RNA–Protein interactions for RNA: ENST00000487347.1

LPP-217, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-217ENST00000487347 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
LPP-217ENST00000487347 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
LPP-217ENST00000487347 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
LPP-217ENST00000487347 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
LPP-217ENST00000487347 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
LPP-217ENST00000487347 ADRA2BP18089 450 aa16.32■□□□□ 0.2
LPP-217ENST00000487347 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
LPP-217ENST00000487347 FOXD1Q16676 465 aa16.12■□□□□ 0.17
LPP-217ENST00000487347 KCNA4P22459 653 aa16■□□□□ 0.15
LPP-217ENST00000487347 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
LPP-217ENST00000487347 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
LPP-217ENST00000487347 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
LPP-217ENST00000487347 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
LPP-217ENST00000487347 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
LPP-217ENST00000487347 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
LPP-217ENST00000487347 NPM3O75607 178 aaKnown RBP15.05■□□□□ -0
LPP-217ENST00000487347 ZBTB22O15209 634 aa14.8□□□□□ -0.04
LPP-217ENST00000487347 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
LPP-217ENST00000487347 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
LPP-217ENST00000487347 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
LPP-217ENST00000487347 MSH5O43196 834 aa14.46□□□□□ -0.09
LPP-217ENST00000487347 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
LPP-217ENST00000487347 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
LPP-217ENST00000487347 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
LPP-217ENST00000487347 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
LPP-217ENST00000487347 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
LPP-217ENST00000487347 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
LPP-217ENST00000487347 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
LPP-217ENST00000487347 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
LPP-217ENST00000487347 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
LPP-217ENST00000487347 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
LPP-217ENST00000487347 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
LPP-217ENST00000487347 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
LPP-217ENST00000487347 FKBP8Q14318 412 aa13.72□□□□□ -0.21
LPP-217ENST00000487347 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
LPP-217ENST00000487347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
LPP-217ENST00000487347 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
LPP-217ENST00000487347 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
LPP-217ENST00000487347 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
LPP-217ENST00000487347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
LPP-217ENST00000487347 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
LPP-217ENST00000487347 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
LPP-217ENST00000487347 PROM2Q8N271 834 aa12.97□□□□□ -0.33
LPP-217ENST00000487347 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
LPP-217ENST00000487347 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
LPP-217ENST00000487347 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
LPP-217ENST00000487347 APLP2Q06481 763 aa12.92□□□□□ -0.34
LPP-217ENST00000487347 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
LPP-217ENST00000487347 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
LPP-217ENST00000487347 IFNLR1Q8IU57 520 aaPredicted RBP12.77□□□□□ -0.37
LPP-217ENST00000487347 FBLN2P98095 1184 aa12.73□□□□□ -0.37
LPP-217ENST00000487347 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
LPP-217ENST00000487347 PKD2Q13563 968 aa12.66□□□□□ -0.38
LPP-217ENST00000487347 POLA2Q14181 598 aa12.66□□□□□ -0.38
LPP-217ENST00000487347 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
LPP-217ENST00000487347 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
LPP-217ENST00000487347 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
LPP-217ENST00000487347 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
LPP-217ENST00000487347 CAPN15O75808 1086 aa12.51□□□□□ -0.41
LPP-217ENST00000487347 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
LPP-217ENST00000487347 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
LPP-217ENST00000487347 BCANQ96GW7 911 aa12.42□□□□□ -0.42
LPP-217ENST00000487347 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
LPP-217ENST00000487347 ABCB7O75027 752 aa12.38□□□□□ -0.43
LPP-217ENST00000487347 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
LPP-217ENST00000487347 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
LPP-217ENST00000487347 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
LPP-217ENST00000487347 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
LPP-217ENST00000487347 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
LPP-217ENST00000487347 PRKCSHP14314 528 aaPredicted RBP12.33□□□□□ -0.44
LPP-217ENST00000487347 KDM2AQ9Y2K7 1162 aa12.33□□□□□ -0.44
LPP-217ENST00000487347 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
LPP-217ENST00000487347 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.3□□□□□ -0.44
LPP-217ENST00000487347 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
LPP-217ENST00000487347 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
LPP-217ENST00000487347 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
LPP-217ENST00000487347 RGL2O15211 777 aa12.26□□□□□ -0.45
LPP-217ENST00000487347 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
LPP-217ENST00000487347 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
LPP-217ENST00000487347 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
LPP-217ENST00000487347 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
LPP-217ENST00000487347 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
LPP-217ENST00000487347 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
LPP-217ENST00000487347 DSG3P32926 999 aa12.2□□□□□ -0.46
LPP-217ENST00000487347 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
LPP-217ENST00000487347 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
LPP-217ENST00000487347 MIER1Q8N108 512 aa12.15□□□□□ -0.46
LPP-217ENST00000487347 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
LPP-217ENST00000487347 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
LPP-217ENST00000487347 TPRNQ4KMQ1 711 aa12.09□□□□□ -0.47
LPP-217ENST00000487347 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
LPP-217ENST00000487347 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
LPP-217ENST00000487347 DNAJC5Q9H3Z4 198 aa12.03□□□□□ -0.48
LPP-217ENST00000487347 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
LPP-217ENST00000487347 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
LPP-217ENST00000487347 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
LPP-217ENST00000487347 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
LPP-217ENST00000487347 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
LPP-217ENST00000487347 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
LPP-217ENST00000487347 NUBP1P53384 320 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms