RNA–Protein interactions for RNA: ENST00000487987.1

RABGAP1L-217, Transcript of RAB GTPase activating protein 1 like, humanhuman

TSL 3

Gene RABGAP1L, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1L-217ENST00000487987 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
RABGAP1L-217ENST00000487987 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
RABGAP1L-217ENST00000487987 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
RABGAP1L-217ENST00000487987 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
RABGAP1L-217ENST00000487987 FOXD1Q16676 465 aa21.25■□□□□ 0.99
RABGAP1L-217ENST00000487987 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
RABGAP1L-217ENST00000487987 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
RABGAP1L-217ENST00000487987 MSH5O43196 834 aa19.98■□□□□ 0.79
RABGAP1L-217ENST00000487987 PIAS4Q8N2W9 510 aaPredicted RBP19.93■□□□□ 0.78
RABGAP1L-217ENST00000487987 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
RABGAP1L-217ENST00000487987 ADRA2BP18089 450 aa19.89■□□□□ 0.77
RABGAP1L-217ENST00000487987 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
RABGAP1L-217ENST00000487987 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
RABGAP1L-217ENST00000487987 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
RABGAP1L-217ENST00000487987 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
RABGAP1L-217ENST00000487987 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
RABGAP1L-217ENST00000487987 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
RABGAP1L-217ENST00000487987 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
RABGAP1L-217ENST00000487987 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
RABGAP1L-217ENST00000487987 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
RABGAP1L-217ENST00000487987 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
RABGAP1L-217ENST00000487987 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
RABGAP1L-217ENST00000487987 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
RABGAP1L-217ENST00000487987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
RABGAP1L-217ENST00000487987 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
RABGAP1L-217ENST00000487987 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
RABGAP1L-217ENST00000487987 KCNA4P22459 653 aa16.64■□□□□ 0.25
RABGAP1L-217ENST00000487987 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
RABGAP1L-217ENST00000487987 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
RABGAP1L-217ENST00000487987 CAPN15O75808 1086 aa16.1■□□□□ 0.17
RABGAP1L-217ENST00000487987 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
RABGAP1L-217ENST00000487987 DSG3P32926 999 aa15.88■□□□□ 0.13
RABGAP1L-217ENST00000487987 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
RABGAP1L-217ENST00000487987 APLP2Q06481 763 aa15.86■□□□□ 0.13
RABGAP1L-217ENST00000487987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
RABGAP1L-217ENST00000487987 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
RABGAP1L-217ENST00000487987 POTEHQ6S545 545 aa15.79■□□□□ 0.12
RABGAP1L-217ENST00000487987 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
RABGAP1L-217ENST00000487987 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
RABGAP1L-217ENST00000487987 ABCB7O75027 752 aa15.74■□□□□ 0.11
RABGAP1L-217ENST00000487987 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
RABGAP1L-217ENST00000487987 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
RABGAP1L-217ENST00000487987 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
RABGAP1L-217ENST00000487987 POLA2Q14181 598 aa15.41■□□□□ 0.06
RABGAP1L-217ENST00000487987 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
RABGAP1L-217ENST00000487987 ZBTB22O15209 634 aa15.27■□□□□ 0.04
RABGAP1L-217ENST00000487987 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
RABGAP1L-217ENST00000487987 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
RABGAP1L-217ENST00000487987 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
RABGAP1L-217ENST00000487987 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
RABGAP1L-217ENST00000487987 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
RABGAP1L-217ENST00000487987 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
RABGAP1L-217ENST00000487987 FBLN2P98095 1184 aa14.75□□□□□ -0.05
RABGAP1L-217ENST00000487987 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
RABGAP1L-217ENST00000487987 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
RABGAP1L-217ENST00000487987 SP7Q8TDD2 431 aaPredicted RBP14.59□□□□□ -0.07
RABGAP1L-217ENST00000487987 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
RABGAP1L-217ENST00000487987 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
RABGAP1L-217ENST00000487987 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
RABGAP1L-217ENST00000487987 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
RABGAP1L-217ENST00000487987 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
RABGAP1L-217ENST00000487987 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
RABGAP1L-217ENST00000487987 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
RABGAP1L-217ENST00000487987 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
RABGAP1L-217ENST00000487987 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
RABGAP1L-217ENST00000487987 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
RABGAP1L-217ENST00000487987 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
RABGAP1L-217ENST00000487987 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
RABGAP1L-217ENST00000487987 HAX1O00165 279 aa14.32□□□□□ -0.12
RABGAP1L-217ENST00000487987 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
RABGAP1L-217ENST00000487987 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
RABGAP1L-217ENST00000487987 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
RABGAP1L-217ENST00000487987 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
RABGAP1L-217ENST00000487987 EVX2Q03828 476 aa14.05□□□□□ -0.16
RABGAP1L-217ENST00000487987 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
RABGAP1L-217ENST00000487987 C19orf67A6NJJ6 358 aa13.92□□□□□ -0.18
RABGAP1L-217ENST00000487987 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
RABGAP1L-217ENST00000487987 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
RABGAP1L-217ENST00000487987 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
RABGAP1L-217ENST00000487987 GABBR2O75899 941 aa13.75□□□□□ -0.21
RABGAP1L-217ENST00000487987 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
RABGAP1L-217ENST00000487987 LHX8Q68G74 356 aa13.67□□□□□ -0.22
RABGAP1L-217ENST00000487987 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
RABGAP1L-217ENST00000487987 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
RABGAP1L-217ENST00000487987 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
RABGAP1L-217ENST00000487987 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
RABGAP1L-217ENST00000487987 CLCN6P51797 869 aa13.47□□□□□ -0.25
RABGAP1L-217ENST00000487987 PROM2Q8N271 834 aa13.47□□□□□ -0.25
RABGAP1L-217ENST00000487987 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
RABGAP1L-217ENST00000487987 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
RABGAP1L-217ENST00000487987 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
RABGAP1L-217ENST00000487987 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
RABGAP1L-217ENST00000487987 MIER1Q8N108 512 aa13.38□□□□□ -0.27
RABGAP1L-217ENST00000487987 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
RABGAP1L-217ENST00000487987 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
RABGAP1L-217ENST00000487987 FKBP8Q14318 412 aa13.33□□□□□ -0.28
RABGAP1L-217ENST00000487987 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
RABGAP1L-217ENST00000487987 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
RABGAP1L-217ENST00000487987 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
RABGAP1L-217ENST00000487987 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms