RNA–Protein interactions for RNA: ENST00000486881.1

CHL1-214, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 555 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-214ENST00000486881 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
CHL1-214ENST00000486881 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
CHL1-214ENST00000486881 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
CHL1-214ENST00000486881 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
CHL1-214ENST00000486881 FOXD1Q16676 465 aa20.3■□□□□ 0.84
CHL1-214ENST00000486881 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
CHL1-214ENST00000486881 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
CHL1-214ENST00000486881 ADRA2BP18089 450 aa19.01■□□□□ 0.63
CHL1-214ENST00000486881 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
CHL1-214ENST00000486881 MSH5O43196 834 aa18.97■□□□□ 0.63
CHL1-214ENST00000486881 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
CHL1-214ENST00000486881 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
CHL1-214ENST00000486881 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CHL1-214ENST00000486881 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
CHL1-214ENST00000486881 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
CHL1-214ENST00000486881 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
CHL1-214ENST00000486881 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
CHL1-214ENST00000486881 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
CHL1-214ENST00000486881 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
CHL1-214ENST00000486881 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
CHL1-214ENST00000486881 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
CHL1-214ENST00000486881 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
CHL1-214ENST00000486881 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
CHL1-214ENST00000486881 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
CHL1-214ENST00000486881 KCNA4P22459 653 aa16■□□□□ 0.15
CHL1-214ENST00000486881 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
CHL1-214ENST00000486881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHL1-214ENST00000486881 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
CHL1-214ENST00000486881 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
CHL1-214ENST00000486881 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
CHL1-214ENST00000486881 CAPN15O75808 1086 aa15.33■□□□□ 0.04
CHL1-214ENST00000486881 DSG3P32926 999 aa15.19■□□□□ 0.02
CHL1-214ENST00000486881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
CHL1-214ENST00000486881 APLP2Q06481 763 aa15.18■□□□□ 0.02
CHL1-214ENST00000486881 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
CHL1-214ENST00000486881 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
CHL1-214ENST00000486881 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
CHL1-214ENST00000486881 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
CHL1-214ENST00000486881 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
CHL1-214ENST00000486881 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
CHL1-214ENST00000486881 ABCB7O75027 752 aa14.98□□□□□ -0.01
CHL1-214ENST00000486881 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
CHL1-214ENST00000486881 POLA2Q14181 598 aa14.72□□□□□ -0.05
CHL1-214ENST00000486881 ZBTB22O15209 634 aa14.69□□□□□ -0.06
CHL1-214ENST00000486881 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
CHL1-214ENST00000486881 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
CHL1-214ENST00000486881 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
CHL1-214ENST00000486881 POTEHQ6S545 545 aa14.42□□□□□ -0.1
CHL1-214ENST00000486881 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
CHL1-214ENST00000486881 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
CHL1-214ENST00000486881 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
CHL1-214ENST00000486881 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
CHL1-214ENST00000486881 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
CHL1-214ENST00000486881 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
CHL1-214ENST00000486881 FBLN2P98095 1184 aa14.11□□□□□ -0.15
CHL1-214ENST00000486881 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
CHL1-214ENST00000486881 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
CHL1-214ENST00000486881 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
CHL1-214ENST00000486881 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
CHL1-214ENST00000486881 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
CHL1-214ENST00000486881 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
CHL1-214ENST00000486881 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
CHL1-214ENST00000486881 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
CHL1-214ENST00000486881 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
CHL1-214ENST00000486881 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHL1-214ENST00000486881 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
CHL1-214ENST00000486881 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
CHL1-214ENST00000486881 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHL1-214ENST00000486881 HAX1O00165 279 aa13.6□□□□□ -0.23
CHL1-214ENST00000486881 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
CHL1-214ENST00000486881 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
CHL1-214ENST00000486881 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
CHL1-214ENST00000486881 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
CHL1-214ENST00000486881 EVX2Q03828 476 aa13.4□□□□□ -0.26
CHL1-214ENST00000486881 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
CHL1-214ENST00000486881 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
CHL1-214ENST00000486881 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
CHL1-214ENST00000486881 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
CHL1-214ENST00000486881 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
CHL1-214ENST00000486881 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
CHL1-214ENST00000486881 GABBR2O75899 941 aa13.11□□□□□ -0.31
CHL1-214ENST00000486881 PROM2Q8N271 834 aa13.03□□□□□ -0.32
CHL1-214ENST00000486881 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
CHL1-214ENST00000486881 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHL1-214ENST00000486881 CLCN6P51797 869 aa12.94□□□□□ -0.34
CHL1-214ENST00000486881 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
CHL1-214ENST00000486881 FKBP8Q14318 412 aa12.91□□□□□ -0.34
CHL1-214ENST00000486881 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
CHL1-214ENST00000486881 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
CHL1-214ENST00000486881 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
CHL1-214ENST00000486881 MIER1Q8N108 512 aa12.8□□□□□ -0.36
CHL1-214ENST00000486881 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
CHL1-214ENST00000486881 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
CHL1-214ENST00000486881 PHF12Q96QT6 1004 aa12.78□□□□□ -0.36
CHL1-214ENST00000486881 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
CHL1-214ENST00000486881 LHX8Q68G74 356 aa12.74□□□□□ -0.37
CHL1-214ENST00000486881 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
CHL1-214ENST00000486881 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
CHL1-214ENST00000486881 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
CHL1-214ENST00000486881 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms