RNA–Protein interactions for RNA: ENST00000487107.1

SKIDA1-203, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 3

Gene SKIDA1, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-203ENST00000487107 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
SKIDA1-203ENST00000487107 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
SKIDA1-203ENST00000487107 SENP3Q9H4L4 574 aaPredicted RBP18.21■□□□□ 0.51
SKIDA1-203ENST00000487107 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
SKIDA1-203ENST00000487107 FOXD1Q16676 465 aa17.03■□□□□ 0.32
SKIDA1-203ENST00000487107 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
SKIDA1-203ENST00000487107 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
SKIDA1-203ENST00000487107 ADRA2BP18089 450 aa15.99■□□□□ 0.15
SKIDA1-203ENST00000487107 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
SKIDA1-203ENST00000487107 MSH5O43196 834 aa15.82■□□□□ 0.12
SKIDA1-203ENST00000487107 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
SKIDA1-203ENST00000487107 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
SKIDA1-203ENST00000487107 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
SKIDA1-203ENST00000487107 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
SKIDA1-203ENST00000487107 PPP4R3CPQ6ZMV5 832 aa14.37□□□□□ -0.11
SKIDA1-203ENST00000487107 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
SKIDA1-203ENST00000487107 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
SKIDA1-203ENST00000487107 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
SKIDA1-203ENST00000487107 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
SKIDA1-203ENST00000487107 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
SKIDA1-203ENST00000487107 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
SKIDA1-203ENST00000487107 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
SKIDA1-203ENST00000487107 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
SKIDA1-203ENST00000487107 KCNA4P22459 653 aa13.49□□□□□ -0.25
SKIDA1-203ENST00000487107 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
SKIDA1-203ENST00000487107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
SKIDA1-203ENST00000487107 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
SKIDA1-203ENST00000487107 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
SKIDA1-203ENST00000487107 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
SKIDA1-203ENST00000487107 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
SKIDA1-203ENST00000487107 CAPN15O75808 1086 aa12.83□□□□□ -0.36
SKIDA1-203ENST00000487107 DSG3P32926 999 aa12.74□□□□□ -0.37
SKIDA1-203ENST00000487107 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
SKIDA1-203ENST00000487107 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
SKIDA1-203ENST00000487107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
SKIDA1-203ENST00000487107 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
SKIDA1-203ENST00000487107 APLP2Q06481 763 aa12.6□□□□□ -0.39
SKIDA1-203ENST00000487107 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
SKIDA1-203ENST00000487107 ABCB7O75027 752 aa12.58□□□□□ -0.4
SKIDA1-203ENST00000487107 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
SKIDA1-203ENST00000487107 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
SKIDA1-203ENST00000487107 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
SKIDA1-203ENST00000487107 ZBTB22O15209 634 aa12.41□□□□□ -0.42
SKIDA1-203ENST00000487107 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SKIDA1-203ENST00000487107 POLA2Q14181 598 aa12.34□□□□□ -0.43
SKIDA1-203ENST00000487107 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
SKIDA1-203ENST00000487107 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
SKIDA1-203ENST00000487107 POTEHQ6S545 545 aa12.04□□□□□ -0.48
SKIDA1-203ENST00000487107 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
SKIDA1-203ENST00000487107 OSCARQ8IYS5 282 aa11.93□□□□□ -0.5
SKIDA1-203ENST00000487107 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
SKIDA1-203ENST00000487107 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
SKIDA1-203ENST00000487107 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
SKIDA1-203ENST00000487107 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
SKIDA1-203ENST00000487107 FBLN2P98095 1184 aa11.78□□□□□ -0.52
SKIDA1-203ENST00000487107 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
SKIDA1-203ENST00000487107 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
SKIDA1-203ENST00000487107 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
SKIDA1-203ENST00000487107 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
SKIDA1-203ENST00000487107 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
SKIDA1-203ENST00000487107 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
SKIDA1-203ENST00000487107 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
SKIDA1-203ENST00000487107 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
SKIDA1-203ENST00000487107 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
SKIDA1-203ENST00000487107 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
SKIDA1-203ENST00000487107 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
SKIDA1-203ENST00000487107 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
SKIDA1-203ENST00000487107 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
SKIDA1-203ENST00000487107 HAX1O00165 279 aa11.36□□□□□ -0.59
SKIDA1-203ENST00000487107 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
SKIDA1-203ENST00000487107 SP7Q8TDD2 431 aaPredicted RBP11.32□□□□□ -0.6
SKIDA1-203ENST00000487107 EVX2Q03828 476 aa11.29□□□□□ -0.6
SKIDA1-203ENST00000487107 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
SKIDA1-203ENST00000487107 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
SKIDA1-203ENST00000487107 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
SKIDA1-203ENST00000487107 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
SKIDA1-203ENST00000487107 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
SKIDA1-203ENST00000487107 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
SKIDA1-203ENST00000487107 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
SKIDA1-203ENST00000487107 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
SKIDA1-203ENST00000487107 GABBR2O75899 941 aa10.98□□□□□ -0.65
SKIDA1-203ENST00000487107 PROM2Q8N271 834 aa10.95□□□□□ -0.66
SKIDA1-203ENST00000487107 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
SKIDA1-203ENST00000487107 ZRANB1Q9UGI0 708 aa10.86□□□□□ -0.67
SKIDA1-203ENST00000487107 ZNF579Q8NAF0 562 aaKnown RBP10.8□□□□□ -0.68
SKIDA1-203ENST00000487107 NPM1P06748 294 aaKnown RBP eCLIP10.79□□□□□ -0.68
SKIDA1-203ENST00000487107 FKBP8Q14318 412 aa10.79□□□□□ -0.68
SKIDA1-203ENST00000487107 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
SKIDA1-203ENST00000487107 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
SKIDA1-203ENST00000487107 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
SKIDA1-203ENST00000487107 CLCN6P51797 869 aa10.72□□□□□ -0.69
SKIDA1-203ENST00000487107 MIER1Q8N108 512 aa10.72□□□□□ -0.69
SKIDA1-203ENST00000487107 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
SKIDA1-203ENST00000487107 DCBLD2Q96PD2 775 aa10.68□□□□□ -0.7
SKIDA1-203ENST00000487107 TSPYL2Q9H2G4 693 aaPredicted RBP10.67□□□□□ -0.7
SKIDA1-203ENST00000487107 LHX8Q68G74 356 aa10.64□□□□□ -0.71
SKIDA1-203ENST00000487107 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
SKIDA1-203ENST00000487107 PLCD3Q8N3E9 789 aa10.63□□□□□ -0.71
SKIDA1-203ENST00000487107 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
SKIDA1-203ENST00000487107 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms