RNA–Protein interactions for RNA: ENST00000488130.1

CTNNAL1-205, Transcript of catenin alpha like 1, humanhuman

TSL 3

Gene CTNNAL1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNAL1-205ENST00000488130 AEBP2Q6ZN18 517 aaPredicted RBP35.42■■■■□ 3.26
CTNNAL1-205ENST00000488130 CHIC1Q5VXU3 224 aa33.48■■■□□ 2.95
CTNNAL1-205ENST00000488130 SENP3Q9H4L4 574 aaPredicted RBP30.13■■■□□ 2.41
CTNNAL1-205ENST00000488130 PHF23Q9BUL5 403 aaPredicted RBP29.73■■■□□ 2.35
CTNNAL1-205ENST00000488130 FOXD1Q16676 465 aa28.14■■■□□ 2.1
CTNNAL1-205ENST00000488130 PLPPR3Q6T4P5 718 aa26.65■■□□□ 1.86
CTNNAL1-205ENST00000488130 MSH5O43196 834 aa26.31■■□□□ 1.8
CTNNAL1-205ENST00000488130 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
CTNNAL1-205ENST00000488130 PIAS4Q8N2W9 510 aaPredicted RBP26.22■■□□□ 1.79
CTNNAL1-205ENST00000488130 ADRA2BP18089 450 aa26.13■■□□□ 1.77
CTNNAL1-205ENST00000488130 POTEDQ86YR6 584 aa25.92■■□□□ 1.74
CTNNAL1-205ENST00000488130 MAPK8IP2Q13387 824 aaPredicted RBP24.04■■□□□ 1.44
CTNNAL1-205ENST00000488130 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
CTNNAL1-205ENST00000488130 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
CTNNAL1-205ENST00000488130 PPP4R3CPQ6ZMV5 832 aa23.37■■□□□ 1.33
CTNNAL1-205ENST00000488130 HOXD11P31277 338 aaPredicted RBP23.01■■□□□ 1.27
CTNNAL1-205ENST00000488130 CNKSR2Q8WXI2 1034 aa22.93■■□□□ 1.26
CTNNAL1-205ENST00000488130 DCAF8L1A6NGE4 600 aa22.81■■□□□ 1.24
CTNNAL1-205ENST00000488130 RNF216Q9NWF9 866 aaPredicted RBP22.77■■□□□ 1.24
CTNNAL1-205ENST00000488130 CACNB1Q02641 598 aaPredicted RBP22.61■■□□□ 1.21
CTNNAL1-205ENST00000488130 RNF39Q9H2S5 420 aa22.51■■□□□ 1.19
CTNNAL1-205ENST00000488130 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
CTNNAL1-205ENST00000488130 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
CTNNAL1-205ENST00000488130 NPM3O75607 178 aaKnown RBP22.14■■□□□ 1.13
CTNNAL1-205ENST00000488130 C1QBPQ07021 282 aaKnown RBP22.12■■□□□ 1.13
CTNNAL1-205ENST00000488130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.82■■□□□ 1.08
CTNNAL1-205ENST00000488130 KCNA4P22459 653 aa21.63■■□□□ 1.05
CTNNAL1-205ENST00000488130 U3KPZ7 1027 aaPredicted RBP21.45■■□□□ 1.02
CTNNAL1-205ENST00000488130 SLC4A2P04920 1241 aa21.21■□□□□ 0.99
CTNNAL1-205ENST00000488130 SPINK5Q9NQ38 1064 aaPredicted RBP21.16■□□□□ 0.98
CTNNAL1-205ENST00000488130 CAPN15O75808 1086 aa21.04■□□□□ 0.96
CTNNAL1-205ENST00000488130 DSG3P32926 999 aa21.03■□□□□ 0.96
CTNNAL1-205ENST00000488130 APLP2Q06481 763 aa20.7■□□□□ 0.9
CTNNAL1-205ENST00000488130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
CTNNAL1-205ENST00000488130 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
CTNNAL1-205ENST00000488130 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
CTNNAL1-205ENST00000488130 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
CTNNAL1-205ENST00000488130 SAMD1Q6SPF0 538 aaPredicted RBP20.61■□□□□ 0.89
CTNNAL1-205ENST00000488130 ABCB7O75027 752 aa20.58■□□□□ 0.89
CTNNAL1-205ENST00000488130 MYCNP04198 464 aaPredicted RBP20.44■□□□□ 0.86
CTNNAL1-205ENST00000488130 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
CTNNAL1-205ENST00000488130 POTEHQ6S545 545 aa20.26■□□□□ 0.83
CTNNAL1-205ENST00000488130 FOXD4L1Q9NU39 408 aa20.18■□□□□ 0.82
CTNNAL1-205ENST00000488130 POLA2Q14181 598 aa20.13■□□□□ 0.81
CTNNAL1-205ENST00000488130 ATF5Q9Y2D1 282 aaPredicted RBP20.05■□□□□ 0.8
CTNNAL1-205ENST00000488130 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
CTNNAL1-205ENST00000488130 ZBTB22O15209 634 aa19.95■□□□□ 0.78
CTNNAL1-205ENST00000488130 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
CTNNAL1-205ENST00000488130 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
CTNNAL1-205ENST00000488130 ATXN8OSP0DMR3 200 aa19.57■□□□□ 0.72
CTNNAL1-205ENST00000488130 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
CTNNAL1-205ENST00000488130 AKT1S1Q96B36 256 aa19.54■□□□□ 0.72
CTNNAL1-205ENST00000488130 REM2Q8IYK8 340 aaPredicted RBP19.38■□□□□ 0.69
CTNNAL1-205ENST00000488130 PITPNM1O00562 1244 aa19.19■□□□□ 0.66
CTNNAL1-205ENST00000488130 PIP4P2Q8N4L2 257 aa19.18■□□□□ 0.66
CTNNAL1-205ENST00000488130 FBLN2P98095 1184 aa19.14■□□□□ 0.65
CTNNAL1-205ENST00000488130 MKRN4PQ13434 485 aaPredicted RBP19.13■□□□□ 0.65
CTNNAL1-205ENST00000488130 SPDYE2BA6NHP3 402 aa19.11■□□□□ 0.65
CTNNAL1-205ENST00000488130 SPDYE6P0CI01 402 aa19.11■□□□□ 0.65
CTNNAL1-205ENST00000488130 SPDYE2Q495Y8 402 aa19.11■□□□□ 0.65
CTNNAL1-205ENST00000488130 FXR2P51116 673 aaKnown RBP eCLIP19.06■□□□□ 0.64
CTNNAL1-205ENST00000488130 SP7Q8TDD2 431 aaPredicted RBP18.95■□□□□ 0.62
CTNNAL1-205ENST00000488130 SSUH2Q9Y2M2 353 aa18.9■□□□□ 0.62
CTNNAL1-205ENST00000488130 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CTNNAL1-205ENST00000488130 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
CTNNAL1-205ENST00000488130 HAX1O00165 279 aa18.77■□□□□ 0.6
CTNNAL1-205ENST00000488130 SPDYE1Q8NFV5 336 aaPredicted RBP18.77■□□□□ 0.6
CTNNAL1-205ENST00000488130 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
CTNNAL1-205ENST00000488130 PRKAR2AP13861 404 aaKnown RBP18.65■□□□□ 0.58
CTNNAL1-205ENST00000488130 EVX2Q03828 476 aa18.65■□□□□ 0.58
CTNNAL1-205ENST00000488130 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
CTNNAL1-205ENST00000488130 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
CTNNAL1-205ENST00000488130 C19orf67A6NJJ6 358 aa18.45■□□□□ 0.54
CTNNAL1-205ENST00000488130 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
CTNNAL1-205ENST00000488130 PRR29P0C7W0 189 aa18.39■□□□□ 0.53
CTNNAL1-205ENST00000488130 GABBR2O75899 941 aa18.17■□□□□ 0.5
CTNNAL1-205ENST00000488130 FARP1Q9Y4F1 1045 aaPredicted RBP18.15■□□□□ 0.5
CTNNAL1-205ENST00000488130 SPDYE4A6NLX3 237 aa18.08■□□□□ 0.48
CTNNAL1-205ENST00000488130 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
CTNNAL1-205ENST00000488130 CREBZFQ9NS37 354 aa18.01■□□□□ 0.47
CTNNAL1-205ENST00000488130 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
CTNNAL1-205ENST00000488130 POTEIP0CG38 1075 aa17.85■□□□□ 0.45
CTNNAL1-205ENST00000488130 ZNF579Q8NAF0 562 aaKnown RBP17.82■□□□□ 0.44
CTNNAL1-205ENST00000488130 CLCN6P51797 869 aa17.8■□□□□ 0.44
CTNNAL1-205ENST00000488130 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
CTNNAL1-205ENST00000488130 PROM2Q8N271 834 aa17.75■□□□□ 0.43
CTNNAL1-205ENST00000488130 LHX8Q68G74 356 aa17.74■□□□□ 0.43
CTNNAL1-205ENST00000488130 MNX1P50219 401 aaPredicted RBP17.73■□□□□ 0.43
CTNNAL1-205ENST00000488130 GALR2O43603 387 aaPredicted RBP17.6■□□□□ 0.41
CTNNAL1-205ENST00000488130 DCBLD2Q96PD2 775 aa17.58■□□□□ 0.4
CTNNAL1-205ENST00000488130 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTNNAL1-205ENST00000488130 PHF12Q96QT6 1004 aa17.56■□□□□ 0.4
CTNNAL1-205ENST00000488130 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
CTNNAL1-205ENST00000488130 MS4A3Q96HJ5 214 aa17.33■□□□□ 0.36
CTNNAL1-205ENST00000488130 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
CTNNAL1-205ENST00000488130 CCDC61Q9Y6R9 512 aa17.29■□□□□ 0.36
CTNNAL1-205ENST00000488130 TSPYL2Q9H2G4 693 aaPredicted RBP17.27■□□□□ 0.36
CTNNAL1-205ENST00000488130 POTEB2H3BUK9 544 aa17.25■□□□□ 0.35
CTNNAL1-205ENST00000488130 ASTLQ6HA08 431 aaPredicted RBP17.23■□□□□ 0.35
CTNNAL1-205ENST00000488130 MIER1Q8N108 512 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms