RNA–Protein interactions for RNA: ENST00000486276.1

PHF11-212, Transcript of PHD finger protein 11, humanhuman

TSL 2

Gene PHF11, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-212ENST00000486276 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
PHF11-212ENST00000486276 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
PHF11-212ENST00000486276 PHF23Q9BUL5 403 aaPredicted RBP25.8■■□□□ 1.72
PHF11-212ENST00000486276 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
PHF11-212ENST00000486276 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
PHF11-212ENST00000486276 FOXD1Q16676 465 aa23.49■■□□□ 1.35
PHF11-212ENST00000486276 ADRA2BP18089 450 aa22.8■■□□□ 1.24
PHF11-212ENST00000486276 PPP6R1Q9UPN7 881 aa22.76■■□□□ 1.23
PHF11-212ENST00000486276 PIAS4Q8N2W9 510 aaPredicted RBP22.25■■□□□ 1.15
PHF11-212ENST00000486276 MSH5O43196 834 aa21.54■■□□□ 1.04
PHF11-212ENST00000486276 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
PHF11-212ENST00000486276 KCNA4P22459 653 aa20.83■□□□□ 0.93
PHF11-212ENST00000486276 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
PHF11-212ENST00000486276 MAPK8IP2Q13387 824 aaPredicted RBP20.65■□□□□ 0.9
PHF11-212ENST00000486276 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
PHF11-212ENST00000486276 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
PHF11-212ENST00000486276 NPM3O75607 178 aaKnown RBP20.28■□□□□ 0.84
PHF11-212ENST00000486276 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
PHF11-212ENST00000486276 POTEDQ86YR6 584 aa20.07■□□□□ 0.8
PHF11-212ENST00000486276 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
PHF11-212ENST00000486276 SLC4A1APQ9BWU0 796 aaKnown RBP19.87■□□□□ 0.77
PHF11-212ENST00000486276 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
PHF11-212ENST00000486276 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
PHF11-212ENST00000486276 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
PHF11-212ENST00000486276 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
PHF11-212ENST00000486276 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
PHF11-212ENST00000486276 ZBTB22O15209 634 aa19.13■□□□□ 0.65
PHF11-212ENST00000486276 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
PHF11-212ENST00000486276 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
PHF11-212ENST00000486276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
PHF11-212ENST00000486276 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
PHF11-212ENST00000486276 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
PHF11-212ENST00000486276 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
PHF11-212ENST00000486276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
PHF11-212ENST00000486276 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
PHF11-212ENST00000486276 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
PHF11-212ENST00000486276 ATXN8OSP0DMR3 200 aa18.3■□□□□ 0.52
PHF11-212ENST00000486276 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
PHF11-212ENST00000486276 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
PHF11-212ENST00000486276 APLP2Q06481 763 aa18.22■□□□□ 0.51
PHF11-212ENST00000486276 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
PHF11-212ENST00000486276 CAPN15O75808 1086 aa18.13■□□□□ 0.49
PHF11-212ENST00000486276 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
PHF11-212ENST00000486276 CACNB1Q02641 598 aaPredicted RBP18■□□□□ 0.47
PHF11-212ENST00000486276 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
PHF11-212ENST00000486276 ABCB7O75027 752 aa17.83■□□□□ 0.44
PHF11-212ENST00000486276 POLA2Q14181 598 aa17.8■□□□□ 0.44
PHF11-212ENST00000486276 DSG3P32926 999 aa17.67■□□□□ 0.42
PHF11-212ENST00000486276 FBLN2P98095 1184 aa17.48■□□□□ 0.39
PHF11-212ENST00000486276 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
PHF11-212ENST00000486276 FKBP8Q14318 412 aa17.4■□□□□ 0.38
PHF11-212ENST00000486276 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
PHF11-212ENST00000486276 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
PHF11-212ENST00000486276 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
PHF11-212ENST00000486276 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
PHF11-212ENST00000486276 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
PHF11-212ENST00000486276 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
PHF11-212ENST00000486276 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
PHF11-212ENST00000486276 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
PHF11-212ENST00000486276 SSUH2Q9Y2M2 353 aa16.8■□□□□ 0.28
PHF11-212ENST00000486276 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
PHF11-212ENST00000486276 PROM2Q8N271 834 aa16.72■□□□□ 0.27
PHF11-212ENST00000486276 FBXO3Q9UK99 471 aa16.65■□□□□ 0.26
PHF11-212ENST00000486276 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
PHF11-212ENST00000486276 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
PHF11-212ENST00000486276 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
PHF11-212ENST00000486276 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
PHF11-212ENST00000486276 SPDYE1Q8NFV5 336 aaPredicted RBP16.44■□□□□ 0.22
PHF11-212ENST00000486276 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
PHF11-212ENST00000486276 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
PHF11-212ENST00000486276 MIER1Q8N108 512 aa16.34■□□□□ 0.21
PHF11-212ENST00000486276 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
PHF11-212ENST00000486276 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
PHF11-212ENST00000486276 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
PHF11-212ENST00000486276 IFNLR1Q8IU57 520 aaPredicted RBP16.23■□□□□ 0.19
PHF11-212ENST00000486276 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
PHF11-212ENST00000486276 CHRDL2Q6WN34 429 aa16.09■□□□□ 0.17
PHF11-212ENST00000486276 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
PHF11-212ENST00000486276 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
PHF11-212ENST00000486276 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
PHF11-212ENST00000486276 AMER1Q5JTC6 1135 aaPredicted RBP16.05■□□□□ 0.16
PHF11-212ENST00000486276 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
PHF11-212ENST00000486276 SPOCK2Q92563 424 aa16.01■□□□□ 0.15
PHF11-212ENST00000486276 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
PHF11-212ENST00000486276 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHF11-212ENST00000486276 PIP4P2Q8N4L2 257 aa15.92■□□□□ 0.14
PHF11-212ENST00000486276 MNX1P50219 401 aaPredicted RBP15.87■□□□□ 0.13
PHF11-212ENST00000486276 CIZ1Q9ULV3 898 aaPredicted RBP15.85■□□□□ 0.13
PHF11-212ENST00000486276 FARP1Q9Y4F1 1045 aaPredicted RBP15.84■□□□□ 0.13
PHF11-212ENST00000486276 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
PHF11-212ENST00000486276 NUBP1P53384 320 aa15.78■□□□□ 0.12
PHF11-212ENST00000486276 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
PHF11-212ENST00000486276 PKD2Q13563 968 aa15.72■□□□□ 0.11
PHF11-212ENST00000486276 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
PHF11-212ENST00000486276 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
PHF11-212ENST00000486276 TSPYL2Q9H2G4 693 aaPredicted RBP15.69■□□□□ 0.1
PHF11-212ENST00000486276 ECM2O94769 699 aaPredicted RBP15.68■□□□□ 0.1
PHF11-212ENST00000486276 GSE1Q14687 1217 aa15.67■□□□□ 0.1
PHF11-212ENST00000486276 DCAF8L2P0C7V8 631 aa15.65■□□□□ 0.1
PHF11-212ENST00000486276 POTEHQ6S545 545 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms