RNA–Protein interactions for RNA: ENST00000487036.1

FAM208A-208, Transcript of family with sequence similarity 208 member A, humanhuman

TSL 3

Gene FAM208A, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-208ENST00000487036 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
FAM208A-208ENST00000487036 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
FAM208A-208ENST00000487036 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
FAM208A-208ENST00000487036 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
FAM208A-208ENST00000487036 FOXD1Q16676 465 aa19.32■□□□□ 0.68
FAM208A-208ENST00000487036 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
FAM208A-208ENST00000487036 MSH5O43196 834 aa18.09■□□□□ 0.49
FAM208A-208ENST00000487036 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
FAM208A-208ENST00000487036 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
FAM208A-208ENST00000487036 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
FAM208A-208ENST00000487036 ADRA2BP18089 450 aa17.79■□□□□ 0.44
FAM208A-208ENST00000487036 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
FAM208A-208ENST00000487036 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
FAM208A-208ENST00000487036 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
FAM208A-208ENST00000487036 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
FAM208A-208ENST00000487036 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
FAM208A-208ENST00000487036 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
FAM208A-208ENST00000487036 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
FAM208A-208ENST00000487036 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
FAM208A-208ENST00000487036 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
FAM208A-208ENST00000487036 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
FAM208A-208ENST00000487036 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
FAM208A-208ENST00000487036 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
FAM208A-208ENST00000487036 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
FAM208A-208ENST00000487036 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
FAM208A-208ENST00000487036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
FAM208A-208ENST00000487036 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
FAM208A-208ENST00000487036 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
FAM208A-208ENST00000487036 DSG3P32926 999 aa14.41□□□□□ -0.1
FAM208A-208ENST00000487036 KCNA4P22459 653 aa14.37□□□□□ -0.11
FAM208A-208ENST00000487036 CAPN15O75808 1086 aa14.33□□□□□ -0.12
FAM208A-208ENST00000487036 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
FAM208A-208ENST00000487036 POTEHQ6S545 545 aa14.15□□□□□ -0.14
FAM208A-208ENST00000487036 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
FAM208A-208ENST00000487036 ABCB7O75027 752 aa14.01□□□□□ -0.17
FAM208A-208ENST00000487036 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
FAM208A-208ENST00000487036 APLP2Q06481 763 aa13.99□□□□□ -0.17
FAM208A-208ENST00000487036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
FAM208A-208ENST00000487036 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
FAM208A-208ENST00000487036 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
FAM208A-208ENST00000487036 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
FAM208A-208ENST00000487036 POLA2Q14181 598 aa13.67□□□□□ -0.22
FAM208A-208ENST00000487036 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
FAM208A-208ENST00000487036 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
FAM208A-208ENST00000487036 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
FAM208A-208ENST00000487036 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
FAM208A-208ENST00000487036 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
FAM208A-208ENST00000487036 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
FAM208A-208ENST00000487036 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
FAM208A-208ENST00000487036 ZBTB22O15209 634 aa13.27□□□□□ -0.29
FAM208A-208ENST00000487036 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
FAM208A-208ENST00000487036 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
FAM208A-208ENST00000487036 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
FAM208A-208ENST00000487036 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
FAM208A-208ENST00000487036 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
FAM208A-208ENST00000487036 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
FAM208A-208ENST00000487036 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
FAM208A-208ENST00000487036 HAX1O00165 279 aa12.92□□□□□ -0.34
FAM208A-208ENST00000487036 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
FAM208A-208ENST00000487036 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
FAM208A-208ENST00000487036 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
FAM208A-208ENST00000487036 EVX2Q03828 476 aa12.89□□□□□ -0.35
FAM208A-208ENST00000487036 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
FAM208A-208ENST00000487036 FBLN2P98095 1184 aa12.85□□□□□ -0.35
FAM208A-208ENST00000487036 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
FAM208A-208ENST00000487036 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
FAM208A-208ENST00000487036 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
FAM208A-208ENST00000487036 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
FAM208A-208ENST00000487036 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
FAM208A-208ENST00000487036 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
FAM208A-208ENST00000487036 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
FAM208A-208ENST00000487036 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
FAM208A-208ENST00000487036 GABBR2O75899 941 aa12.51□□□□□ -0.41
FAM208A-208ENST00000487036 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
FAM208A-208ENST00000487036 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
FAM208A-208ENST00000487036 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
FAM208A-208ENST00000487036 LHX8Q68G74 356 aa12.32□□□□□ -0.44
FAM208A-208ENST00000487036 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
FAM208A-208ENST00000487036 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
FAM208A-208ENST00000487036 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
FAM208A-208ENST00000487036 CLCN6P51797 869 aa12.18□□□□□ -0.46
FAM208A-208ENST00000487036 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
FAM208A-208ENST00000487036 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
FAM208A-208ENST00000487036 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
FAM208A-208ENST00000487036 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
FAM208A-208ENST00000487036 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
FAM208A-208ENST00000487036 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
FAM208A-208ENST00000487036 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
FAM208A-208ENST00000487036 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
FAM208A-208ENST00000487036 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
FAM208A-208ENST00000487036 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
FAM208A-208ENST00000487036 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
FAM208A-208ENST00000487036 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
FAM208A-208ENST00000487036 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
FAM208A-208ENST00000487036 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
FAM208A-208ENST00000487036 PROM2Q8N271 834 aa11.83□□□□□ -0.52
FAM208A-208ENST00000487036 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
FAM208A-208ENST00000487036 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
FAM208A-208ENST00000487036 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
FAM208A-208ENST00000487036 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms