RNA–Protein interactions for RNA: ENST00000486968.1

BCKDHB-205, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

TSL 3

Gene BCKDHB, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-205ENST00000486968 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
BCKDHB-205ENST00000486968 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
BCKDHB-205ENST00000486968 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
BCKDHB-205ENST00000486968 PHF23Q9BUL5 403 aaPredicted RBP24.12■■□□□ 1.45
BCKDHB-205ENST00000486968 FOXD1Q16676 465 aa22.54■■□□□ 1.2
BCKDHB-205ENST00000486968 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
BCKDHB-205ENST00000486968 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
BCKDHB-205ENST00000486968 ADRA2BP18089 450 aa21.32■■□□□ 1
BCKDHB-205ENST00000486968 PIAS4Q8N2W9 510 aaPredicted RBP21.13■□□□□ 0.97
BCKDHB-205ENST00000486968 MSH5O43196 834 aa20.92■□□□□ 0.94
BCKDHB-205ENST00000486968 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
BCKDHB-205ENST00000486968 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
BCKDHB-205ENST00000486968 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
BCKDHB-205ENST00000486968 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
BCKDHB-205ENST00000486968 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
BCKDHB-205ENST00000486968 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
BCKDHB-205ENST00000486968 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
BCKDHB-205ENST00000486968 KCNA4P22459 653 aa18.85■□□□□ 0.61
BCKDHB-205ENST00000486968 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
BCKDHB-205ENST00000486968 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
BCKDHB-205ENST00000486968 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
BCKDHB-205ENST00000486968 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
BCKDHB-205ENST00000486968 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
BCKDHB-205ENST00000486968 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
BCKDHB-205ENST00000486968 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
BCKDHB-205ENST00000486968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
BCKDHB-205ENST00000486968 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
BCKDHB-205ENST00000486968 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
BCKDHB-205ENST00000486968 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
BCKDHB-205ENST00000486968 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
BCKDHB-205ENST00000486968 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
BCKDHB-205ENST00000486968 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
BCKDHB-205ENST00000486968 ZBTB22O15209 634 aa17.33■□□□□ 0.36
BCKDHB-205ENST00000486968 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
BCKDHB-205ENST00000486968 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
BCKDHB-205ENST00000486968 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
BCKDHB-205ENST00000486968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
BCKDHB-205ENST00000486968 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
BCKDHB-205ENST00000486968 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
BCKDHB-205ENST00000486968 CAPN15O75808 1086 aa17.04■□□□□ 0.32
BCKDHB-205ENST00000486968 APLP2Q06481 763 aa17.03■□□□□ 0.32
BCKDHB-205ENST00000486968 DSG3P32926 999 aa16.9■□□□□ 0.3
BCKDHB-205ENST00000486968 ATXN8OSP0DMR3 200 aa16.89■□□□□ 0.29
BCKDHB-205ENST00000486968 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
BCKDHB-205ENST00000486968 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
BCKDHB-205ENST00000486968 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
BCKDHB-205ENST00000486968 ABCB7O75027 752 aa16.7■□□□□ 0.26
BCKDHB-205ENST00000486968 POLA2Q14181 598 aa16.52■□□□□ 0.24
BCKDHB-205ENST00000486968 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
BCKDHB-205ENST00000486968 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
BCKDHB-205ENST00000486968 FBLN2P98095 1184 aa16.04■□□□□ 0.16
BCKDHB-205ENST00000486968 OSCARQ8IYS5 282 aa16■□□□□ 0.15
BCKDHB-205ENST00000486968 MKRN4PQ13434 485 aaPredicted RBP15.98■□□□□ 0.15
BCKDHB-205ENST00000486968 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
BCKDHB-205ENST00000486968 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
BCKDHB-205ENST00000486968 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
BCKDHB-205ENST00000486968 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
BCKDHB-205ENST00000486968 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
BCKDHB-205ENST00000486968 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
BCKDHB-205ENST00000486968 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
BCKDHB-205ENST00000486968 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
BCKDHB-205ENST00000486968 CHRDL2Q6WN34 429 aa15.59■□□□□ 0.09
BCKDHB-205ENST00000486968 FKBP8Q14318 412 aa15.57■□□□□ 0.08
BCKDHB-205ENST00000486968 POTEHQ6S545 545 aa15.54■□□□□ 0.08
BCKDHB-205ENST00000486968 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
BCKDHB-205ENST00000486968 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
BCKDHB-205ENST00000486968 PROM2Q8N271 834 aa15.41■□□□□ 0.06
BCKDHB-205ENST00000486968 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
BCKDHB-205ENST00000486968 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
BCKDHB-205ENST00000486968 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
BCKDHB-205ENST00000486968 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
BCKDHB-205ENST00000486968 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
BCKDHB-205ENST00000486968 FBXO3Q9UK99 471 aa15.13■□□□□ 0.01
BCKDHB-205ENST00000486968 PRR29P0C7W0 189 aa15.12■□□□□ 0.01
BCKDHB-205ENST00000486968 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
BCKDHB-205ENST00000486968 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
BCKDHB-205ENST00000486968 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
BCKDHB-205ENST00000486968 HAX1O00165 279 aa14.86□□□□□ -0.03
BCKDHB-205ENST00000486968 VASPP50552 380 aaPredicted RBP14.86□□□□□ -0.03
BCKDHB-205ENST00000486968 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
BCKDHB-205ENST00000486968 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
BCKDHB-205ENST00000486968 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
BCKDHB-205ENST00000486968 MIER1Q8N108 512 aa14.8□□□□□ -0.04
BCKDHB-205ENST00000486968 EVX2Q03828 476 aa14.78□□□□□ -0.04
BCKDHB-205ENST00000486968 PLCD3Q8N3E9 789 aa14.78□□□□□ -0.04
BCKDHB-205ENST00000486968 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
BCKDHB-205ENST00000486968 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
BCKDHB-205ENST00000486968 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.05
BCKDHB-205ENST00000486968 IFNLR1Q8IU57 520 aaPredicted RBP14.63□□□□□ -0.07
BCKDHB-205ENST00000486968 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
BCKDHB-205ENST00000486968 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
BCKDHB-205ENST00000486968 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
BCKDHB-205ENST00000486968 SPOCK2Q92563 424 aa14.5□□□□□ -0.09
BCKDHB-205ENST00000486968 ZRANB1Q9UGI0 708 aa14.48□□□□□ -0.09
BCKDHB-205ENST00000486968 GABBR2O75899 941 aa14.46□□□□□ -0.09
BCKDHB-205ENST00000486968 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
BCKDHB-205ENST00000486968 NUBP1P53384 320 aa14.44□□□□□ -0.1
BCKDHB-205ENST00000486968 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
BCKDHB-205ENST00000486968 CLCN6P51797 869 aa14.37□□□□□ -0.11
BCKDHB-205ENST00000486968 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms