RNA–Protein interactions for RNA: ENST00000486947.5

TRDMT1-209, Transcript of tRNA aspartic acid methyltransferase 1, humanhuman

TSL 4

Gene TRDMT1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDMT1-209ENST00000486947 AEBP2Q6ZN18 517 aaPredicted RBP41.19■■■■■ 4.18
TRDMT1-209ENST00000486947 CHIC1Q5VXU3 224 aa39.13■■■■□ 3.85
TRDMT1-209ENST00000486947 SENP3Q9H4L4 574 aaPredicted RBP35.32■■■■□ 3.24
TRDMT1-209ENST00000486947 PHF23Q9BUL5 403 aaPredicted RBP34.78■■■■□ 3.16
TRDMT1-209ENST00000486947 FOXD1Q16676 465 aa32.82■■■□□ 2.84
TRDMT1-209ENST00000486947 PLPPR3Q6T4P5 718 aa31.29■■■□□ 2.6
TRDMT1-209ENST00000486947 MSH5O43196 834 aa30.89■■■□□ 2.54
TRDMT1-209ENST00000486947 PIAS4Q8N2W9 510 aaPredicted RBP30.7■■■□□ 2.51
TRDMT1-209ENST00000486947 PPP6R1Q9UPN7 881 aa30.56■■■□□ 2.48
TRDMT1-209ENST00000486947 ADRA2BP18089 450 aa30.49■■■□□ 2.47
TRDMT1-209ENST00000486947 POTEDQ86YR6 584 aa30.18■■■□□ 2.42
TRDMT1-209ENST00000486947 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
TRDMT1-209ENST00000486947 MAPK8IP2Q13387 824 aaPredicted RBP28■■■□□ 2.07
TRDMT1-209ENST00000486947 DMRT2Q9Y5R5 561 aa27.96■■■□□ 2.07
TRDMT1-209ENST00000486947 PPP4R3CPQ6ZMV5 832 aa27.37■■□□□ 1.97
TRDMT1-209ENST00000486947 CNKSR2Q8WXI2 1034 aa26.92■■□□□ 1.9
TRDMT1-209ENST00000486947 HOXD11P31277 338 aaPredicted RBP26.89■■□□□ 1.9
TRDMT1-209ENST00000486947 DCAF8L1A6NGE4 600 aa26.82■■□□□ 1.88
TRDMT1-209ENST00000486947 RNF216Q9NWF9 866 aaPredicted RBP26.7■■□□□ 1.86
TRDMT1-209ENST00000486947 CACNB1Q02641 598 aaPredicted RBP26.52■■□□□ 1.84
TRDMT1-209ENST00000486947 NCBP3Q53F19 620 aaKnown RBP26.4■■□□□ 1.82
TRDMT1-209ENST00000486947 RNF39Q9H2S5 420 aa26.27■■□□□ 1.8
TRDMT1-209ENST00000486947 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
TRDMT1-209ENST00000486947 C1QBPQ07021 282 aaKnown RBP25.96■■□□□ 1.75
TRDMT1-209ENST00000486947 NPM3O75607 178 aaKnown RBP25.87■■□□□ 1.73
TRDMT1-209ENST00000486947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.66■■□□□ 1.7
TRDMT1-209ENST00000486947 KCNA4P22459 653 aa25.26■■□□□ 1.63
TRDMT1-209ENST00000486947 U3KPZ7 1027 aaPredicted RBP25.02■■□□□ 1.6
TRDMT1-209ENST00000486947 CAPN15O75808 1086 aa24.72■■□□□ 1.55
TRDMT1-209ENST00000486947 SLC4A2P04920 1241 aa24.7■■□□□ 1.54
TRDMT1-209ENST00000486947 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
TRDMT1-209ENST00000486947 DSG3P32926 999 aa24.56■■□□□ 1.52
TRDMT1-209ENST00000486947 APLP2Q06481 763 aa24.55■■□□□ 1.52
TRDMT1-209ENST00000486947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
TRDMT1-209ENST00000486947 HNRNPUL2Q1KMD3 747 aaKnown RBP24.47■■□□□ 1.51
TRDMT1-209ENST00000486947 ZNF219Q9P2Y4 722 aaPredicted RBP24.31■■□□□ 1.48
TRDMT1-209ENST00000486947 TRHP20396 242 aaPredicted RBP24.28■■□□□ 1.48
TRDMT1-209ENST00000486947 SAMD1Q6SPF0 538 aaPredicted RBP24.28■■□□□ 1.48
TRDMT1-209ENST00000486947 ABCB7O75027 752 aa24.07■■□□□ 1.44
TRDMT1-209ENST00000486947 MYCNP04198 464 aaPredicted RBP24.02■■□□□ 1.44
TRDMT1-209ENST00000486947 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
TRDMT1-209ENST00000486947 FOXD4L1Q9NU39 408 aa23.69■■□□□ 1.38
TRDMT1-209ENST00000486947 POTEHQ6S545 545 aa23.67■■□□□ 1.38
TRDMT1-209ENST00000486947 POLA2Q14181 598 aa23.61■■□□□ 1.37
TRDMT1-209ENST00000486947 RBM42Q9BTD8 480 aaKnown RBP23.57■■□□□ 1.36
TRDMT1-209ENST00000486947 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
TRDMT1-209ENST00000486947 ZBTB12Q9Y330 459 aaPredicted RBP23.25■■□□□ 1.31
TRDMT1-209ENST00000486947 ZBTB22O15209 634 aa23.16■■□□□ 1.3
TRDMT1-209ENST00000486947 ATXN8OSP0DMR3 200 aa23.04■■□□□ 1.28
TRDMT1-209ENST00000486947 CHRDL2Q6WN34 429 aa22.99■■□□□ 1.27
TRDMT1-209ENST00000486947 AKT1S1Q96B36 256 aa22.96■■□□□ 1.27
TRDMT1-209ENST00000486947 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
TRDMT1-209ENST00000486947 REM2Q8IYK8 340 aaPredicted RBP22.68■■□□□ 1.22
TRDMT1-209ENST00000486947 FBLN2P98095 1184 aa22.61■■□□□ 1.21
TRDMT1-209ENST00000486947 SPDYE2BA6NHP3 402 aa22.47■■□□□ 1.19
TRDMT1-209ENST00000486947 SPDYE6P0CI01 402 aa22.47■■□□□ 1.19
TRDMT1-209ENST00000486947 SPDYE2Q495Y8 402 aa22.47■■□□□ 1.19
TRDMT1-209ENST00000486947 PITPNM1O00562 1244 aa22.41■■□□□ 1.18
TRDMT1-209ENST00000486947 PIP4P2Q8N4L2 257 aa22.39■■□□□ 1.17
TRDMT1-209ENST00000486947 FXR2P51116 673 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRDMT1-209ENST00000486947 MKRN4PQ13434 485 aaPredicted RBP22.26■■□□□ 1.15
TRDMT1-209ENST00000486947 SP7Q8TDD2 431 aaPredicted RBP22.17■■□□□ 1.14
TRDMT1-209ENST00000486947 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
TRDMT1-209ENST00000486947 SPDYE1Q8NFV5 336 aaPredicted RBP22.11■■□□□ 1.13
TRDMT1-209ENST00000486947 EHMT2Q96KQ7 1210 aa22.1■■□□□ 1.13
TRDMT1-209ENST00000486947 SSUH2Q9Y2M2 353 aa22.1■■□□□ 1.13
TRDMT1-209ENST00000486947 HAX1O00165 279 aa22.07■■□□□ 1.12
TRDMT1-209ENST00000486947 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
TRDMT1-209ENST00000486947 CLEC11AQ9Y240 323 aa22.02■■□□□ 1.12
TRDMT1-209ENST00000486947 PRKAR2AP13861 404 aaKnown RBP21.87■■□□□ 1.09
TRDMT1-209ENST00000486947 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
TRDMT1-209ENST00000486947 PRR29P0C7W0 189 aa21.68■■□□□ 1.06
TRDMT1-209ENST00000486947 EVX2Q03828 476 aa21.64■■□□□ 1.05
TRDMT1-209ENST00000486947 C19orf67A6NJJ6 358 aa21.56■■□□□ 1.04
TRDMT1-209ENST00000486947 CHADLQ6NUI6 762 aa21.53■■□□□ 1.04
TRDMT1-209ENST00000486947 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
TRDMT1-209ENST00000486947 FARP1Q9Y4F1 1045 aaPredicted RBP21.28■■□□□ 1
TRDMT1-209ENST00000486947 SPDYE4A6NLX3 237 aa21.26■□□□□ 0.99
TRDMT1-209ENST00000486947 GABBR2O75899 941 aa21.25■□□□□ 0.99
TRDMT1-209ENST00000486947 CD44P16070 742 aaKnown RBP21.18■□□□□ 0.98
TRDMT1-209ENST00000486947 CLCN6P51797 869 aa21.08■□□□□ 0.97
TRDMT1-209ENST00000486947 CREBZFQ9NS37 354 aa21.04■□□□□ 0.96
TRDMT1-209ENST00000486947 ZRANB1Q9UGI0 708 aa20.87■□□□□ 0.93
TRDMT1-209ENST00000486947 ZNF579Q8NAF0 562 aaKnown RBP20.86■□□□□ 0.93
TRDMT1-209ENST00000486947 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRDMT1-209ENST00000486947 LHX8Q68G74 356 aa20.79■□□□□ 0.92
TRDMT1-209ENST00000486947 PAK3O75914 559 aaPredicted RBP20.78■□□□□ 0.92
TRDMT1-209ENST00000486947 DCBLD2Q96PD2 775 aa20.74■□□□□ 0.91
TRDMT1-209ENST00000486947 POTEIP0CG38 1075 aa20.72■□□□□ 0.91
TRDMT1-209ENST00000486947 PROM2Q8N271 834 aa20.7■□□□□ 0.9
TRDMT1-209ENST00000486947 MNX1P50219 401 aaPredicted RBP20.64■□□□□ 0.89
TRDMT1-209ENST00000486947 GALR2O43603 387 aaPredicted RBP20.54■□□□□ 0.88
TRDMT1-209ENST00000486947 PHF12Q96QT6 1004 aa20.5■□□□□ 0.87
TRDMT1-209ENST00000486947 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
TRDMT1-209ENST00000486947 MIER1Q8N108 512 aa20.33■□□□□ 0.85
TRDMT1-209ENST00000486947 TSPYL2Q9H2G4 693 aaPredicted RBP20.3■□□□□ 0.84
TRDMT1-209ENST00000486947 MS4A3Q96HJ5 214 aa20.24■□□□□ 0.83
TRDMT1-209ENST00000486947 CCDC61Q9Y6R9 512 aa20.21■□□□□ 0.83
TRDMT1-209ENST00000486947 ASTLQ6HA08 431 aaPredicted RBP20.16■□□□□ 0.82
TRDMT1-209ENST00000486947 PLCD3Q8N3E9 789 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms