RNA–Protein interactions for RNA: ENST00000485868.5

LRRTM3-203, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

TSL 5

Gene LRRTM3, Length 449 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-203ENST00000485868 AEBP2Q6ZN18 517 aaPredicted RBP37.98■■■■□ 3.67
LRRTM3-203ENST00000485868 CHIC1Q5VXU3 224 aa35.42■■■■□ 3.26
LRRTM3-203ENST00000485868 SENP3Q9H4L4 574 aaPredicted RBP32.31■■■□□ 2.76
LRRTM3-203ENST00000485868 PHF23Q9BUL5 403 aaPredicted RBP31.9■■■□□ 2.7
LRRTM3-203ENST00000485868 FOXD1Q16676 465 aa30.3■■■□□ 2.44
LRRTM3-203ENST00000485868 POTEDQ86YR6 584 aa28.82■■■□□ 2.2
LRRTM3-203ENST00000485868 MSH5O43196 834 aa28.42■■■□□ 2.14
LRRTM3-203ENST00000485868 PIAS4Q8N2W9 510 aaPredicted RBP28.13■■■□□ 2.09
LRRTM3-203ENST00000485868 PLPPR3Q6T4P5 718 aa27.99■■■□□ 2.07
LRRTM3-203ENST00000485868 PPP6R1Q9UPN7 881 aa27.98■■■□□ 2.07
LRRTM3-203ENST00000485868 ADRA2BP18089 450 aa27.83■■■□□ 2.05
LRRTM3-203ENST00000485868 MAPK8IP2Q13387 824 aaPredicted RBP25.77■■□□□ 1.72
LRRTM3-203ENST00000485868 DMRT2Q9Y5R5 561 aa25.57■■□□□ 1.68
LRRTM3-203ENST00000485868 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
LRRTM3-203ENST00000485868 CACNB1Q02641 598 aaPredicted RBP24.81■■□□□ 1.56
LRRTM3-203ENST00000485868 DCAF8L1A6NGE4 600 aa24.59■■□□□ 1.53
LRRTM3-203ENST00000485868 PPP4R3CPQ6ZMV5 832 aa24.53■■□□□ 1.52
LRRTM3-203ENST00000485868 HOXD11P31277 338 aaPredicted RBP24.42■■□□□ 1.5
LRRTM3-203ENST00000485868 RNF39Q9H2S5 420 aa24.29■■□□□ 1.48
LRRTM3-203ENST00000485868 CNKSR2Q8WXI2 1034 aa24.14■■□□□ 1.45
LRRTM3-203ENST00000485868 RNF216Q9NWF9 866 aaPredicted RBP24.06■■□□□ 1.44
LRRTM3-203ENST00000485868 C1QBPQ07021 282 aaKnown RBP23.83■■□□□ 1.41
LRRTM3-203ENST00000485868 DNAJC5BQ9UF47 199 aa23.57■■□□□ 1.36
LRRTM3-203ENST00000485868 NCBP3Q53F19 620 aaKnown RBP23.31■■□□□ 1.32
LRRTM3-203ENST00000485868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.26■■□□□ 1.31
LRRTM3-203ENST00000485868 NPM3O75607 178 aaKnown RBP23.1■■□□□ 1.29
LRRTM3-203ENST00000485868 U3KPZ7 1027 aaPredicted RBP22.76■■□□□ 1.23
LRRTM3-203ENST00000485868 SPINK5Q9NQ38 1064 aaPredicted RBP22.65■■□□□ 1.22
LRRTM3-203ENST00000485868 DSG3P32926 999 aa22.58■■□□□ 1.21
LRRTM3-203ENST00000485868 CAPN15O75808 1086 aa22.56■■□□□ 1.2
LRRTM3-203ENST00000485868 POTEHQ6S545 545 aa22.44■■□□□ 1.18
LRRTM3-203ENST00000485868 SLC4A2P04920 1241 aa22.25■■□□□ 1.15
LRRTM3-203ENST00000485868 KCNA4P22459 653 aa22.21■■□□□ 1.15
LRRTM3-203ENST00000485868 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
LRRTM3-203ENST00000485868 ABCB7O75027 752 aa22.06■■□□□ 1.12
LRRTM3-203ENST00000485868 ZNF219Q9P2Y4 722 aaPredicted RBP21.92■■□□□ 1.1
LRRTM3-203ENST00000485868 APLP2Q06481 763 aa21.85■■□□□ 1.09
LRRTM3-203ENST00000485868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.75■■□□□ 1.07
LRRTM3-203ENST00000485868 HNRNPUL2Q1KMD3 747 aaKnown RBP21.75■■□□□ 1.07
LRRTM3-203ENST00000485868 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
LRRTM3-203ENST00000485868 RBM42Q9BTD8 480 aaKnown RBP21.42■■□□□ 1.02
LRRTM3-203ENST00000485868 POLA2Q14181 598 aa21.37■■□□□ 1.01
LRRTM3-203ENST00000485868 MYCNP04198 464 aaPredicted RBP21.29■■□□□ 1
LRRTM3-203ENST00000485868 CHRDL2Q6WN34 429 aa21.27■■□□□ 1
LRRTM3-203ENST00000485868 ATF5Q9Y2D1 282 aaPredicted RBP21.02■□□□□ 0.96
LRRTM3-203ENST00000485868 AKT1S1Q96B36 256 aa20.87■□□□□ 0.93
LRRTM3-203ENST00000485868 FOXD4L1Q9NU39 408 aa20.8■□□□□ 0.92
LRRTM3-203ENST00000485868 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
LRRTM3-203ENST00000485868 SP7Q8TDD2 431 aaPredicted RBP20.76■□□□□ 0.91
LRRTM3-203ENST00000485868 REM2Q8IYK8 340 aaPredicted RBP20.74■□□□□ 0.91
LRRTM3-203ENST00000485868 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
LRRTM3-203ENST00000485868 ZBTB12Q9Y330 459 aaPredicted RBP20.73■□□□□ 0.91
LRRTM3-203ENST00000485868 PIP4P2Q8N4L2 257 aa20.69■□□□□ 0.9
LRRTM3-203ENST00000485868 PITPNM1O00562 1244 aa20.54■□□□□ 0.88
LRRTM3-203ENST00000485868 ZBTB22O15209 634 aa20.47■□□□□ 0.87
LRRTM3-203ENST00000485868 FXR2P51116 673 aaKnown RBP eCLIP20.45■□□□□ 0.86
LRRTM3-203ENST00000485868 HAX1O00165 279 aa20.44■□□□□ 0.86
LRRTM3-203ENST00000485868 EVX2Q03828 476 aa20.27■□□□□ 0.84
LRRTM3-203ENST00000485868 ATXN8OSP0DMR3 200 aa20.15■□□□□ 0.82
LRRTM3-203ENST00000485868 SPDYE2BA6NHP3 402 aa20.11■□□□□ 0.81
LRRTM3-203ENST00000485868 SPDYE6P0CI01 402 aa20.11■□□□□ 0.81
LRRTM3-203ENST00000485868 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
LRRTM3-203ENST00000485868 FBLN2P98095 1184 aa20.04■□□□□ 0.8
LRRTM3-203ENST00000485868 PRKAR2AP13861 404 aaKnown RBP19.99■□□□□ 0.79
LRRTM3-203ENST00000485868 MKRN4PQ13434 485 aaPredicted RBP19.99■□□□□ 0.79
LRRTM3-203ENST00000485868 CLEC11AQ9Y240 323 aa19.97■□□□□ 0.79
LRRTM3-203ENST00000485868 SPDYE1Q8NFV5 336 aaPredicted RBP19.89■□□□□ 0.77
LRRTM3-203ENST00000485868 ZNF692Q9BU19 519 aaPredicted RBP19.83■□□□□ 0.77
LRRTM3-203ENST00000485868 SSUH2Q9Y2M2 353 aa19.83■□□□□ 0.77
LRRTM3-203ENST00000485868 C19orf67A6NJJ6 358 aa19.81■□□□□ 0.76
LRRTM3-203ENST00000485868 CHADLQ6NUI6 762 aa19.72■□□□□ 0.75
LRRTM3-203ENST00000485868 GABBR2O75899 941 aa19.69■□□□□ 0.74
LRRTM3-203ENST00000485868 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
LRRTM3-203ENST00000485868 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
LRRTM3-203ENST00000485868 LHX8Q68G74 356 aa19.48■□□□□ 0.71
LRRTM3-203ENST00000485868 POTEIP0CG38 1075 aa19.33■□□□□ 0.68
LRRTM3-203ENST00000485868 CD44P16070 742 aaKnown RBP19.3■□□□□ 0.68
LRRTM3-203ENST00000485868 FARP1Q9Y4F1 1045 aaPredicted RBP19.29■□□□□ 0.68
LRRTM3-203ENST00000485868 CLCN6P51797 869 aa18.98■□□□□ 0.63
LRRTM3-203ENST00000485868 DCBLD2Q96PD2 775 aa18.98■□□□□ 0.63
LRRTM3-203ENST00000485868 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
LRRTM3-203ENST00000485868 CREBZFQ9NS37 354 aa18.97■□□□□ 0.63
LRRTM3-203ENST00000485868 ZNF579Q8NAF0 562 aaKnown RBP18.96■□□□□ 0.63
LRRTM3-203ENST00000485868 ZRANB1Q9UGI0 708 aa18.96■□□□□ 0.63
LRRTM3-203ENST00000485868 GALR2O43603 387 aaPredicted RBP18.85■□□□□ 0.61
LRRTM3-203ENST00000485868 STAG3Q9UJ98 1225 aa18.78■□□□□ 0.6
LRRTM3-203ENST00000485868 PHF12Q96QT6 1004 aa18.71■□□□□ 0.59
LRRTM3-203ENST00000485868 PLSCR2Q9NRY7 297 aa18.71■□□□□ 0.59
LRRTM3-203ENST00000485868 POTEB2H3BUK9 544 aa18.7■□□□□ 0.58
LRRTM3-203ENST00000485868 OTUD5Q96G74 571 aa18.69■□□□□ 0.58
LRRTM3-203ENST00000485868 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
LRRTM3-203ENST00000485868 MNX1P50219 401 aaPredicted RBP18.58■□□□□ 0.56
LRRTM3-203ENST00000485868 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
LRRTM3-203ENST00000485868 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
LRRTM3-203ENST00000485868 NPM1P06748 294 aaKnown RBP eCLIP18.48■□□□□ 0.55
LRRTM3-203ENST00000485868 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
LRRTM3-203ENST00000485868 MS4A3Q96HJ5 214 aa18.41■□□□□ 0.54
LRRTM3-203ENST00000485868 POTEMA6NI47 508 aa18.37■□□□□ 0.53
LRRTM3-203ENST00000485868 ASTLQ6HA08 431 aaPredicted RBP18.36■□□□□ 0.53
LRRTM3-203ENST00000485868 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms