RNA–Protein interactions for RNA: ENST00000486621.1

TTC4-204, Transcript of tetratricopeptide repeat domain 4, humanhuman

TSL 2

Gene TTC4, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4-204ENST00000486621 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
TTC4-204ENST00000486621 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
TTC4-204ENST00000486621 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
TTC4-204ENST00000486621 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
TTC4-204ENST00000486621 FOXD1Q16676 465 aa19.91■□□□□ 0.78
TTC4-204ENST00000486621 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
TTC4-204ENST00000486621 MSH5O43196 834 aa18.8■□□□□ 0.6
TTC4-204ENST00000486621 PIAS4Q8N2W9 510 aaPredicted RBP18.52■□□□□ 0.56
TTC4-204ENST00000486621 PLPPR3Q6T4P5 718 aa18.46■□□□□ 0.55
TTC4-204ENST00000486621 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
TTC4-204ENST00000486621 ADRA2BP18089 450 aa18.23■□□□□ 0.51
TTC4-204ENST00000486621 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
TTC4-204ENST00000486621 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
TTC4-204ENST00000486621 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
TTC4-204ENST00000486621 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
TTC4-204ENST00000486621 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
TTC4-204ENST00000486621 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
TTC4-204ENST00000486621 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
TTC4-204ENST00000486621 RNF39Q9H2S5 420 aa16■□□□□ 0.15
TTC4-204ENST00000486621 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
TTC4-204ENST00000486621 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
TTC4-204ENST00000486621 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
TTC4-204ENST00000486621 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
TTC4-204ENST00000486621 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
TTC4-204ENST00000486621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
TTC4-204ENST00000486621 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
TTC4-204ENST00000486621 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
TTC4-204ENST00000486621 DSG3P32926 999 aa14.85□□□□□ -0.03
TTC4-204ENST00000486621 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
TTC4-204ENST00000486621 CAPN15O75808 1086 aa14.83□□□□□ -0.04
TTC4-204ENST00000486621 POTEHQ6S545 545 aa14.79□□□□□ -0.04
TTC4-204ENST00000486621 SLC4A2P04920 1241 aa14.58□□□□□ -0.08
TTC4-204ENST00000486621 KCNA4P22459 653 aa14.54□□□□□ -0.08
TTC4-204ENST00000486621 APLP2Q06481 763 aa14.52□□□□□ -0.09
TTC4-204ENST00000486621 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
TTC4-204ENST00000486621 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
TTC4-204ENST00000486621 ABCB7O75027 752 aa14.46□□□□□ -0.09
TTC4-204ENST00000486621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
TTC4-204ENST00000486621 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
TTC4-204ENST00000486621 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
TTC4-204ENST00000486621 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
TTC4-204ENST00000486621 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
TTC4-204ENST00000486621 POLA2Q14181 598 aa14.04□□□□□ -0.16
TTC4-204ENST00000486621 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
TTC4-204ENST00000486621 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
TTC4-204ENST00000486621 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
TTC4-204ENST00000486621 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
TTC4-204ENST00000486621 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
TTC4-204ENST00000486621 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
TTC4-204ENST00000486621 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
TTC4-204ENST00000486621 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
TTC4-204ENST00000486621 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
TTC4-204ENST00000486621 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
TTC4-204ENST00000486621 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
TTC4-204ENST00000486621 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
TTC4-204ENST00000486621 HAX1O00165 279 aa13.45□□□□□ -0.26
TTC4-204ENST00000486621 ZBTB22O15209 634 aa13.36□□□□□ -0.27
TTC4-204ENST00000486621 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
TTC4-204ENST00000486621 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
TTC4-204ENST00000486621 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
TTC4-204ENST00000486621 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
TTC4-204ENST00000486621 EVX2Q03828 476 aa13.25□□□□□ -0.29
TTC4-204ENST00000486621 FBLN2P98095 1184 aa13.24□□□□□ -0.29
TTC4-204ENST00000486621 PRKAR2AP13861 404 aaKnown RBP13.15□□□□□ -0.3
TTC4-204ENST00000486621 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
TTC4-204ENST00000486621 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
TTC4-204ENST00000486621 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
TTC4-204ENST00000486621 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
TTC4-204ENST00000486621 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
TTC4-204ENST00000486621 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
TTC4-204ENST00000486621 GABBR2O75899 941 aa12.94□□□□□ -0.34
TTC4-204ENST00000486621 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
TTC4-204ENST00000486621 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
TTC4-204ENST00000486621 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
TTC4-204ENST00000486621 LHX8Q68G74 356 aa12.83□□□□□ -0.36
TTC4-204ENST00000486621 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
TTC4-204ENST00000486621 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
TTC4-204ENST00000486621 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
TTC4-204ENST00000486621 CLCN6P51797 869 aa12.64□□□□□ -0.39
TTC4-204ENST00000486621 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
TTC4-204ENST00000486621 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
TTC4-204ENST00000486621 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
TTC4-204ENST00000486621 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
TTC4-204ENST00000486621 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
TTC4-204ENST00000486621 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
TTC4-204ENST00000486621 GALR2O43603 387 aaPredicted RBP12.37□□□□□ -0.43
TTC4-204ENST00000486621 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
TTC4-204ENST00000486621 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
TTC4-204ENST00000486621 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
TTC4-204ENST00000486621 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
TTC4-204ENST00000486621 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
TTC4-204ENST00000486621 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
TTC4-204ENST00000486621 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
TTC4-204ENST00000486621 MNX1P50219 401 aaPredicted RBP12.2□□□□□ -0.46
TTC4-204ENST00000486621 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
TTC4-204ENST00000486621 POTEMA6NI47 508 aa12.1□□□□□ -0.47
TTC4-204ENST00000486621 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
TTC4-204ENST00000486621 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
TTC4-204ENST00000486621 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
TTC4-204ENST00000486621 ATMINO43313 823 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms