RNA–Protein interactions for RNA: ENST00000486458.1

STAMBP-209, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-209ENST00000486458 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
STAMBP-209ENST00000486458 CHIC1Q5VXU3 224 aa31.42■■■□□ 2.62
STAMBP-209ENST00000486458 SENP3Q9H4L4 574 aaPredicted RBP27.95■■■□□ 2.06
STAMBP-209ENST00000486458 PHF23Q9BUL5 403 aaPredicted RBP27.63■■■□□ 2.01
STAMBP-209ENST00000486458 FOXD1Q16676 465 aa26.03■■□□□ 1.76
STAMBP-209ENST00000486458 PLPPR3Q6T4P5 718 aa25.2■■□□□ 1.62
STAMBP-209ENST00000486458 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
STAMBP-209ENST00000486458 ADRA2BP18089 450 aa24.44■■□□□ 1.5
STAMBP-209ENST00000486458 PIAS4Q8N2W9 510 aaPredicted RBP24.34■■□□□ 1.49
STAMBP-209ENST00000486458 MSH5O43196 834 aa24.26■■□□□ 1.47
STAMBP-209ENST00000486458 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
STAMBP-209ENST00000486458 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
STAMBP-209ENST00000486458 MAPK8IP2Q13387 824 aaPredicted RBP22.38■■□□□ 1.17
STAMBP-209ENST00000486458 DMRT2Q9Y5R5 561 aa22.22■■□□□ 1.15
STAMBP-209ENST00000486458 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
STAMBP-209ENST00000486458 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
STAMBP-209ENST00000486458 HOXD11P31277 338 aaPredicted RBP21.52■■□□□ 1.04
STAMBP-209ENST00000486458 RNF216Q9NWF9 866 aaPredicted RBP21.41■■□□□ 1.02
STAMBP-209ENST00000486458 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
STAMBP-209ENST00000486458 DCAF8L1A6NGE4 600 aa21.2■□□□□ 0.98
STAMBP-209ENST00000486458 NPM3O75607 178 aaKnown RBP21.04■□□□□ 0.96
STAMBP-209ENST00000486458 KCNA4P22459 653 aa20.84■□□□□ 0.93
STAMBP-209ENST00000486458 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
STAMBP-209ENST00000486458 RNF39Q9H2S5 420 aa20.74■□□□□ 0.91
STAMBP-209ENST00000486458 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
STAMBP-209ENST00000486458 C1QBPQ07021 282 aaKnown RBP20.45■□□□□ 0.86
STAMBP-209ENST00000486458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
STAMBP-209ENST00000486458 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
STAMBP-209ENST00000486458 SLC4A2P04920 1241 aa20.05■□□□□ 0.8
STAMBP-209ENST00000486458 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
STAMBP-209ENST00000486458 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
STAMBP-209ENST00000486458 CAPN15O75808 1086 aa19.61■□□□□ 0.73
STAMBP-209ENST00000486458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
STAMBP-209ENST00000486458 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
STAMBP-209ENST00000486458 APLP2Q06481 763 aa19.53■□□□□ 0.72
STAMBP-209ENST00000486458 DSG3P32926 999 aa19.5■□□□□ 0.71
STAMBP-209ENST00000486458 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
STAMBP-209ENST00000486458 MYCNP04198 464 aaPredicted RBP19.45■□□□□ 0.7
STAMBP-209ENST00000486458 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
STAMBP-209ENST00000486458 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
STAMBP-209ENST00000486458 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
STAMBP-209ENST00000486458 ZBTB22O15209 634 aa19.18■□□□□ 0.66
STAMBP-209ENST00000486458 ABCB7O75027 752 aa19.17■□□□□ 0.66
STAMBP-209ENST00000486458 ATF5Q9Y2D1 282 aaPredicted RBP18.98■□□□□ 0.63
STAMBP-209ENST00000486458 POLA2Q14181 598 aa18.92■□□□□ 0.62
STAMBP-209ENST00000486458 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
STAMBP-209ENST00000486458 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
STAMBP-209ENST00000486458 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
STAMBP-209ENST00000486458 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
STAMBP-209ENST00000486458 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
STAMBP-209ENST00000486458 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
STAMBP-209ENST00000486458 POTEHQ6S545 545 aa18.26■□□□□ 0.51
STAMBP-209ENST00000486458 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
STAMBP-209ENST00000486458 FBLN2P98095 1184 aa18.2■□□□□ 0.5
STAMBP-209ENST00000486458 MKRN4PQ13434 485 aaPredicted RBP18.14■□□□□ 0.49
STAMBP-209ENST00000486458 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
STAMBP-209ENST00000486458 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
STAMBP-209ENST00000486458 SPDYE2BA6NHP3 402 aa18.03■□□□□ 0.48
STAMBP-209ENST00000486458 SPDYE6P0CI01 402 aa18.03■□□□□ 0.48
STAMBP-209ENST00000486458 SPDYE2Q495Y8 402 aa18.03■□□□□ 0.48
STAMBP-209ENST00000486458 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
STAMBP-209ENST00000486458 SSUH2Q9Y2M2 353 aa17.83■□□□□ 0.44
STAMBP-209ENST00000486458 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
STAMBP-209ENST00000486458 PIP4P2Q8N4L2 257 aa17.7■□□□□ 0.42
STAMBP-209ENST00000486458 FXR2P51116 673 aaKnown RBP eCLIP17.66■□□□□ 0.42
STAMBP-209ENST00000486458 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
STAMBP-209ENST00000486458 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
STAMBP-209ENST00000486458 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
STAMBP-209ENST00000486458 SPDYE4A6NLX3 237 aa17.38■□□□□ 0.37
STAMBP-209ENST00000486458 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
STAMBP-209ENST00000486458 PRR29P0C7W0 189 aa17.32■□□□□ 0.36
STAMBP-209ENST00000486458 HAX1O00165 279 aa17.28■□□□□ 0.36
STAMBP-209ENST00000486458 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
STAMBP-209ENST00000486458 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
STAMBP-209ENST00000486458 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
STAMBP-209ENST00000486458 EVX2Q03828 476 aa17.12■□□□□ 0.33
STAMBP-209ENST00000486458 C19orf67A6NJJ6 358 aa17.09■□□□□ 0.33
STAMBP-209ENST00000486458 PROM2Q8N271 834 aa17.07■□□□□ 0.32
STAMBP-209ENST00000486458 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
STAMBP-209ENST00000486458 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
STAMBP-209ENST00000486458 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
STAMBP-209ENST00000486458 MNX1P50219 401 aaPredicted RBP16.76■□□□□ 0.27
STAMBP-209ENST00000486458 GABBR2O75899 941 aa16.75■□□□□ 0.27
STAMBP-209ENST00000486458 FKBP8Q14318 412 aa16.74■□□□□ 0.27
STAMBP-209ENST00000486458 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
STAMBP-209ENST00000486458 CLCN6P51797 869 aa16.62■□□□□ 0.25
STAMBP-209ENST00000486458 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
STAMBP-209ENST00000486458 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
STAMBP-209ENST00000486458 MIER1Q8N108 512 aa16.54■□□□□ 0.24
STAMBP-209ENST00000486458 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
STAMBP-209ENST00000486458 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
STAMBP-209ENST00000486458 PLCD3Q8N3E9 789 aa16.42■□□□□ 0.22
STAMBP-209ENST00000486458 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
STAMBP-209ENST00000486458 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
STAMBP-209ENST00000486458 GALR2O43603 387 aaPredicted RBP16.36■□□□□ 0.21
STAMBP-209ENST00000486458 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
STAMBP-209ENST00000486458 TSPYL2Q9H2G4 693 aaPredicted RBP16.34■□□□□ 0.21
STAMBP-209ENST00000486458 DCBLD2Q96PD2 775 aa16.32■□□□□ 0.2
STAMBP-209ENST00000486458 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
STAMBP-209ENST00000486458 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms