RNA–Protein interactions for RNA: ENST00000486198.1

NCOA1-209, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 2

Gene NCOA1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-209ENST00000486198 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
NCOA1-209ENST00000486198 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
NCOA1-209ENST00000486198 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
NCOA1-209ENST00000486198 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
NCOA1-209ENST00000486198 FOXD1Q16676 465 aa20.33■□□□□ 0.85
NCOA1-209ENST00000486198 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
NCOA1-209ENST00000486198 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
NCOA1-209ENST00000486198 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
NCOA1-209ENST00000486198 ADRA2BP18089 450 aa19.28■□□□□ 0.68
NCOA1-209ENST00000486198 PIAS4Q8N2W9 510 aaPredicted RBP19.12■□□□□ 0.65
NCOA1-209ENST00000486198 MSH5O43196 834 aa18.93■□□□□ 0.62
NCOA1-209ENST00000486198 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
NCOA1-209ENST00000486198 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
NCOA1-209ENST00000486198 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
NCOA1-209ENST00000486198 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
NCOA1-209ENST00000486198 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
NCOA1-209ENST00000486198 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
NCOA1-209ENST00000486198 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
NCOA1-209ENST00000486198 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
NCOA1-209ENST00000486198 KCNA4P22459 653 aa16.84■□□□□ 0.29
NCOA1-209ENST00000486198 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
NCOA1-209ENST00000486198 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
NCOA1-209ENST00000486198 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
NCOA1-209ENST00000486198 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
NCOA1-209ENST00000486198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
NCOA1-209ENST00000486198 RNF39Q9H2S5 420 aa16.16■□□□□ 0.18
NCOA1-209ENST00000486198 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
NCOA1-209ENST00000486198 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
NCOA1-209ENST00000486198 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
NCOA1-209ENST00000486198 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
NCOA1-209ENST00000486198 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
NCOA1-209ENST00000486198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
NCOA1-209ENST00000486198 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
NCOA1-209ENST00000486198 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
NCOA1-209ENST00000486198 APLP2Q06481 763 aa15.54■□□□□ 0.08
NCOA1-209ENST00000486198 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
NCOA1-209ENST00000486198 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
NCOA1-209ENST00000486198 ZBTB22O15209 634 aa15.46■□□□□ 0.07
NCOA1-209ENST00000486198 CAPN15O75808 1086 aa15.46■□□□□ 0.07
NCOA1-209ENST00000486198 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
NCOA1-209ENST00000486198 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
NCOA1-209ENST00000486198 DSG3P32926 999 aa15.27■□□□□ 0.04
NCOA1-209ENST00000486198 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
NCOA1-209ENST00000486198 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
NCOA1-209ENST00000486198 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
NCOA1-209ENST00000486198 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
NCOA1-209ENST00000486198 ABCB7O75027 752 aa15.11■□□□□ 0.01
NCOA1-209ENST00000486198 POTEHQ6S545 545 aa15.02■□□□□ -0
NCOA1-209ENST00000486198 POLA2Q14181 598 aa14.99□□□□□ -0.01
NCOA1-209ENST00000486198 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
NCOA1-209ENST00000486198 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
NCOA1-209ENST00000486198 FBLN2P98095 1184 aa14.58□□□□□ -0.08
NCOA1-209ENST00000486198 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
NCOA1-209ENST00000486198 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
NCOA1-209ENST00000486198 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
NCOA1-209ENST00000486198 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
NCOA1-209ENST00000486198 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
NCOA1-209ENST00000486198 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
NCOA1-209ENST00000486198 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
NCOA1-209ENST00000486198 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
NCOA1-209ENST00000486198 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
NCOA1-209ENST00000486198 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
NCOA1-209ENST00000486198 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
NCOA1-209ENST00000486198 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
NCOA1-209ENST00000486198 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
NCOA1-209ENST00000486198 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
NCOA1-209ENST00000486198 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
NCOA1-209ENST00000486198 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
NCOA1-209ENST00000486198 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
NCOA1-209ENST00000486198 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
NCOA1-209ENST00000486198 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
NCOA1-209ENST00000486198 FKBP8Q14318 412 aa13.74□□□□□ -0.21
NCOA1-209ENST00000486198 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
NCOA1-209ENST00000486198 PROM2Q8N271 834 aa13.73□□□□□ -0.21
NCOA1-209ENST00000486198 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
NCOA1-209ENST00000486198 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
NCOA1-209ENST00000486198 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
NCOA1-209ENST00000486198 HAX1O00165 279 aa13.48□□□□□ -0.25
NCOA1-209ENST00000486198 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
NCOA1-209ENST00000486198 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
NCOA1-209ENST00000486198 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
NCOA1-209ENST00000486198 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
NCOA1-209ENST00000486198 MIER1Q8N108 512 aa13.33□□□□□ -0.28
NCOA1-209ENST00000486198 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
NCOA1-209ENST00000486198 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
NCOA1-209ENST00000486198 EVX2Q03828 476 aa13.29□□□□□ -0.28
NCOA1-209ENST00000486198 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
NCOA1-209ENST00000486198 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
NCOA1-209ENST00000486198 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
NCOA1-209ENST00000486198 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
NCOA1-209ENST00000486198 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
NCOA1-209ENST00000486198 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
NCOA1-209ENST00000486198 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
NCOA1-209ENST00000486198 CLCN6P51797 869 aa13.07□□□□□ -0.32
NCOA1-209ENST00000486198 GABBR2O75899 941 aa13.06□□□□□ -0.32
NCOA1-209ENST00000486198 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
NCOA1-209ENST00000486198 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
NCOA1-209ENST00000486198 NUBP1P53384 320 aa13.01□□□□□ -0.33
NCOA1-209ENST00000486198 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
NCOA1-209ENST00000486198 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms