RNA–Protein interactions for RNA: ENST00000486320.1

NEB-214, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 353 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-214ENST00000486320 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
NEB-214ENST00000486320 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
NEB-214ENST00000486320 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
NEB-214ENST00000486320 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
NEB-214ENST00000486320 FOXD1Q16676 465 aa18.49■□□□□ 0.55
NEB-214ENST00000486320 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
NEB-214ENST00000486320 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
NEB-214ENST00000486320 ADRA2BP18089 450 aa17.4■□□□□ 0.38
NEB-214ENST00000486320 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
NEB-214ENST00000486320 MSH5O43196 834 aa17.19■□□□□ 0.34
NEB-214ENST00000486320 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
NEB-214ENST00000486320 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
NEB-214ENST00000486320 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
NEB-214ENST00000486320 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
NEB-214ENST00000486320 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
NEB-214ENST00000486320 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
NEB-214ENST00000486320 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
NEB-214ENST00000486320 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
NEB-214ENST00000486320 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
NEB-214ENST00000486320 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
NEB-214ENST00000486320 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
NEB-214ENST00000486320 KCNA4P22459 653 aa14.85□□□□□ -0.03
NEB-214ENST00000486320 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
NEB-214ENST00000486320 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
NEB-214ENST00000486320 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
NEB-214ENST00000486320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
NEB-214ENST00000486320 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
NEB-214ENST00000486320 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
NEB-214ENST00000486320 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
NEB-214ENST00000486320 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
NEB-214ENST00000486320 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
NEB-214ENST00000486320 CAPN15O75808 1086 aa13.99□□□□□ -0.17
NEB-214ENST00000486320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
NEB-214ENST00000486320 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
NEB-214ENST00000486320 DSG3P32926 999 aa13.84□□□□□ -0.19
NEB-214ENST00000486320 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
NEB-214ENST00000486320 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
NEB-214ENST00000486320 APLP2Q06481 763 aa13.8□□□□□ -0.2
NEB-214ENST00000486320 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
NEB-214ENST00000486320 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
NEB-214ENST00000486320 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
NEB-214ENST00000486320 ABCB7O75027 752 aa13.72□□□□□ -0.21
NEB-214ENST00000486320 ZBTB22O15209 634 aa13.67□□□□□ -0.22
NEB-214ENST00000486320 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
NEB-214ENST00000486320 POLA2Q14181 598 aa13.46□□□□□ -0.25
NEB-214ENST00000486320 ATXN8OSP0DMR3 200 aa13.27□□□□□ -0.29
NEB-214ENST00000486320 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
NEB-214ENST00000486320 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
NEB-214ENST00000486320 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
NEB-214ENST00000486320 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
NEB-214ENST00000486320 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
NEB-214ENST00000486320 POTEHQ6S545 545 aa12.98□□□□□ -0.33
NEB-214ENST00000486320 FBLN2P98095 1184 aa12.92□□□□□ -0.34
NEB-214ENST00000486320 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
NEB-214ENST00000486320 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
NEB-214ENST00000486320 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
NEB-214ENST00000486320 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
NEB-214ENST00000486320 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
NEB-214ENST00000486320 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
NEB-214ENST00000486320 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
NEB-214ENST00000486320 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
NEB-214ENST00000486320 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
NEB-214ENST00000486320 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
NEB-214ENST00000486320 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
NEB-214ENST00000486320 CLEC11AQ9Y240 323 aa12.54□□□□□ -0.4
NEB-214ENST00000486320 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
NEB-214ENST00000486320 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
NEB-214ENST00000486320 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
NEB-214ENST00000486320 PRKAR2AP13861 404 aaKnown RBP12.37□□□□□ -0.43
NEB-214ENST00000486320 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
NEB-214ENST00000486320 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
NEB-214ENST00000486320 HAX1O00165 279 aa12.31□□□□□ -0.44
NEB-214ENST00000486320 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
NEB-214ENST00000486320 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
NEB-214ENST00000486320 EVX2Q03828 476 aa12.2□□□□□ -0.46
NEB-214ENST00000486320 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
NEB-214ENST00000486320 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
NEB-214ENST00000486320 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.48
NEB-214ENST00000486320 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
NEB-214ENST00000486320 PROM2Q8N271 834 aa12.05□□□□□ -0.48
NEB-214ENST00000486320 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
NEB-214ENST00000486320 FKBP8Q14318 412 aa11.96□□□□□ -0.49
NEB-214ENST00000486320 GABBR2O75899 941 aa11.91□□□□□ -0.5
NEB-214ENST00000486320 MNX1P50219 401 aaPredicted RBP11.88□□□□□ -0.51
NEB-214ENST00000486320 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
NEB-214ENST00000486320 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
NEB-214ENST00000486320 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
NEB-214ENST00000486320 MIER1Q8N108 512 aa11.76□□□□□ -0.53
NEB-214ENST00000486320 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
NEB-214ENST00000486320 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
NEB-214ENST00000486320 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
NEB-214ENST00000486320 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
NEB-214ENST00000486320 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
NEB-214ENST00000486320 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
NEB-214ENST00000486320 CLCN6P51797 869 aa11.67□□□□□ -0.54
NEB-214ENST00000486320 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
NEB-214ENST00000486320 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
NEB-214ENST00000486320 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
NEB-214ENST00000486320 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
NEB-214ENST00000486320 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms