMD1-211ENST00000488354 CAPN15O75808 1086 aa17.06■□□□□ 0.32
PSMD1-211ENST00000488354 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
PSMD1-211ENST00000488354 DSG3P32926 999 aa16.9■□□□□ 0.3
PSMD1-211ENST00000488354 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
PSMD1-211ENST00000488354 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
PSMD1-211ENST00000488354 ABCB7O75027 752 aa16.67■□□□□ 0.26
PSMD1-211ENST00000488354 APLP2Q06481 763 aa16.64■□□□□ 0.25
PSMD1-211ENST00000488354 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
PSMD1-211ENST00000488354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
PSMD1-211ENST00000488354 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
PSMD1-211ENST00000488354 POTEHQ6S545 545 aa16.54■□□□□ 0.24
PSMD1-211ENST00000488354 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
PSMD1-211ENST00000488354 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
PSMD1-211ENST00000488354 POLA2Q14181 598 aa16.21■□□□□ 0.19
PSMD1-211ENST00000488354 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
PSMD1-211ENST00000488354 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
PSMD1-211ENST00000488354 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
PSMD1-211ENST00000488354 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
PSMD1-211ENST00000488354 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
PSMD1-211ENST00000488354 ZBTB12Q9Y330 459 aaPredicted RBP15.76■□□□□ 0.11
PSMD1-211ENST00000488354 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
PSMD1-211ENST00000488354 ZBTB22O15209 634 aa15.69■□□□□ 0.1
PSMD1-211ENST00000488354 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
PSMD1-211ENST00000488354 REM2Q8IYK8 340 aaPredicted RBP15.6■□□□□ 0.09
PSMD1-211ENST00000488354 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
PSMD1-211ENST00000488354 ATXN8OSP0DMR3 200 aa15.45■□□□□ 0.06
PSMD1-211ENST00000488354 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
PSMD1-211ENST00000488354 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
PSMD1-211ENST00000488354 FBLN2P98095 1184 aa15.36■□□□□ 0.05
PSMD1-211ENST00000488354 HAX1O00165 279 aa15.34■□□□□ 0.05
PSMD1-211ENST00000488354 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
PSMD1-211ENST00000488354 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
PSMD1-211ENST00000488354 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
PSMD1-211ENST00000488354 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
PSMD1-211ENST00000488354 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
PSMD1-211ENST00000488354 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
PSMD1-211ENST00000488354 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
PSMD1-211ENST00000488354 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
PSMD1-211ENST00000488354 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
PSMD1-211ENST00000488354 EVX2Q03828 476 aa15.08■□□□□ 0
PSMD1-211ENST00000488354 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
PSMD1-211ENST00000488354 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
PSMD1-211ENST00000488354 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
PSMD1-211ENST00000488354 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
PSMD1-211ENST00000488354 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
PSMD1-211ENST00000488354 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
PSMD1-211ENST00000488354 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
PSMD1-211ENST00000488354 GABBR2O75899 941 aa14.71□□□□□ -0.05
PSMD1-211ENST00000488354 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
PSMD1-211ENST00000488354 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.08
PSMD1-211ENST00000488354 LHX8Q68G74 356 aa14.48□□□□□ -0.09
PSMD1-211ENST00000488354 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
PSMD1-211ENST00000488354 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
PSMD1-211ENST00000488354 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
PSMD1-211ENST00000488354 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
PSMD1-211ENST00000488354 POTEIP0CG38 1075 aa14.36□□□□□ -0.11
PSMD1-211ENST00000488354 DCBLD2Q96PD2 775 aa14.32□□□□□ -0.12
PSMD1-211ENST00000488354 CLCN6P51797 869 aa14.28□□□□□ -0.12
PSMD1-211ENST00000488354 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
PSMD1-211ENST00000488354 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
PSMD1-211ENST00000488354 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
PSMD1-211ENST00000488354 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
PSMD1-211ENST00000488354 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
PSMD1-211ENST00000488354 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
PSMD1-211ENST00000488354 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
PSMD1-211ENST00000488354 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
PSMD1-211ENST00000488354 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
PSMD1-211ENST00000488354 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
PSMD1-211ENST00000488354 OTUD5Q96G74 571 aa13.89□□□□□ -0.19
PSMD1-211ENST00000488354 PROM2Q8N271 834 aa13.85□□□□□ -0.19
PSMD1-211ENST00000488354 MIER1Q8N108 512 aa13.84□□□□□ -0.19
PSMD1-211ENST00000488354 PLSCR2Q9NRY7 297 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms