RNA–Protein interactions for RNA: ENST00000486540.1

KDELC1-204, Transcript of KDEL motif containing 1, humanhuman

TSL 3

Gene KDELC1, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELC1-204ENST00000486540 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
KDELC1-204ENST00000486540 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
KDELC1-204ENST00000486540 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
KDELC1-204ENST00000486540 PHF23Q9BUL5 403 aaPredicted RBP26.47■■□□□ 1.83
KDELC1-204ENST00000486540 FOXD1Q16676 465 aa25■■□□□ 1.59
KDELC1-204ENST00000486540 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
KDELC1-204ENST00000486540 MSH5O43196 834 aa23.54■■□□□ 1.36
KDELC1-204ENST00000486540 PIAS4Q8N2W9 510 aaPredicted RBP23.39■■□□□ 1.33
KDELC1-204ENST00000486540 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
KDELC1-204ENST00000486540 ADRA2BP18089 450 aa23.18■■□□□ 1.3
KDELC1-204ENST00000486540 POTEDQ86YR6 584 aa23.1■■□□□ 1.29
KDELC1-204ENST00000486540 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
KDELC1-204ENST00000486540 MAPK8IP2Q13387 824 aaPredicted RBP21.3■■□□□ 1
KDELC1-204ENST00000486540 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
KDELC1-204ENST00000486540 PPP4R3CPQ6ZMV5 832 aa20.77■□□□□ 0.92
KDELC1-204ENST00000486540 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
KDELC1-204ENST00000486540 CNKSR2Q8WXI2 1034 aa20.44■□□□□ 0.86
KDELC1-204ENST00000486540 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
KDELC1-204ENST00000486540 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
KDELC1-204ENST00000486540 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
KDELC1-204ENST00000486540 RNF39Q9H2S5 420 aa20.03■□□□□ 0.8
KDELC1-204ENST00000486540 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
KDELC1-204ENST00000486540 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
KDELC1-204ENST00000486540 C1QBPQ07021 282 aaKnown RBP19.77■□□□□ 0.76
KDELC1-204ENST00000486540 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
KDELC1-204ENST00000486540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
KDELC1-204ENST00000486540 KCNA4P22459 653 aa19.14■□□□□ 0.65
KDELC1-204ENST00000486540 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
KDELC1-204ENST00000486540 CAPN15O75808 1086 aa18.81■□□□□ 0.6
KDELC1-204ENST00000486540 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
KDELC1-204ENST00000486540 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
KDELC1-204ENST00000486540 DSG3P32926 999 aa18.7■□□□□ 0.58
KDELC1-204ENST00000486540 APLP2Q06481 763 aa18.64■□□□□ 0.57
KDELC1-204ENST00000486540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
KDELC1-204ENST00000486540 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
KDELC1-204ENST00000486540 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
KDELC1-204ENST00000486540 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
KDELC1-204ENST00000486540 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
KDELC1-204ENST00000486540 ABCB7O75027 752 aa18.33■□□□□ 0.52
KDELC1-204ENST00000486540 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
KDELC1-204ENST00000486540 POTEHQ6S545 545 aa18.11■□□□□ 0.49
KDELC1-204ENST00000486540 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
KDELC1-204ENST00000486540 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
KDELC1-204ENST00000486540 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
KDELC1-204ENST00000486540 POLA2Q14181 598 aa17.94■□□□□ 0.46
KDELC1-204ENST00000486540 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
KDELC1-204ENST00000486540 ZBTB12Q9Y330 459 aaPredicted RBP17.67■□□□□ 0.42
KDELC1-204ENST00000486540 ZBTB22O15209 634 aa17.56■□□□□ 0.4
KDELC1-204ENST00000486540 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
KDELC1-204ENST00000486540 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
KDELC1-204ENST00000486540 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
KDELC1-204ENST00000486540 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
KDELC1-204ENST00000486540 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
KDELC1-204ENST00000486540 FBLN2P98095 1184 aa17.15■□□□□ 0.34
KDELC1-204ENST00000486540 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
KDELC1-204ENST00000486540 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
KDELC1-204ENST00000486540 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
KDELC1-204ENST00000486540 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
KDELC1-204ENST00000486540 PIP4P2Q8N4L2 257 aa17.06■□□□□ 0.32
KDELC1-204ENST00000486540 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
KDELC1-204ENST00000486540 SP7Q8TDD2 431 aaPredicted RBP16.93■□□□□ 0.3
KDELC1-204ENST00000486540 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
KDELC1-204ENST00000486540 HAX1O00165 279 aa16.82■□□□□ 0.28
KDELC1-204ENST00000486540 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
KDELC1-204ENST00000486540 SPDYE1Q8NFV5 336 aaPredicted RBP16.8■□□□□ 0.28
KDELC1-204ENST00000486540 SSUH2Q9Y2M2 353 aa16.79■□□□□ 0.28
KDELC1-204ENST00000486540 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
KDELC1-204ENST00000486540 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
KDELC1-204ENST00000486540 PRKAR2AP13861 404 aaKnown RBP16.65■□□□□ 0.26
KDELC1-204ENST00000486540 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
KDELC1-204ENST00000486540 EVX2Q03828 476 aa16.5■□□□□ 0.23
KDELC1-204ENST00000486540 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
KDELC1-204ENST00000486540 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
KDELC1-204ENST00000486540 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
KDELC1-204ENST00000486540 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
KDELC1-204ENST00000486540 GABBR2O75899 941 aa16.19■□□□□ 0.18
KDELC1-204ENST00000486540 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
KDELC1-204ENST00000486540 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
KDELC1-204ENST00000486540 CD44P16070 742 aaKnown RBP16.12■□□□□ 0.17
KDELC1-204ENST00000486540 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
KDELC1-204ENST00000486540 CLCN6P51797 869 aa16.01■□□□□ 0.15
KDELC1-204ENST00000486540 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
KDELC1-204ENST00000486540 ZNF579Q8NAF0 562 aaKnown RBP15.87■□□□□ 0.13
KDELC1-204ENST00000486540 ZRANB1Q9UGI0 708 aa15.87■□□□□ 0.13
KDELC1-204ENST00000486540 LHX8Q68G74 356 aa15.86■□□□□ 0.13
KDELC1-204ENST00000486540 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
KDELC1-204ENST00000486540 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
KDELC1-204ENST00000486540 DCBLD2Q96PD2 775 aa15.79■□□□□ 0.12
KDELC1-204ENST00000486540 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
KDELC1-204ENST00000486540 MNX1P50219 401 aaPredicted RBP15.68■□□□□ 0.1
KDELC1-204ENST00000486540 PROM2Q8N271 834 aa15.68■□□□□ 0.1
KDELC1-204ENST00000486540 GALR2O43603 387 aaPredicted RBP15.64■□□□□ 0.09
KDELC1-204ENST00000486540 PHF12Q96QT6 1004 aa15.6■□□□□ 0.09
KDELC1-204ENST00000486540 PLEKHG5O94827 1062 aa15.48■□□□□ 0.07
KDELC1-204ENST00000486540 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
KDELC1-204ENST00000486540 MS4A3Q96HJ5 214 aa15.41■□□□□ 0.06
KDELC1-204ENST00000486540 MIER1Q8N108 512 aa15.39■□□□□ 0.05
KDELC1-204ENST00000486540 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
KDELC1-204ENST00000486540 ASTLQ6HA08 431 aaPredicted RBP15.34■□□□□ 0.05
KDELC1-204ENST00000486540 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms