RNA–Protein interactions for RNA: ENST00000487313.1

BRWD3-204, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

TSL 3

Gene BRWD3, Length 367 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-204ENST00000487313 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
BRWD3-204ENST00000487313 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
BRWD3-204ENST00000487313 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
BRWD3-204ENST00000487313 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
BRWD3-204ENST00000487313 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
BRWD3-204ENST00000487313 FOXD1Q16676 465 aa16.17■□□□□ 0.18
BRWD3-204ENST00000487313 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
BRWD3-204ENST00000487313 ADRA2BP18089 450 aa15.62■□□□□ 0.09
BRWD3-204ENST00000487313 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
BRWD3-204ENST00000487313 MSH5O43196 834 aa14.75□□□□□ -0.05
BRWD3-204ENST00000487313 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
BRWD3-204ENST00000487313 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
BRWD3-204ENST00000487313 KCNA4P22459 653 aa14.16□□□□□ -0.14
BRWD3-204ENST00000487313 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
BRWD3-204ENST00000487313 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
BRWD3-204ENST00000487313 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
BRWD3-204ENST00000487313 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
BRWD3-204ENST00000487313 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
BRWD3-204ENST00000487313 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
BRWD3-204ENST00000487313 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
BRWD3-204ENST00000487313 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
BRWD3-204ENST00000487313 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
BRWD3-204ENST00000487313 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
BRWD3-204ENST00000487313 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
BRWD3-204ENST00000487313 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
BRWD3-204ENST00000487313 ZBTB22O15209 634 aa13.08□□□□□ -0.32
BRWD3-204ENST00000487313 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
BRWD3-204ENST00000487313 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
BRWD3-204ENST00000487313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRWD3-204ENST00000487313 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
BRWD3-204ENST00000487313 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
BRWD3-204ENST00000487313 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
BRWD3-204ENST00000487313 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
BRWD3-204ENST00000487313 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
BRWD3-204ENST00000487313 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
BRWD3-204ENST00000487313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
BRWD3-204ENST00000487313 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
BRWD3-204ENST00000487313 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
BRWD3-204ENST00000487313 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
BRWD3-204ENST00000487313 ATXN8OSP0DMR3 200 aa12.4□□□□□ -0.42
BRWD3-204ENST00000487313 CAPN15O75808 1086 aa12.35□□□□□ -0.43
BRWD3-204ENST00000487313 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
BRWD3-204ENST00000487313 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
BRWD3-204ENST00000487313 APLP2Q06481 763 aa12.29□□□□□ -0.44
BRWD3-204ENST00000487313 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
BRWD3-204ENST00000487313 ABCB7O75027 752 aa12.18□□□□□ -0.46
BRWD3-204ENST00000487313 DSG3P32926 999 aa12.14□□□□□ -0.47
BRWD3-204ENST00000487313 POLA2Q14181 598 aa12.13□□□□□ -0.47
BRWD3-204ENST00000487313 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
BRWD3-204ENST00000487313 FBLN2P98095 1184 aa11.8□□□□□ -0.52
BRWD3-204ENST00000487313 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
BRWD3-204ENST00000487313 OSCARQ8IYS5 282 aa11.73□□□□□ -0.53
BRWD3-204ENST00000487313 FKBP8Q14318 412 aa11.72□□□□□ -0.53
BRWD3-204ENST00000487313 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
BRWD3-204ENST00000487313 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
BRWD3-204ENST00000487313 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
BRWD3-204ENST00000487313 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
BRWD3-204ENST00000487313 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
BRWD3-204ENST00000487313 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
BRWD3-204ENST00000487313 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
BRWD3-204ENST00000487313 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
BRWD3-204ENST00000487313 PROM2Q8N271 834 aa11.42□□□□□ -0.58
BRWD3-204ENST00000487313 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
BRWD3-204ENST00000487313 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
BRWD3-204ENST00000487313 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
BRWD3-204ENST00000487313 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
BRWD3-204ENST00000487313 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
BRWD3-204ENST00000487313 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
BRWD3-204ENST00000487313 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
BRWD3-204ENST00000487313 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
BRWD3-204ENST00000487313 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
BRWD3-204ENST00000487313 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
BRWD3-204ENST00000487313 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
BRWD3-204ENST00000487313 MIER1Q8N108 512 aa11.01□□□□□ -0.65
BRWD3-204ENST00000487313 CHADLQ6NUI6 762 aa10.99□□□□□ -0.65
BRWD3-204ENST00000487313 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
BRWD3-204ENST00000487313 PLCD3Q8N3E9 789 aa10.98□□□□□ -0.65
BRWD3-204ENST00000487313 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.66
BRWD3-204ENST00000487313 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
BRWD3-204ENST00000487313 PRKAR2AP13861 404 aaKnown RBP10.91□□□□□ -0.66
BRWD3-204ENST00000487313 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
BRWD3-204ENST00000487313 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
BRWD3-204ENST00000487313 PLEKHG5O94827 1062 aa10.82□□□□□ -0.68
BRWD3-204ENST00000487313 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
BRWD3-204ENST00000487313 SPOCK2Q92563 424 aa10.78□□□□□ -0.68
BRWD3-204ENST00000487313 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
BRWD3-204ENST00000487313 NUBP1P53384 320 aa10.76□□□□□ -0.69
BRWD3-204ENST00000487313 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
BRWD3-204ENST00000487313 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
BRWD3-204ENST00000487313 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
BRWD3-204ENST00000487313 PKD2Q13563 968 aa10.66□□□□□ -0.7
BRWD3-204ENST00000487313 AMER1Q5JTC6 1135 aaPredicted RBP10.66□□□□□ -0.7
BRWD3-204ENST00000487313 POTEHQ6S545 545 aa10.65□□□□□ -0.7
BRWD3-204ENST00000487313 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
BRWD3-204ENST00000487313 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
BRWD3-204ENST00000487313 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
BRWD3-204ENST00000487313 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
BRWD3-204ENST00000487313 EVX2Q03828 476 aa10.59□□□□□ -0.71
BRWD3-204ENST00000487313 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
BRWD3-204ENST00000487313 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms