RNA–Protein interactions for RNA: ENST00000486103.6

RNFT1-206, Transcript of ring finger protein, transmembrane 1, humanhuman

TSL 5

Gene RNFT1, Length 770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1-206ENST00000486103 AEBP2Q6ZN18 517 aaPredicted RBP31.87■■■□□ 2.69
RNFT1-206ENST00000486103 CHIC1Q5VXU3 224 aa30.8■■■□□ 2.52
RNFT1-206ENST00000486103 SENP3Q9H4L4 574 aaPredicted RBP27.14■■□□□ 1.94
RNFT1-206ENST00000486103 PHF23Q9BUL5 403 aaPredicted RBP27.03■■□□□ 1.92
RNFT1-206ENST00000486103 FOXD1Q16676 465 aa25.22■■□□□ 1.63
RNFT1-206ENST00000486103 PLPPR3Q6T4P5 718 aa24.87■■□□□ 1.57
RNFT1-206ENST00000486103 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
RNFT1-206ENST00000486103 ADRA2BP18089 450 aa23.96■■□□□ 1.43
RNFT1-206ENST00000486103 PIAS4Q8N2W9 510 aaPredicted RBP23.73■■□□□ 1.39
RNFT1-206ENST00000486103 MSH5O43196 834 aa23.41■■□□□ 1.34
RNFT1-206ENST00000486103 SCAF1Q9H7N4 1312 aaKnown RBP21.95■■□□□ 1.1
RNFT1-206ENST00000486103 POTEDQ86YR6 584 aa21.93■■□□□ 1.1
RNFT1-206ENST00000486103 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
RNFT1-206ENST00000486103 MAPK8IP2Q13387 824 aaPredicted RBP21.84■■□□□ 1.09
RNFT1-206ENST00000486103 DMRT2Q9Y5R5 561 aa21.59■■□□□ 1.05
RNFT1-206ENST00000486103 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
RNFT1-206ENST00000486103 NCBP3Q53F19 620 aaKnown RBP21.23■□□□□ 0.99
RNFT1-206ENST00000486103 HOXD11P31277 338 aaPredicted RBP20.99■□□□□ 0.95
RNFT1-206ENST00000486103 RNF216Q9NWF9 866 aaPredicted RBP20.99■□□□□ 0.95
RNFT1-206ENST00000486103 KCNA4P22459 653 aa20.96■□□□□ 0.95
RNFT1-206ENST00000486103 NPM3O75607 178 aaKnown RBP20.88■□□□□ 0.93
RNFT1-206ENST00000486103 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
RNFT1-206ENST00000486103 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
RNFT1-206ENST00000486103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.07■□□□□ 0.8
RNFT1-206ENST00000486103 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
RNFT1-206ENST00000486103 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
RNFT1-206ENST00000486103 SLC4A2P04920 1241 aa19.79■□□□□ 0.76
RNFT1-206ENST00000486103 CACNB1Q02641 598 aaPredicted RBP19.79■□□□□ 0.76
RNFT1-206ENST00000486103 C1QBPQ07021 282 aaKnown RBP19.76■□□□□ 0.75
RNFT1-206ENST00000486103 U3KPZ7 1027 aaPredicted RBP19.66■□□□□ 0.74
RNFT1-206ENST00000486103 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
RNFT1-206ENST00000486103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
RNFT1-206ENST00000486103 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
RNFT1-206ENST00000486103 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
RNFT1-206ENST00000486103 ZBTB22O15209 634 aa19.26■□□□□ 0.67
RNFT1-206ENST00000486103 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
RNFT1-206ENST00000486103 SAMD1Q6SPF0 538 aaPredicted RBP19.22■□□□□ 0.67
RNFT1-206ENST00000486103 CAPN15O75808 1086 aa19.21■□□□□ 0.67
RNFT1-206ENST00000486103 APLP2Q06481 763 aa19.21■□□□□ 0.67
RNFT1-206ENST00000486103 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
RNFT1-206ENST00000486103 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
RNFT1-206ENST00000486103 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
RNFT1-206ENST00000486103 DSG3P32926 999 aa18.92■□□□□ 0.62
RNFT1-206ENST00000486103 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
RNFT1-206ENST00000486103 ABCB7O75027 752 aa18.81■□□□□ 0.6
RNFT1-206ENST00000486103 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
RNFT1-206ENST00000486103 ATXN8OSP0DMR3 200 aa18.74■□□□□ 0.59
RNFT1-206ENST00000486103 POLA2Q14181 598 aa18.63■□□□□ 0.57
RNFT1-206ENST00000486103 ZBTB12Q9Y330 459 aaPredicted RBP18.29■□□□□ 0.52
RNFT1-206ENST00000486103 FBLN2P98095 1184 aa18.09■□□□□ 0.49
RNFT1-206ENST00000486103 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
RNFT1-206ENST00000486103 OSCARQ8IYS5 282 aa18■□□□□ 0.47
RNFT1-206ENST00000486103 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
RNFT1-206ENST00000486103 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
RNFT1-206ENST00000486103 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
RNFT1-206ENST00000486103 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
RNFT1-206ENST00000486103 AKT1S1Q96B36 256 aa17.75■□□□□ 0.43
RNFT1-206ENST00000486103 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
RNFT1-206ENST00000486103 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
RNFT1-206ENST00000486103 SSUH2Q9Y2M2 353 aa17.55■□□□□ 0.4
RNFT1-206ENST00000486103 CHRDL2Q6WN34 429 aa17.46■□□□□ 0.39
RNFT1-206ENST00000486103 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
RNFT1-206ENST00000486103 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
RNFT1-206ENST00000486103 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNFT1-206ENST00000486103 SPDYE1Q8NFV5 336 aaPredicted RBP17.32■□□□□ 0.36
RNFT1-206ENST00000486103 POTEHQ6S545 545 aa17.3■□□□□ 0.36
RNFT1-206ENST00000486103 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
RNFT1-206ENST00000486103 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
RNFT1-206ENST00000486103 FXR2P51116 673 aaKnown RBP eCLIP17.11■□□□□ 0.33
RNFT1-206ENST00000486103 FKBP8Q14318 412 aa17.11■□□□□ 0.33
RNFT1-206ENST00000486103 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
RNFT1-206ENST00000486103 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
RNFT1-206ENST00000486103 PROM2Q8N271 834 aa17.03■□□□□ 0.32
RNFT1-206ENST00000486103 PRKAR2AP13861 404 aaKnown RBP16.97■□□□□ 0.31
RNFT1-206ENST00000486103 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
RNFT1-206ENST00000486103 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
RNFT1-206ENST00000486103 HAX1O00165 279 aa16.73■□□□□ 0.27
RNFT1-206ENST00000486103 FARP1Q9Y4F1 1045 aaPredicted RBP16.69■□□□□ 0.26
RNFT1-206ENST00000486103 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
RNFT1-206ENST00000486103 MIER1Q8N108 512 aa16.59■□□□□ 0.25
RNFT1-206ENST00000486103 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
RNFT1-206ENST00000486103 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
RNFT1-206ENST00000486103 PLCD3Q8N3E9 789 aa16.54■□□□□ 0.24
RNFT1-206ENST00000486103 EVX2Q03828 476 aa16.51■□□□□ 0.23
RNFT1-206ENST00000486103 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
RNFT1-206ENST00000486103 NPM1P06748 294 aaKnown RBP eCLIP16.49■□□□□ 0.23
RNFT1-206ENST00000486103 SP7Q8TDD2 431 aaPredicted RBP16.47■□□□□ 0.23
RNFT1-206ENST00000486103 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.23
RNFT1-206ENST00000486103 VASPP50552 380 aaPredicted RBP16.38■□□□□ 0.21
RNFT1-206ENST00000486103 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
RNFT1-206ENST00000486103 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
RNFT1-206ENST00000486103 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
RNFT1-206ENST00000486103 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
RNFT1-206ENST00000486103 TSPYL2Q9H2G4 693 aaPredicted RBP16.21■□□□□ 0.19
RNFT1-206ENST00000486103 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
RNFT1-206ENST00000486103 GABBR2O75899 941 aa16.19■□□□□ 0.18
RNFT1-206ENST00000486103 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
RNFT1-206ENST00000486103 NUBP1P53384 320 aa16.15■□□□□ 0.18
RNFT1-206ENST00000486103 PHF12Q96QT6 1004 aa16.13■□□□□ 0.17
RNFT1-206ENST00000486103 CLCN6P51797 869 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms