RNA–Protein interactions for RNA: ENST00000487080.1

CHMP5-203, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2

Gene CHMP5, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-203ENST00000487080 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
CHMP5-203ENST00000487080 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
CHMP5-203ENST00000487080 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
CHMP5-203ENST00000487080 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
CHMP5-203ENST00000487080 FOXD1Q16676 465 aa15.28■□□□□ 0.04
CHMP5-203ENST00000487080 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
CHMP5-203ENST00000487080 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
CHMP5-203ENST00000487080 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
CHMP5-203ENST00000487080 ADRA2BP18089 450 aa14.51□□□□□ -0.09
CHMP5-203ENST00000487080 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
CHMP5-203ENST00000487080 MSH5O43196 834 aa14.25□□□□□ -0.13
CHMP5-203ENST00000487080 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
CHMP5-203ENST00000487080 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
CHMP5-203ENST00000487080 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
CHMP5-203ENST00000487080 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
CHMP5-203ENST00000487080 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
CHMP5-203ENST00000487080 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
CHMP5-203ENST00000487080 KCNA4P22459 653 aa12.83□□□□□ -0.36
CHMP5-203ENST00000487080 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
CHMP5-203ENST00000487080 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
CHMP5-203ENST00000487080 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
CHMP5-203ENST00000487080 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
CHMP5-203ENST00000487080 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
CHMP5-203ENST00000487080 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
CHMP5-203ENST00000487080 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
CHMP5-203ENST00000487080 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
CHMP5-203ENST00000487080 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
CHMP5-203ENST00000487080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHMP5-203ENST00000487080 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
CHMP5-203ENST00000487080 U3KPZ7 1027 aaPredicted RBP11.96□□□□□ -0.49
CHMP5-203ENST00000487080 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
CHMP5-203ENST00000487080 ZBTB22O15209 634 aa11.82□□□□□ -0.52
CHMP5-203ENST00000487080 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
CHMP5-203ENST00000487080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
CHMP5-203ENST00000487080 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
CHMP5-203ENST00000487080 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
CHMP5-203ENST00000487080 APLP2Q06481 763 aa11.68□□□□□ -0.54
CHMP5-203ENST00000487080 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
CHMP5-203ENST00000487080 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
CHMP5-203ENST00000487080 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
CHMP5-203ENST00000487080 CAPN15O75808 1086 aa11.55□□□□□ -0.56
CHMP5-203ENST00000487080 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
CHMP5-203ENST00000487080 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
CHMP5-203ENST00000487080 DSG3P32926 999 aa11.48□□□□□ -0.57
CHMP5-203ENST00000487080 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
CHMP5-203ENST00000487080 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
CHMP5-203ENST00000487080 POTEHQ6S545 545 aa11.35□□□□□ -0.59
CHMP5-203ENST00000487080 ABCB7O75027 752 aa11.3□□□□□ -0.6
CHMP5-203ENST00000487080 POLA2Q14181 598 aa11.28□□□□□ -0.6
CHMP5-203ENST00000487080 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
CHMP5-203ENST00000487080 FBLN2P98095 1184 aa10.98□□□□□ -0.65
CHMP5-203ENST00000487080 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
CHMP5-203ENST00000487080 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CHMP5-203ENST00000487080 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
CHMP5-203ENST00000487080 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
CHMP5-203ENST00000487080 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
CHMP5-203ENST00000487080 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
CHMP5-203ENST00000487080 AKT1S1Q96B36 256 aa10.79□□□□□ -0.68
CHMP5-203ENST00000487080 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
CHMP5-203ENST00000487080 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
CHMP5-203ENST00000487080 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
CHMP5-203ENST00000487080 CHRDL2Q6WN34 429 aa10.64□□□□□ -0.71
CHMP5-203ENST00000487080 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
CHMP5-203ENST00000487080 PROM2Q8N271 834 aa10.56□□□□□ -0.72
CHMP5-203ENST00000487080 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHMP5-203ENST00000487080 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
CHMP5-203ENST00000487080 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
CHMP5-203ENST00000487080 FKBP8Q14318 412 aa10.46□□□□□ -0.73
CHMP5-203ENST00000487080 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.73
CHMP5-203ENST00000487080 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHMP5-203ENST00000487080 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
CHMP5-203ENST00000487080 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
CHMP5-203ENST00000487080 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
CHMP5-203ENST00000487080 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
CHMP5-203ENST00000487080 PRKAR2AP13861 404 aaKnown RBP10.23□□□□□ -0.77
CHMP5-203ENST00000487080 CREBZFQ9NS37 354 aa10.2□□□□□ -0.78
CHMP5-203ENST00000487080 FBXO3Q9UK99 471 aa10.2□□□□□ -0.78
CHMP5-203ENST00000487080 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
CHMP5-203ENST00000487080 HAX1O00165 279 aa10.16□□□□□ -0.78
CHMP5-203ENST00000487080 EVX2Q03828 476 aa10.15□□□□□ -0.78
CHMP5-203ENST00000487080 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
CHMP5-203ENST00000487080 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
CHMP5-203ENST00000487080 MIER1Q8N108 512 aa10.06□□□□□ -0.8
CHMP5-203ENST00000487080 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
CHMP5-203ENST00000487080 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
CHMP5-203ENST00000487080 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
CHMP5-203ENST00000487080 PLCD3Q8N3E9 789 aa10.02□□□□□ -0.81
CHMP5-203ENST00000487080 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
CHMP5-203ENST00000487080 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
CHMP5-203ENST00000487080 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
CHMP5-203ENST00000487080 NUBP1P53384 320 aa9.9□□□□□ -0.82
CHMP5-203ENST00000487080 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
CHMP5-203ENST00000487080 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
CHMP5-203ENST00000487080 PAK3O75914 559 aaPredicted RBP9.85□□□□□ -0.83
CHMP5-203ENST00000487080 CLCN6P51797 869 aa9.85□□□□□ -0.83
CHMP5-203ENST00000487080 RASEFQ8IZ41 740 aa9.85□□□□□ -0.83
CHMP5-203ENST00000487080 GABBR2O75899 941 aa9.84□□□□□ -0.83
CHMP5-203ENST00000487080 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
CHMP5-203ENST00000487080 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
CHMP5-203ENST00000487080 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms