RNA–Protein interactions for RNA: ENST00000486688.1

IFRD1-214, Transcript of interferon related developmental regulator 1, humanhuman

TSL 4

Gene IFRD1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-214ENST00000486688 AEBP2Q6ZN18 517 aaPredicted RBP28.15■■■□□ 2.1
IFRD1-214ENST00000486688 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
IFRD1-214ENST00000486688 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
IFRD1-214ENST00000486688 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
IFRD1-214ENST00000486688 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
IFRD1-214ENST00000486688 FOXD1Q16676 465 aa22.13■■□□□ 1.13
IFRD1-214ENST00000486688 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
IFRD1-214ENST00000486688 ADRA2BP18089 450 aa21.28■■□□□ 1
IFRD1-214ENST00000486688 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
IFRD1-214ENST00000486688 MSH5O43196 834 aa20.31■□□□□ 0.84
IFRD1-214ENST00000486688 PPP4R3CPQ6ZMV5 832 aa19.61■□□□□ 0.73
IFRD1-214ENST00000486688 SCAF1Q9H7N4 1312 aaKnown RBP19.33■□□□□ 0.69
IFRD1-214ENST00000486688 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
IFRD1-214ENST00000486688 KCNA4P22459 653 aa19.19■□□□□ 0.66
IFRD1-214ENST00000486688 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
IFRD1-214ENST00000486688 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
IFRD1-214ENST00000486688 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
IFRD1-214ENST00000486688 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
IFRD1-214ENST00000486688 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
IFRD1-214ENST00000486688 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
IFRD1-214ENST00000486688 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
IFRD1-214ENST00000486688 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
IFRD1-214ENST00000486688 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
IFRD1-214ENST00000486688 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
IFRD1-214ENST00000486688 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
IFRD1-214ENST00000486688 ZBTB22O15209 634 aa17.71■□□□□ 0.43
IFRD1-214ENST00000486688 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
IFRD1-214ENST00000486688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.422e-9■■■■□ 21.9
IFRD1-214ENST00000486688 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
IFRD1-214ENST00000486688 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
IFRD1-214ENST00000486688 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
IFRD1-214ENST00000486688 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
IFRD1-214ENST00000486688 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
IFRD1-214ENST00000486688 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
IFRD1-214ENST00000486688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
IFRD1-214ENST00000486688 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
IFRD1-214ENST00000486688 SAMD1Q6SPF0 538 aaPredicted RBP17.1■□□□□ 0.33
IFRD1-214ENST00000486688 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
IFRD1-214ENST00000486688 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
IFRD1-214ENST00000486688 ATXN8OSP0DMR3 200 aa16.97■□□□□ 0.31
IFRD1-214ENST00000486688 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
IFRD1-214ENST00000486688 APLP2Q06481 763 aa16.91■□□□□ 0.3
IFRD1-214ENST00000486688 CAPN15O75808 1086 aa16.84■□□□□ 0.29
IFRD1-214ENST00000486688 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
IFRD1-214ENST00000486688 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
IFRD1-214ENST00000486688 DSG3P32926 999 aa16.63■□□□□ 0.25
IFRD1-214ENST00000486688 ABCB7O75027 752 aa16.57■□□□□ 0.24
IFRD1-214ENST00000486688 POLA2Q14181 598 aa16.52■□□□□ 0.24
IFRD1-214ENST00000486688 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
IFRD1-214ENST00000486688 ZBTB12Q9Y330 459 aaPredicted RBP16.17■□□□□ 0.18
IFRD1-214ENST00000486688 FBLN2P98095 1184 aa16.12■□□□□ 0.17
IFRD1-214ENST00000486688 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
IFRD1-214ENST00000486688 FKBP8Q14318 412 aa15.82■□□□□ 0.12
IFRD1-214ENST00000486688 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
IFRD1-214ENST00000486688 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
IFRD1-214ENST00000486688 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
IFRD1-214ENST00000486688 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
IFRD1-214ENST00000486688 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
IFRD1-214ENST00000486688 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
IFRD1-214ENST00000486688 SSUH2Q9Y2M2 353 aa15.72■□□□□ 0.11
IFRD1-214ENST00000486688 PROM2Q8N271 834 aa15.6■□□□□ 0.09
IFRD1-214ENST00000486688 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
IFRD1-214ENST00000486688 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
IFRD1-214ENST00000486688 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
IFRD1-214ENST00000486688 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
IFRD1-214ENST00000486688 SPDYE1Q8NFV5 336 aaPredicted RBP15.31■□□□□ 0.04
IFRD1-214ENST00000486688 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
IFRD1-214ENST00000486688 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
IFRD1-214ENST00000486688 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
IFRD1-214ENST00000486688 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
IFRD1-214ENST00000486688 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
IFRD1-214ENST00000486688 VASPP50552 380 aaPredicted RBP15.05■□□□□ -0
IFRD1-214ENST00000486688 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
IFRD1-214ENST00000486688 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
IFRD1-214ENST00000486688 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
IFRD1-214ENST00000486688 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
IFRD1-214ENST00000486688 MIER1Q8N108 512 aa14.94□□□□□ -0.02
IFRD1-214ENST00000486688 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
IFRD1-214ENST00000486688 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
IFRD1-214ENST00000486688 IFNLR1Q8IU57 520 aaPredicted RBP14.89□□□□□ -0.03
IFRD1-214ENST00000486688 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
IFRD1-214ENST00000486688 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
IFRD1-214ENST00000486688 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.05
IFRD1-214ENST00000486688 KLHL34Q8N239 644 aa14.72□□□□□ -0.05
IFRD1-214ENST00000486688 ZBTB47Q9UFB7 747 aaPredicted RBP14.7□□□□□ -0.06
IFRD1-214ENST00000486688 POTEHQ6S545 545 aa14.68□□□□□ -0.06
IFRD1-214ENST00000486688 NUBP1P53384 320 aa14.64□□□□□ -0.07
IFRD1-214ENST00000486688 SPOCK2Q92563 424 aa14.64□□□□□ -0.07
IFRD1-214ENST00000486688 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
IFRD1-214ENST00000486688 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
IFRD1-214ENST00000486688 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
IFRD1-214ENST00000486688 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
IFRD1-214ENST00000486688 HAX1O00165 279 aa14.45□□□□□ -0.1
IFRD1-214ENST00000486688 EVX2Q03828 476 aa14.45□□□□□ -0.1
IFRD1-214ENST00000486688 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
IFRD1-214ENST00000486688 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
IFRD1-214ENST00000486688 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
IFRD1-214ENST00000486688 RTN4Q9NQC3 1192 aaKnown RBP14.41□□□□□ -0.1
IFRD1-214ENST00000486688 PKD2Q13563 968 aa14.4□□□□□ -0.1
IFRD1-214ENST00000486688 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms